RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 DGKDQ16760 1214 aa14.79□□□□□ -0.04
DDX41-215ENST00000512431 FRMPD2Q68DX3 1309 aaPredicted RBP14.79□□□□□ -0.04
DDX41-215ENST00000512431 RASGRP2Q7LDG7 609 aa14.79□□□□□ -0.04
DDX41-215ENST00000512431 CHST3Q7LGC8 479 aa14.79□□□□□ -0.04
DDX41-215ENST00000512431 ADHFE1Q8IWW8 467 aa14.79□□□□□ -0.04
DDX41-215ENST00000512431 MYOCDQ8IZQ8 938 aa14.79□□□□□ -0.04
DDX41-215ENST00000512431 PIEZO1Q92508 2521 aa14.79□□□□□ -0.04
DDX41-215ENST00000512431 CTAGE1Q96RT6 745 aa14.79□□□□□ -0.04
DDX41-215ENST00000512431 ALG1Q9BT22 464 aa14.79□□□□□ -0.04
DDX41-215ENST00000512431 HDAC6Q9UBN7 1215 aa14.79□□□□□ -0.04
DDX41-215ENST00000512431 EMSYQ7Z589 1322 aa14.78□□□□□ -0.04
DDX41-215ENST00000512431 NCK2O43639 380 aa14.78□□□□□ -0.04
DDX41-215ENST00000512431 LGR5O75473 907 aa14.78□□□□□ -0.04
DDX41-215ENST00000512431 ARIH2O95376 493 aa14.78□□□□□ -0.04
DDX41-215ENST00000512431 ZP2Q05996 745 aa14.78□□□□□ -0.04
DDX41-215ENST00000512431 GPM6BQ13491 265 aa14.78□□□□□ -0.04
DDX41-215ENST00000512431 LY6KQ17RY6 165 aa14.78□□□□□ -0.04
DDX41-215ENST00000512431 EPC2Q52LR7 807 aa14.78□□□□□ -0.04
DDX41-215ENST00000512431 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.78□□□□□ -0.04
DDX41-215ENST00000512431 SEPT14Q6ZU15 432 aa14.78□□□□□ -0.04
DDX41-215ENST00000512431 POP1Q99575 1024 aaKnown RBP14.78□□□□□ -0.04
DDX41-215ENST00000512431 NSUN3Q9H649 340 aaKnown RBP14.78□□□□□ -0.04
DDX41-215ENST00000512431 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.78□□□□□ -0.04
DDX41-215ENST00000512431 TET1Q8NFU7 2136 aa14.77□□□□□ -0.04
DDX41-215ENST00000512431 LCTP09848 1927 aa14.77□□□□□ -0.04
DDX41-215ENST00000512431 PTPRSQ13332 1948 aa14.77□□□□□ -0.04
DDX41-215ENST00000512431 H3BNC9 293 aa14.77□□□□□ -0.05
DDX41-215ENST00000512431 TOP1P11387 765 aaKnown RBP14.77□□□□□ -0.05
DDX41-215ENST00000512431 PSEN2P49810 448 aa14.77□□□□□ -0.05
DDX41-215ENST00000512431 HTRA4P83105 476 aaPredicted RBP14.77□□□□□ -0.05
DDX41-215ENST00000512431 CTDSPL2Q05D32 466 aa14.77□□□□□ -0.05
DDX41-215ENST00000512431 TCTN1Q2MV58 587 aa14.77□□□□□ -0.05
DDX41-215ENST00000512431 TCEAL5Q5H9L2 206 aa14.77□□□□□ -0.05
DDX41-215ENST00000512431 ZNF618Q5T7W0 954 aa14.77□□□□□ -0.05
DDX41-215ENST00000512431 CCDC62Q6P9F0 684 aa14.77□□□□□ -0.05
DDX41-215ENST00000512431 HFE2Q6ZVN8 426 aa14.77□□□□□ -0.05
DDX41-215ENST00000512431 KAT2BQ92831 832 aa14.77□□□□□ -0.05
DDX41-215ENST00000512431 YME1L1Q96TA2 773 aa14.77□□□□□ -0.05
DDX41-215ENST00000512431 SEC62Q99442 399 aaKnown RBP14.77□□□□□ -0.05
DDX41-215ENST00000512431 TOMM22Q9NS69 142 aa14.77□□□□□ -0.05
DDX41-215ENST00000512431 CLDND1Q9NY35 253 aa14.77□□□□□ -0.05
DDX41-215ENST00000512431 SIP14410 1827 aa14.76□□□□□ -0.05
DDX41-215ENST00000512431 WDR19Q8NEZ3 1342 aa14.76□□□□□ -0.05
DDX41-215ENST00000512431 C19orf67A6NJJ6 358 aa14.76□□□□□ -0.05
DDX41-215ENST00000512431 NOVP48745 357 aa14.76□□□□□ -0.05
DDX41-215ENST00000512431 HNRNPUQ00839 825 aaKnown RBP eCLIP14.76□□□□□ -0.05
DDX41-215ENST00000512431 ARHGAP1Q07960 439 aa14.76□□□□□ -0.05
DDX41-215ENST00000512431 MFSD10Q14728 455 aa14.76□□□□□ -0.05
DDX41-215ENST00000512431 STXBP2Q15833 593 aa14.76□□□□□ -0.05
DDX41-215ENST00000512431 DHX37Q8IY37 1157 aaKnown RBP14.76□□□□□ -0.05
DDX41-215ENST00000512431 RGS22Q8NE09 1264 aa14.76□□□□□ -0.05
DDX41-215ENST00000512431 SP7Q8TDD2 431 aaPredicted RBP14.76□□□□□ -0.05
DDX41-215ENST00000512431 FSD1Q9BTV5 496 aa14.76□□□□□ -0.05
DDX41-215ENST00000512431 INCENPQ9NQS7 918 aa14.76□□□□□ -0.05
DDX41-215ENST00000512431 TRIP12Q14669 1992 aaPredicted RBP14.75□□□□□ -0.05
DDX41-215ENST00000512431 RSPH10B2B2RC85 870 aa14.75□□□□□ -0.05
DDX41-215ENST00000512431 RSPH10BP0C881 870 aa14.75□□□□□ -0.05
DDX41-215ENST00000512431 IRS1P35568 1242 aa14.75□□□□□ -0.05
DDX41-215ENST00000512431 LAMC2Q13753 1193 aa14.75□□□□□ -0.05
DDX41-215ENST00000512431 KIAA0753Q2KHM9 967 aa14.75□□□□□ -0.05
DDX41-215ENST00000512431 USH1GQ495M9 461 aa14.75□□□□□ -0.05
DDX41-215ENST00000512431 TSHZ3Q63HK5 1081 aa14.75□□□□□ -0.05
DDX41-215ENST00000512431 TMEM192Q8IY95 271 aa14.75□□□□□ -0.05
DDX41-215ENST00000512431 DBF4BQ8NFT6 615 aa14.75□□□□□ -0.05
DDX41-215ENST00000512431 NSUN6Q8TEA1 469 aaKnown RBP14.75□□□□□ -0.05
DDX41-215ENST00000512431 IWS1Q96ST2 819 aa14.75□□□□□ -0.05
DDX41-215ENST00000512431 PRRX2Q99811 253 aa14.75□□□□□ -0.05
DDX41-215ENST00000512431 TMEM47Q9BQJ4 181 aa14.75□□□□□ -0.05
DDX41-215ENST00000512431 MAF1Q9H063 256 aa14.75□□□□□ -0.05
DDX41-215ENST00000512431 ORC4O43929 436 aa14.74□□□□□ -0.05
DDX41-215ENST00000512431 ST18O60284 1047 aa14.74□□□□□ -0.05
DDX41-215ENST00000512431 UPP2O95045 317 aa14.74□□□□□ -0.05
DDX41-215ENST00000512431 THPOP40225 353 aa14.74□□□□□ -0.05
DDX41-215ENST00000512431 PTPN5P54829 565 aa14.74□□□□□ -0.05
DDX41-215ENST00000512431 TRIM71Q2Q1W2 868 aaKnown RBP14.74□□□□□ -0.05
DDX41-215ENST00000512431 RRP12Q5JTH9 1297 aaKnown RBP14.74□□□□□ -0.05
DDX41-215ENST00000512431 FBXO11Q86XK2 927 aa14.74□□□□□ -0.05
DDX41-215ENST00000512431 F2P00734 622 aa14.73□□□□□ -0.05
DDX41-215ENST00000512431 PDHBP11177 359 aa14.73□□□□□ -0.05
DDX41-215ENST00000512431 MBTPS1Q14703 1052 aa14.73□□□□□ -0.05
DDX41-215ENST00000512431 COL19A1Q14993 1142 aa14.73□□□□□ -0.05
DDX41-215ENST00000512431 PKN1Q16512 942 aa14.73□□□□□ -0.05
DDX41-215ENST00000512431 HERC4Q5GLZ8 1057 aaPredicted RBP14.73□□□□□ -0.05
DDX41-215ENST00000512431 ZMYM1Q5SVZ6 1142 aa14.73□□□□□ -0.05
DDX41-215ENST00000512431 TRAF7Q6Q0C0 670 aa14.73□□□□□ -0.05
DDX41-215ENST00000512431 RPAINQ86UA6 219 aa14.73□□□□□ -0.05
DDX41-215ENST00000512431 PPTC7Q8NI37 304 aa14.73□□□□□ -0.05
DDX41-215ENST00000512431 SEPT8Q92599 483 aa14.73□□□□□ -0.05
DDX41-215ENST00000512431 TOP1MTQ969P6 601 aa14.73□□□□□ -0.05
DDX41-215ENST00000512431 EMID1Q96A84 441 aaPredicted RBP14.73□□□□□ -0.05
DDX41-215ENST00000512431 TAAR1Q96RJ0 339 aa14.73□□□□□ -0.05
DDX41-215ENST00000512431 RMDN3Q96TC7 470 aa14.73□□□□□ -0.05
DDX41-215ENST00000512431 MUTYHQ9UIF7 546 aa14.73□□□□□ -0.05
DDX41-215ENST00000512431 ANAPC4Q9UJX5 808 aa14.73□□□□□ -0.05
DDX41-215ENST00000512431 MRVI1Q9Y6F6 885 aa14.73□□□□□ -0.05
DDX41-215ENST00000512431 HAS3O00219 553 aa14.72□□□□□ -0.05
DDX41-215ENST00000512431 EIF3JO75822 258 aaKnown RBP14.72□□□□□ -0.05
DDX41-215ENST00000512431 ZNF286BP0CG31 522 aa14.72□□□□□ -0.05
DDX41-215ENST00000512431 ZNF200P98182 395 aaPredicted RBP14.72□□□□□ -0.05
DDX41-215ENST00000512431 ZNF543Q08ER8 600 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms