RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 CYP3A7-CYP3A51PA0A087WV96 503 aa10.27□□□□□ -0.76
CPNE4-210ENST00000512332 NPR1P16066 1061 aa10.27□□□□□ -0.76
CPNE4-210ENST00000512332 CYP3A7P24462 503 aa10.27□□□□□ -0.76
CPNE4-210ENST00000512332 ALDH1B1P30837 517 aa10.27□□□□□ -0.76
CPNE4-210ENST00000512332 CYP2C19P33261 490 aa10.27□□□□□ -0.76
CPNE4-210ENST00000512332 MCTP2Q6DN12 878 aa10.27□□□□□ -0.76
CPNE4-210ENST00000512332 APOBEC3HQ6NTF7 200 aaKnown RBP10.27□□□□□ -0.76
CPNE4-210ENST00000512332 CDC42EP5Q6NZY7 148 aa10.27□□□□□ -0.76
CPNE4-210ENST00000512332 MOXD1Q6UVY6 613 aa10.27□□□□□ -0.76
CPNE4-210ENST00000512332 LRRC55Q6ZSA7 311 aa10.27□□□□□ -0.76
CPNE4-210ENST00000512332 KIAA1328Q86T90 577 aa10.27□□□□□ -0.76
CPNE4-210ENST00000512332 DDX12PQ92771 950 aa10.27□□□□□ -0.76
CPNE4-210ENST00000512332 TEKT1Q969V4 418 aa10.27□□□□□ -0.76
CPNE4-210ENST00000512332 PNKPQ96T60 521 aa10.27□□□□□ -0.76
CPNE4-210ENST00000512332 DHX36Q9H2U1 1008 aaKnown RBP10.27□□□□□ -0.76
CPNE4-210ENST00000512332 PSTPIP2Q9H939 334 aa10.27□□□□□ -0.76
CPNE4-210ENST00000512332 PCDHA12Q9UN75 941 aa10.27□□□□□ -0.76
CPNE4-210ENST00000512332 KDM3AQ9Y4C1 1321 aa10.27□□□□□ -0.76
CPNE4-210ENST00000512332 POTEMA6NI47 508 aa10.27□□□□□ -0.77
CPNE4-210ENST00000512332 NPM3O75607 178 aaKnown RBP10.27□□□□□ -0.77
CPNE4-210ENST00000512332 MCM3P25205 808 aa10.27□□□□□ -0.77
CPNE4-210ENST00000512332 TNNI2P48788 182 aa10.27□□□□□ -0.77
CPNE4-210ENST00000512332 VAV2P52735 878 aa10.27□□□□□ -0.77
CPNE4-210ENST00000512332 KIF5AQ12840 1032 aa10.27□□□□□ -0.77
CPNE4-210ENST00000512332 TAF3Q5VWG9 929 aa10.27□□□□□ -0.77
CPNE4-210ENST00000512332 DNAJC19Q96DA6 116 aa10.27□□□□□ -0.77
CPNE4-210ENST00000512332 CCDC42Q96M95 316 aa10.27□□□□□ -0.77
CPNE4-210ENST00000512332 MBOAT7Q96N66 472 aa10.27□□□□□ -0.77
CPNE4-210ENST00000512332 TSG101Q99816 390 aa10.27□□□□□ -0.77
CPNE4-210ENST00000512332 NUDT12Q9BQG2 462 aa10.27□□□□□ -0.77
CPNE4-210ENST00000512332 BMP2KQ9NSY1 1161 aaPredicted RBP10.27□□□□□ -0.77
CPNE4-210ENST00000512332 TRIM10Q9UDY6 481 aa10.27□□□□□ -0.77
CPNE4-210ENST00000512332 ZHX1Q9UKY1 873 aaPredicted RBP10.27□□□□□ -0.77
CPNE4-210ENST00000512332 TARSL2A2RTX5 802 aaKnown RBP10.26□□□□□ -0.77
CPNE4-210ENST00000512332 RIMBP2O15034 1052 aa10.26□□□□□ -0.77
CPNE4-210ENST00000512332 PRLRP16471 622 aa10.26□□□□□ -0.77
CPNE4-210ENST00000512332 KLK7P49862 253 aa10.26□□□□□ -0.77
CPNE4-210ENST00000512332 FKBP1AP62942 108 aaKnown RBP10.26□□□□□ -0.77
CPNE4-210ENST00000512332 HDLBPQ00341 1268 aaKnown RBP10.26□□□□□ -0.77
CPNE4-210ENST00000512332 FKBP3Q00688 224 aaKnown RBP10.26□□□□□ -0.77
CPNE4-210ENST00000512332 CKAP4Q07065 602 aaKnown RBP10.26□□□□□ -0.77
CPNE4-210ENST00000512332 GPS2Q13227 327 aa10.26□□□□□ -0.77
CPNE4-210ENST00000512332 SPA17Q15506 151 aa10.26□□□□□ -0.77
CPNE4-210ENST00000512332 ZCWPW2Q504Y3 356 aa10.26□□□□□ -0.77
CPNE4-210ENST00000512332 DYMQ7RTS9 669 aa10.26□□□□□ -0.77
CPNE4-210ENST00000512332 MYOCDQ8IZQ8 938 aa10.26□□□□□ -0.77
CPNE4-210ENST00000512332 NLGN1Q8N2Q7 840 aa10.26□□□□□ -0.77
CPNE4-210ENST00000512332 HPS3Q969F9 1004 aa10.26□□□□□ -0.77
CPNE4-210ENST00000512332 PCMTD1Q96MG8 357 aaPredicted RBP10.26□□□□□ -0.77
CPNE4-210ENST00000512332 ZDHHC15Q96MV8 337 aa10.26□□□□□ -0.77
CPNE4-210ENST00000512332 LACRTQ9GZZ8 138 aa10.26□□□□□ -0.77
CPNE4-210ENST00000512332 NYAP2Q9P242 653 aa10.26□□□□□ -0.77
CPNE4-210ENST00000512332 AFF2P51816 1311 aa10.26□□□□□ -0.77
CPNE4-210ENST00000512332 USP17L10C9JJH3 530 aa10.26□□□□□ -0.77
CPNE4-210ENST00000512332 USO1O60763 962 aaKnown RBP10.26□□□□□ -0.77
CPNE4-210ENST00000512332 MARSP56192 900 aaKnown RBP10.26□□□□□ -0.77
CPNE4-210ENST00000512332 EIF6P56537 245 aaKnown RBP10.26□□□□□ -0.77
CPNE4-210ENST00000512332 TTBK2Q6IQ55 1244 aa10.26□□□□□ -0.77
CPNE4-210ENST00000512332 KCNK18Q7Z418 384 aa10.26□□□□□ -0.77
CPNE4-210ENST00000512332 PODNQ7Z5L7 613 aa10.26□□□□□ -0.77
CPNE4-210ENST00000512332 DCAF4Q8WV16 495 aa10.26□□□□□ -0.77
CPNE4-210ENST00000512332 EEF2KMTQ96G04 330 aa10.26□□□□□ -0.77
CPNE4-210ENST00000512332 CEP63Q96MT8 703 aa10.26□□□□□ -0.77
CPNE4-210ENST00000512332 NUCKS1Q9H1E3 243 aaKnown RBP10.26□□□□□ -0.77
CPNE4-210ENST00000512332 KANSL2Q9H9L4 492 aa10.26□□□□□ -0.77
CPNE4-210ENST00000512332 KCNMB3Q9NPA1 279 aa10.26□□□□□ -0.77
CPNE4-210ENST00000512332 RCCD1A6NED2 376 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 F8W031 263 aaPredicted RBP10.25□□□□□ -0.77
CPNE4-210ENST00000512332 GNA14O95837 355 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 ATP1A1P05023 1023 aaKnown RBP10.25□□□□□ -0.77
CPNE4-210ENST00000512332 OAS2P29728 719 aaKnown RBP10.25□□□□□ -0.77
CPNE4-210ENST00000512332 USP14P54578 494 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 VSNL1P62760 191 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 ITIH3Q06033 890 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 AP3B2Q13367 1082 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 UBE2SQ16763 222 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 MEX3CQ5U5Q3 659 aaKnown RBP10.25□□□□□ -0.77
CPNE4-210ENST00000512332 NCAPH2Q6IBW4 605 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 CLEC10AQ8IUN9 316 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 TXLNBQ8N3L3 684 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 NOA1Q8NC60 698 aaKnown RBP10.25□□□□□ -0.77
CPNE4-210ENST00000512332 TRIM58Q8NG06 486 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 SYN2Q92777 582 aaPredicted RBP10.25□□□□□ -0.77
CPNE4-210ENST00000512332 IDI2Q9BXS1 227 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 ABCB6Q9NP58 842 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.25□□□□□ -0.77
CPNE4-210ENST00000512332 ARHGAP20Q9P2F6 1191 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 JRKLQ9Y4A0 524 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 NRXN2Q9P2S2 1712 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 SSU72P8A0A1W2PR75 194 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 CCDC66A2RUB6 948 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 ZNF263O14978 683 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 TBX3O15119 743 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 NKRFO15226 690 aaKnown RBP eCLIP10.25□□□□□ -0.77
CPNE4-210ENST00000512332 EIF3JO75822 258 aaKnown RBP10.25□□□□□ -0.77
CPNE4-210ENST00000512332 RHOXF2BP0C7M4 288 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 IDEP14735 1019 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 PDE6BP35913 854 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 COASYQ13057 564 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 MAPK8IP2Q13387 824 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms