RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 MEIS1O00470 390 aa5.43□□□□□ -1.54
TOPBP1-208ENST00000511439 KLF4O43474 513 aa5.43□□□□□ -1.54
TOPBP1-208ENST00000511439 FOXD2O60548 495 aaPredicted RBP5.43□□□□□ -1.54
TOPBP1-208ENST00000511439 CDR1P51861 262 aa5.43□□□□□ -1.54
TOPBP1-208ENST00000511439 RAB3GAP1Q15042 981 aa5.43□□□□□ -1.54
TOPBP1-208ENST00000511439 HLA-DQA1Q5Y7H0 255 aa5.43□□□□□ -1.54
TOPBP1-208ENST00000511439 ANKS3Q6ZW76 656 aa5.43□□□□□ -1.54
TOPBP1-208ENST00000511439 TMC6Q7Z403 805 aa5.43□□□□□ -1.54
TOPBP1-208ENST00000511439 C7orf61Q8IZ16 206 aa5.43□□□□□ -1.54
TOPBP1-208ENST00000511439 NAT16Q8N8M0 369 aa5.43□□□□□ -1.54
TOPBP1-208ENST00000511439 NUP43Q8NFH3 380 aa5.43□□□□□ -1.54
TOPBP1-208ENST00000511439 TNFRSF12AQ9NP84 129 aa5.43□□□□□ -1.54
TOPBP1-208ENST00000511439 KLHL14Q9P2G3 628 aa5.43□□□□□ -1.54
TOPBP1-208ENST00000511439 SCAF11Q99590 1463 aaKnown RBP5.43□□□□□ -1.54
TOPBP1-208ENST00000511439 NLRP1Q9C000 1473 aa5.43□□□□□ -1.54
TOPBP1-208ENST00000511439 MSH6P52701 1360 aa5.42□□□□□ -1.54
TOPBP1-208ENST00000511439 UNC13BO14795 1591 aa5.42□□□□□ -1.54
TOPBP1-208ENST00000511439 TIAM1Q13009 1591 aa5.42□□□□□ -1.54
TOPBP1-208ENST00000511439 A0A0G2JLL6 359 aaPredicted RBP5.42□□□□□ -1.54
TOPBP1-208ENST00000511439 FAM86C2PA6NEL3 165 aa5.42□□□□□ -1.54
TOPBP1-208ENST00000511439 SDHBP21912 280 aa5.42□□□□□ -1.54
TOPBP1-208ENST00000511439 CTSKP43235 329 aa5.42□□□□□ -1.54
TOPBP1-208ENST00000511439 NOP2P46087 812 aaKnown RBP5.42□□□□□ -1.54
TOPBP1-208ENST00000511439 PMS1P54277 932 aaKnown RBP5.42□□□□□ -1.54
TOPBP1-208ENST00000511439 CBX2Q14781 532 aaPredicted RBP5.42□□□□□ -1.54
TOPBP1-208ENST00000511439 CYP2R1Q6VVX0 501 aa5.42□□□□□ -1.54
TOPBP1-208ENST00000511439 LDHDQ86WU2 507 aa5.42□□□□□ -1.54
TOPBP1-208ENST00000511439 FAM129CQ86XR2 697 aa5.42□□□□□ -1.54
TOPBP1-208ENST00000511439 CCDC144CPQ8IYA2 1237 aa5.42□□□□□ -1.54
TOPBP1-208ENST00000511439 NLGN1Q8N2Q7 840 aa5.42□□□□□ -1.54
TOPBP1-208ENST00000511439 CXorf38Q8TB03 319 aa5.42□□□□□ -1.54
TOPBP1-208ENST00000511439 PANK1Q8TE04 598 aa5.42□□□□□ -1.54
TOPBP1-208ENST00000511439 HIRIP3Q9BW71 556 aaPredicted RBP5.42□□□□□ -1.54
TOPBP1-208ENST00000511439 PHAXQ9H814 394 aaKnown RBP5.42□□□□□ -1.54
TOPBP1-208ENST00000511439 AP5S1Q9NUS5 200 aa5.42□□□□□ -1.54
TOPBP1-208ENST00000511439 ACTR10Q9NZ32 417 aa5.42□□□□□ -1.54
TOPBP1-208ENST00000511439 PPP1R1BQ9UD71 204 aaPredicted RBP5.42□□□□□ -1.54
TOPBP1-208ENST00000511439 ZNF214Q9UL59 606 aaPredicted RBP5.42□□□□□ -1.54
TOPBP1-208ENST00000511439 MINPP1Q9UNW1 487 aa5.42□□□□□ -1.54
TOPBP1-208ENST00000511439 NUP153P49790 1475 aaKnown RBP5.42□□□□□ -1.54
TOPBP1-208ENST00000511439 MYO5CQ9NQX4 1742 aa5.42□□□□□ -1.54
TOPBP1-208ENST00000511439 RTEL1-TNFRSF6BF6WH68 1400 aa5.41□□□□□ -1.54
TOPBP1-208ENST00000511439 NUDT19A8MXV4 375 aa5.41□□□□□ -1.54
TOPBP1-208ENST00000511439 RBM10P98175 930 aaKnown RBP5.41□□□□□ -1.54
TOPBP1-208ENST00000511439 CAP1Q01518 475 aa5.41□□□□□ -1.54
TOPBP1-208ENST00000511439 RAB33AQ14088 237 aa5.41□□□□□ -1.54
TOPBP1-208ENST00000511439 ANKRD39Q53RE8 183 aa5.41□□□□□ -1.54
TOPBP1-208ENST00000511439 ZC3H14Q6PJT7 736 aaKnown RBP5.41□□□□□ -1.54
TOPBP1-208ENST00000511439 CRTC3Q6UUV7 619 aa5.41□□□□□ -1.54
TOPBP1-208ENST00000511439 PPFIBP1Q86W92 1011 aa5.41□□□□□ -1.54
TOPBP1-208ENST00000511439 JAMLQ86YT9 394 aa5.41□□□□□ -1.54
TOPBP1-208ENST00000511439 CKAP2LQ8IYA6 745 aa5.41□□□□□ -1.54
TOPBP1-208ENST00000511439 HNRNPLLQ8WVV9 542 aaKnown RBP5.41□□□□□ -1.54
TOPBP1-208ENST00000511439 UBXN4Q92575 508 aa5.41□□□□□ -1.54
TOPBP1-208ENST00000511439 IMPACTQ9P2X3 320 aa5.41□□□□□ -1.54
TOPBP1-208ENST00000511439 TRPC5Q9UL62 973 aaPredicted RBP5.41□□□□□ -1.54
TOPBP1-208ENST00000511439 DIP2AQ14689 1571 aa5.41□□□□□ -1.54
TOPBP1-208ENST00000511439 ARHGAP5Q13017 1502 aa5.4□□□□□ -1.54
TOPBP1-208ENST00000511439 C9IYK1 514 aa5.4□□□□□ -1.54
TOPBP1-208ENST00000511439 PFKLP17858 780 aa5.4□□□□□ -1.54
TOPBP1-208ENST00000511439 MAPKAPK2P49137 400 aa5.4□□□□□ -1.54
TOPBP1-208ENST00000511439 R3HDM1Q15032 1099 aaKnown RBP5.4□□□□□ -1.54
TOPBP1-208ENST00000511439 TARBP2Q15633 366 aaKnown RBP5.4□□□□□ -1.54
TOPBP1-208ENST00000511439 NOL9Q5SY16 702 aaKnown RBP5.4□□□□□ -1.54
TOPBP1-208ENST00000511439 NBPF6Q5VWK0 638 aa5.4□□□□□ -1.54
TOPBP1-208ENST00000511439 KRTAP5-3Q6L8H2 238 aa5.4□□□□□ -1.54
TOPBP1-208ENST00000511439 RPTNQ6XPR3 784 aa5.4□□□□□ -1.54
TOPBP1-208ENST00000511439 IGDCC3Q8IVU1 814 aa5.4□□□□□ -1.54
TOPBP1-208ENST00000511439 TMEFF1Q8IYR6 380 aa5.4□□□□□ -1.54
TOPBP1-208ENST00000511439 LINC01356Q8N9X3 169 aa5.4□□□□□ -1.54
TOPBP1-208ENST00000511439 NBPF4Q96M43 638 aa5.4□□□□□ -1.54
TOPBP1-208ENST00000511439 XYLT2Q9H1B5 865 aa5.4□□□□□ -1.54
TOPBP1-208ENST00000511439 EPB41L4AQ9HCS5 686 aaPredicted RBP5.4□□□□□ -1.54
TOPBP1-208ENST00000511439 LUC7LQ9NQ29 371 aaKnown RBP5.4□□□□□ -1.54
TOPBP1-208ENST00000511439 PCDHB10Q9UN67 800 aa5.4□□□□□ -1.54
TOPBP1-208ENST00000511439 R3HCC1Q9Y3T6 440 aaKnown RBP5.4□□□□□ -1.54
TOPBP1-208ENST00000511439 PCDHA5Q9Y5H7 936 aa5.4□□□□□ -1.54
TOPBP1-208ENST00000511439 PRDM15P57071 1507 aaPredicted RBP5.39□□□□□ -1.55
TOPBP1-208ENST00000511439 A0A1W2PQJ5 194 aa5.39□□□□□ -1.55
TOPBP1-208ENST00000511439 BUB1BO60566 1050 aaPredicted RBP5.39□□□□□ -1.55
TOPBP1-208ENST00000511439 GSTM1P09488 218 aa5.39□□□□□ -1.55
TOPBP1-208ENST00000511439 CORO7P57737 925 aa5.39□□□□□ -1.55
TOPBP1-208ENST00000511439 SLC7A5Q01650 507 aa5.39□□□□□ -1.55
TOPBP1-208ENST00000511439 FXNQ16595 210 aa5.39□□□□□ -1.55
TOPBP1-208ENST00000511439 RTP2Q5QGT7 225 aa5.39□□□□□ -1.55
TOPBP1-208ENST00000511439 SOGA3Q5TF21 947 aa5.39□□□□□ -1.55
TOPBP1-208ENST00000511439 CELF2-AS1Q8N7Q2 184 aa5.39□□□□□ -1.55
TOPBP1-208ENST00000511439 MICAL1Q8TDZ2 1067 aa5.39□□□□□ -1.55
TOPBP1-208ENST00000511439 KLHL6Q8WZ60 621 aa5.39□□□□□ -1.55
TOPBP1-208ENST00000511439 PWWP2AQ96N64 755 aa5.39□□□□□ -1.55
TOPBP1-208ENST00000511439 JMJD8Q96S16 334 aa5.39□□□□□ -1.55
TOPBP1-208ENST00000511439 DNAJC2Q99543 621 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-208ENST00000511439 SF3B6Q9Y3B4 125 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-208ENST00000511439 KIDINS220Q9ULH0 1771 aa5.39□□□□□ -1.55
TOPBP1-208ENST00000511439 PZPP20742 1482 aa5.39□□□□□ -1.55
TOPBP1-208ENST00000511439 NKTRP30414 1462 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-208ENST00000511439 ARHGAP23Q9P227 1491 aa5.39□□□□□ -1.55
TOPBP1-208ENST00000511439 ADGBQ8N7X0 1667 aa5.38□□□□□ -1.55
TOPBP1-208ENST00000511439 ZC3H12DA2A288 527 aaKnown RBP5.38□□□□□ -1.55
TOPBP1-208ENST00000511439 OTOL1A6NHN0 477 aaPredicted RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms