RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 CLK2P49760 499 aaKnown RBP10.25□□□□□ -0.77
PDGFRA-208ENST00000509490 HGSNATQ68CP4 663 aa10.25□□□□□ -0.77
PDGFRA-208ENST00000509490 SPATA4Q8NEY3 305 aa10.25□□□□□ -0.77
PDGFRA-208ENST00000509490 RAD54LQ92698 747 aa10.25□□□□□ -0.77
PDGFRA-208ENST00000509490 ALS2CR12Q96Q35 445 aa10.25□□□□□ -0.77
PDGFRA-208ENST00000509490 PAGR1Q9BTK6 254 aa10.25□□□□□ -0.77
PDGFRA-208ENST00000509490 MKNK2Q9HBH9 465 aa10.25□□□□□ -0.77
PDGFRA-208ENST00000509490 BTAF1O14981 1849 aa10.25□□□□□ -0.77
PDGFRA-208ENST00000509490 SMCO2A6NFE2 343 aa10.24□□□□□ -0.77
PDGFRA-208ENST00000509490 MYMKA6NI61 221 aa10.24□□□□□ -0.77
PDGFRA-208ENST00000509490 EPHB4P54760 987 aa10.24□□□□□ -0.77
PDGFRA-208ENST00000509490 NAPAP54920 295 aa10.24□□□□□ -0.77
PDGFRA-208ENST00000509490 LARP4BQ92615 738 aaKnown RBP10.24□□□□□ -0.77
PDGFRA-208ENST00000509490 CCDC102AQ96A19 550 aa10.24□□□□□ -0.77
PDGFRA-208ENST00000509490 OSBPL9Q96SU4 736 aa10.24□□□□□ -0.77
PDGFRA-208ENST00000509490 IFIH1Q9BYX4 1025 aaKnown RBP10.24□□□□□ -0.77
PDGFRA-208ENST00000509490 RAB34Q9BZG1 259 aa10.24□□□□□ -0.77
PDGFRA-208ENST00000509490 GDF3Q9NR23 364 aa10.24□□□□□ -0.77
PDGFRA-208ENST00000509490 CEP72Q9P209 647 aa10.24□□□□□ -0.77
PDGFRA-208ENST00000509490 THSD7AQ9UPZ6 1657 aa10.24□□□□□ -0.77
PDGFRA-208ENST00000509490 USP17L3A6NCW0 530 aa10.24□□□□□ -0.77
PDGFRA-208ENST00000509490 USP17L4A6NCW7 530 aa10.24□□□□□ -0.77
PDGFRA-208ENST00000509490 FCER1AP12319 257 aa10.24□□□□□ -0.77
PDGFRA-208ENST00000509490 KLK7P49862 253 aa10.24□□□□□ -0.77
PDGFRA-208ENST00000509490 PPFIA1Q13136 1202 aa10.24□□□□□ -0.77
PDGFRA-208ENST00000509490 GRAPQ13588 217 aa10.24□□□□□ -0.77
PDGFRA-208ENST00000509490 ASPRV1Q53RT3 343 aa10.24□□□□□ -0.77
PDGFRA-208ENST00000509490 TPTE2Q6XPS3 522 aa10.24□□□□□ -0.77
PDGFRA-208ENST00000509490 USP17L1Q7RTZ2 530 aa10.24□□□□□ -0.77
PDGFRA-208ENST00000509490 REXO1Q8N1G1 1221 aaKnown RBP10.24□□□□□ -0.77
PDGFRA-208ENST00000509490 GOLGA6L1Q8N7Z2 621 aa10.24□□□□□ -0.77
PDGFRA-208ENST00000509490 GRAPLQ8TC17 118 aaPredicted RBP10.24□□□□□ -0.77
PDGFRA-208ENST00000509490 LRWD1Q9UFC0 647 aa10.24□□□□□ -0.77
PDGFRA-208ENST00000509490 SWAP70Q9UH65 585 aa10.24□□□□□ -0.77
PDGFRA-208ENST00000509490 CCNT1O60563 726 aaKnown RBP10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 SRGAP2O75044 1071 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 MYBP10242 640 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 MYBL2P10244 700 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 GCFC2P16383 781 aaKnown RBP10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 CDK8P49336 464 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 TXNRD3Q86VQ6 643 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 MTMR8Q96EF0 704 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 DYNLL2Q96FJ2 89 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 CRACR2AQ9BSW2 395 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 PCDHGC5Q9Y5F6 944 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 CAPN6Q9Y6Q1 641 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 BAZ2BQ9UIF8 2168 aaKnown RBP10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 FRMD3A2A2Y4 597 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 OPA1O60313 960 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 GGCXP38435 758 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 TMEM266Q2M3C6 531 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 C10orf76Q5T2E6 689 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 HAUS3Q68CZ6 603 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 RASSF8Q8NHQ8 419 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 CERKQ8TCT0 537 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 TBCKQ8TEA7 893 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 DNAJC19Q96DA6 116 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 MBOAT7Q96N66 472 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 SETDB2Q96T68 719 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 TLR10Q9BXR5 811 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 TFCP2L1Q9NZI6 479 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 ARFGEF1Q9Y6D6 1849 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 EIF4A3P38919 411 aaKnown RBP10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 GABPAQ06546 454 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 SOGA3Q5TF21 947 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 ZNF804AQ7Z570 1209 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 FAM76AQ8TAV0 307 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 AIPL1Q9NZN9 384 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 STIM2Q9P246 746 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 LCMT1Q9UIC8 334 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 PCDHA2Q9Y5H9 948 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 DUSP10Q9Y6W6 482 aa10.23□□□□□ -0.77
PDGFRA-208ENST00000509490 MYH7BA7E2Y1 1941 aa10.22□□□□□ -0.77
PDGFRA-208ENST00000509490 GOLGA6BA6NDN3 693 aa10.22□□□□□ -0.77
PDGFRA-208ENST00000509490 EPHB6O15197 1021 aa10.22□□□□□ -0.77
PDGFRA-208ENST00000509490 SERPING1P05155 500 aa10.22□□□□□ -0.77
PDGFRA-208ENST00000509490 RHBDL3P58872 404 aa10.22□□□□□ -0.77
PDGFRA-208ENST00000509490 KCNMA1Q12791 1236 aa10.22□□□□□ -0.77
PDGFRA-208ENST00000509490 CALCRLQ16602 461 aa10.22□□□□□ -0.77
PDGFRA-208ENST00000509490 LETM2Q2VYF4 491 aa10.22□□□□□ -0.77
PDGFRA-208ENST00000509490 KLHDC7AQ5VTJ3 777 aa10.22□□□□□ -0.77
PDGFRA-208ENST00000509490 MOXD1Q6UVY6 613 aa10.22□□□□□ -0.77
PDGFRA-208ENST00000509490 TEX2Q8IWB9 1127 aa10.22□□□□□ -0.77
PDGFRA-208ENST00000509490 KCTD17Q8N5Z5 321 aa10.22□□□□□ -0.77
PDGFRA-208ENST00000509490 EYA3Q99504 573 aa10.22□□□□□ -0.77
PDGFRA-208ENST00000509490 TSG101Q99816 390 aa10.22□□□□□ -0.77
PDGFRA-208ENST00000509490 LUC7LQ9NQ29 371 aaKnown RBP10.22□□□□□ -0.77
PDGFRA-208ENST00000509490 SEC63Q9UGP8 760 aaKnown RBP10.22□□□□□ -0.77
PDGFRA-208ENST00000509490 TMEM59LQ9UK28 342 aa10.22□□□□□ -0.77
PDGFRA-208ENST00000509490 KDM3AQ9Y4C1 1321 aa10.22□□□□□ -0.77
PDGFRA-208ENST00000509490 ZNF185O15231 689 aa10.22□□□□□ -0.77
PDGFRA-208ENST00000509490 FKBP3Q00688 224 aaKnown RBP10.22□□□□□ -0.77
PDGFRA-208ENST00000509490 NAB2Q15742 525 aa10.22□□□□□ -0.77
PDGFRA-208ENST00000509490 POTEDQ86YR6 584 aa10.22□□□□□ -0.77
PDGFRA-208ENST00000509490 TRIM59Q8IWR1 403 aa10.22□□□□□ -0.77
PDGFRA-208ENST00000509490 SLF2Q8IX21 1173 aa10.22□□□□□ -0.77
PDGFRA-208ENST00000509490 EFCAB13Q8IY85 973 aa10.22□□□□□ -0.77
PDGFRA-208ENST00000509490 ACSBG1Q96GR2 724 aa10.22□□□□□ -0.77
PDGFRA-208ENST00000509490 NOX5Q96PH1 765 aa10.22□□□□□ -0.77
PDGFRA-208ENST00000509490 GLT8D2Q9H1C3 349 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms