RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 ZBTB5O15062 677 aa8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 STRNO43815 780 aa8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 PPFIA3O75145 1194 aa8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 REC8O95072 547 aa8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 ARIH2O95376 493 aa8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 FDX1P10109 184 aa8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 COL6A1P12109 1028 aa8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 CASTP20810 708 aaKnown RBP8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 COPB2P35606 906 aa8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 RFC5P40937 340 aa8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 ALDH5A1P51649 535 aaPredicted RBP8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 RPS6P62753 249 aaKnown RBP8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 BAATQ14032 418 aaPredicted RBP8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 KCTD2Q14681 263 aa8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 ARHGEF6Q15052 776 aa8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 TKFCQ3LXA3 575 aa8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 GJC2Q5T442 439 aaPredicted RBP8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 CASC1Q6TDU7 716 aa8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 NSMFQ6X4W1 530 aa8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 ARMCX2Q7L311 632 aa8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 FBXO16Q8IX29 292 aaPredicted RBP8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 SYTL5Q8TDW5 730 aaPredicted RBP8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 PIBF1Q8WXW3 757 aa8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 GPKOWQ92917 476 aaPredicted RBP eCLIP8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 BRF1Q92994 677 aa8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 SPZ1Q9BXG8 430 aa8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 VAT1LQ9HCJ6 419 aa8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 PDGFCQ9NRA1 345 aa8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 DDX20Q9UHI6 824 aaKnown RBP8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 OGDHLQ9ULD0 1010 aa8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 DIS3Q9Y2L1 958 aaKnown RBP8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 IVNS1ABPQ9Y6Y0 642 aa8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 SYNGAP1Q96PV0 1343 aa8.37□□□□□ -1.07
TOPBP1-207ENST00000509162 SYNRGQ9UMZ2 1314 aa8.37□□□□□ -1.07
TOPBP1-207ENST00000509162 GOLGA8BA8MQT2 603 aa8.37□□□□□ -1.07
TOPBP1-207ENST00000509162 EPB41L2O43491 1005 aaKnown RBP8.37□□□□□ -1.07
TOPBP1-207ENST00000509162 ADAMTS4O75173 837 aa8.37□□□□□ -1.07
TOPBP1-207ENST00000509162 SGPL1O95470 568 aa8.37□□□□□ -1.07
TOPBP1-207ENST00000509162 HSD17B4P51659 736 aa8.37□□□□□ -1.07
TOPBP1-207ENST00000509162 EVCP57679 992 aa8.37□□□□□ -1.07
TOPBP1-207ENST00000509162 UBXN2AP68543 259 aa8.37□□□□□ -1.07
TOPBP1-207ENST00000509162 NTRK3Q16288 839 aa8.37□□□□□ -1.07
TOPBP1-207ENST00000509162 RNF20Q5VTR2 975 aa8.37□□□□□ -1.07
TOPBP1-207ENST00000509162 WWC2Q6AWC2 1192 aa8.37□□□□□ -1.07
TOPBP1-207ENST00000509162 TAPT1Q6NXT6 567 aa8.37□□□□□ -1.07
TOPBP1-207ENST00000509162 DPP9Q86TI2 863 aa8.37□□□□□ -1.07
TOPBP1-207ENST00000509162 FBXL16Q8N461 479 aa8.37□□□□□ -1.07
TOPBP1-207ENST00000509162 TAAR1Q96RJ0 339 aa8.37□□□□□ -1.07
TOPBP1-207ENST00000509162 MAP3K14Q99558 947 aa8.37□□□□□ -1.07
TOPBP1-207ENST00000509162 NCOA5Q9HCD5 579 aaKnown RBP8.37□□□□□ -1.07
TOPBP1-207ENST00000509162 CWC22Q9HCG8 908 aaKnown RBP8.37□□□□□ -1.07
TOPBP1-207ENST00000509162 FBXO40Q9UH90 709 aa8.37□□□□□ -1.07
TOPBP1-207ENST00000509162 TELO2Q9Y4R8 837 aa8.37□□□□□ -1.07
TOPBP1-207ENST00000509162 ABCB11O95342 1321 aa8.36□□□□□ -1.07
TOPBP1-207ENST00000509162 GOLGA8AA7E2F4 631 aa8.36□□□□□ -1.07
TOPBP1-207ENST00000509162 SEPT4O43236 478 aa8.36□□□□□ -1.07
TOPBP1-207ENST00000509162 FARP2O94887 1054 aaPredicted RBP8.36□□□□□ -1.07
TOPBP1-207ENST00000509162 PDIA4P13667 645 aaKnown RBP8.36□□□□□ -1.07
TOPBP1-207ENST00000509162 CALML3P27482 149 aa8.36□□□□□ -1.07
TOPBP1-207ENST00000509162 HOXA13P31271 388 aaPredicted RBP8.36□□□□□ -1.07
TOPBP1-207ENST00000509162 ADD1P35611 737 aaKnown RBP8.36□□□□□ -1.07
TOPBP1-207ENST00000509162 ADCYAP1R1P41586 468 aa8.36□□□□□ -1.07
TOPBP1-207ENST00000509162 KRT32Q14532 448 aa8.36□□□□□ -1.07
TOPBP1-207ENST00000509162 SART3Q15020 963 aaKnown RBP8.36□□□□□ -1.07
TOPBP1-207ENST00000509162 PKN1Q16512 942 aa8.36□□□□□ -1.07
TOPBP1-207ENST00000509162 CCSAPQ6IQ19 270 aaPredicted RBP8.36□□□□□ -1.07
TOPBP1-207ENST00000509162 BLOC1S2Q6QNY1 142 aa8.36□□□□□ -1.07
TOPBP1-207ENST00000509162 RUFY3Q7L099 469 aa8.36□□□□□ -1.07
TOPBP1-207ENST00000509162 CATIPQ7Z7H3 387 aa8.36□□□□□ -1.07
TOPBP1-207ENST00000509162 FBXO11Q86XK2 927 aa8.36□□□□□ -1.07
TOPBP1-207ENST00000509162 CCAR1Q8IX12 1150 aaKnown RBP8.36□□□□□ -1.07
TOPBP1-207ENST00000509162 ANKRD35Q8N283 1001 aa8.36□□□□□ -1.07
TOPBP1-207ENST00000509162 TM6SF1Q9BZW5 370 aa8.36□□□□□ -1.07
TOPBP1-207ENST00000509162 HMX1Q9NP08 348 aaPredicted RBP8.36□□□□□ -1.07
TOPBP1-207ENST00000509162 BIN2Q9UBW5 565 aaPredicted RBP8.36□□□□□ -1.07
TOPBP1-207ENST00000509162 LIMD1Q9UGP4 676 aa8.36□□□□□ -1.07
TOPBP1-207ENST00000509162 SLC12A7Q9Y666 1083 aa8.36□□□□□ -1.07
TOPBP1-207ENST00000509162 CEP290O15078 2479 aa8.36□□□□□ -1.07
TOPBP1-207ENST00000509162 SZT2Q5T011 3432 aa8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 KIAA1217Q5T5P2 1943 aa8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 DOCK5Q9H7D0 1870 aa8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 ERICH2A1L162 156 aa8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 PTPDC1A2A3K4 754 aa8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 CCDC69A6NI79 296 aa8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 STXBP3O00186 592 aa8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 MEIS2O14770 477 aa8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 ZBTB43O43298 467 aa8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 EDIL3O43854 480 aa8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 DHX16O60231 1041 aaKnown RBP8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 CD2BP2O95400 341 aaKnown RBP8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 CTDNEP1O95476 244 aa8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 PGK1P00558 417 aa8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 PDIA3P30101 505 aaKnown RBP8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 SEMA3FQ13275 785 aa8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 NPY5RQ15761 445 aa8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 UBE2SQ16763 222 aa8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 RTN1Q16799 776 aa8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 TMEM259Q4ZIN3 620 aa8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 MFSD14CQ5VZR4 134 aa8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 NFXL1Q6ZNB6 911 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms