RNA–Protein interactions for RNA: ENST00000509112.1

CALCOCO2-213, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 459 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-213ENST00000509112 BHLHE41Q9C0J9 482 aaPredicted RBP5.4□□□□□ -1.54
CALCOCO2-213ENST00000509112 OSBPL5Q9H0X9 879 aaPredicted RBP5.4□□□□□ -1.54
CALCOCO2-213ENST00000509112 BICC1Q9H694 974 aaKnown RBP5.4□□□□□ -1.54
CALCOCO2-213ENST00000509112 C11orf49Q9H6J7 331 aa5.4□□□□□ -1.54
CALCOCO2-213ENST00000509112 GINM1Q9NU53 330 aa5.4□□□□□ -1.54
CALCOCO2-213ENST00000509112 USP40Q9NVE5 1235 aa5.4□□□□□ -1.54
CALCOCO2-213ENST00000509112 GNL3LQ9NVN8 582 aaKnown RBP5.4□□□□□ -1.54
CALCOCO2-213ENST00000509112 DENND2AQ9ULE3 1009 aa5.4□□□□□ -1.54
CALCOCO2-213ENST00000509112 LRRFIP2Q9Y608 721 aaKnown RBP5.4□□□□□ -1.54
CALCOCO2-213ENST00000509112 ZHX2Q9Y6X8 837 aa5.4□□□□□ -1.54
CALCOCO2-213ENST00000509112 PTPRCP08575 1304 aa5.4□□□□□ -1.55
CALCOCO2-213ENST00000509112 FOCADQ5VW36 1801 aa5.39□□□□□ -1.55
CALCOCO2-213ENST00000509112 EYA2O00167 538 aa5.39□□□□□ -1.55
CALCOCO2-213ENST00000509112 PIK3R2O00459 728 aa5.39□□□□□ -1.55
CALCOCO2-213ENST00000509112 HOXA7P31268 230 aaPredicted RBP5.39□□□□□ -1.55
CALCOCO2-213ENST00000509112 MAGEA10P43363 369 aaPredicted RBP5.39□□□□□ -1.55
CALCOCO2-213ENST00000509112 RFX5P48382 616 aaPredicted RBP5.39□□□□□ -1.55
CALCOCO2-213ENST00000509112 DAB2P98082 770 aa5.39□□□□□ -1.55
CALCOCO2-213ENST00000509112 TCP10Q12799 353 aa5.39□□□□□ -1.55
CALCOCO2-213ENST00000509112 RAB44Q7Z6P3 723 aaPredicted RBP5.39□□□□□ -1.55
CALCOCO2-213ENST00000509112 TMEM102Q8N9M5 508 aaPredicted RBP5.39□□□□□ -1.55
CALCOCO2-213ENST00000509112 DIS3LQ8TF46 1054 aaKnown RBP5.39□□□□□ -1.55
CALCOCO2-213ENST00000509112 GIPC2Q8TF65 315 aa5.39□□□□□ -1.55
CALCOCO2-213ENST00000509112 EDARADDQ8WWZ3 215 aa5.39□□□□□ -1.55
CALCOCO2-213ENST00000509112 SOCS4Q8WXH5 440 aa5.39□□□□□ -1.55
CALCOCO2-213ENST00000509112 SUV39H2Q9H5I1 410 aa5.39□□□□□ -1.55
CALCOCO2-213ENST00000509112 DZANK1Q9NVP4 752 aa5.39□□□□□ -1.55
CALCOCO2-213ENST00000509112 PPP4R2Q9NY27 417 aa5.39□□□□□ -1.55
CALCOCO2-213ENST00000509112 LTBP2Q14767 1821 aa5.39□□□□□ -1.55
CALCOCO2-213ENST00000509112 GPR75-ASB3A0A0A6YYF3 556 aa5.38□□□□□ -1.55
CALCOCO2-213ENST00000509112 SMNDC1O75940 238 aaKnown RBP eCLIP5.38□□□□□ -1.55
CALCOCO2-213ENST00000509112 CYP2E1P05181 493 aaPredicted RBP5.38□□□□□ -1.55
CALCOCO2-213ENST00000509112 CELA2BP08218 269 aaPredicted RBP5.38□□□□□ -1.55
CALCOCO2-213ENST00000509112 PRDX5P30044 214 aa5.38□□□□□ -1.55
CALCOCO2-213ENST00000509112 ZEB1P37275 1124 aaPredicted RBP5.38□□□□□ -1.55
CALCOCO2-213ENST00000509112 RGS3P49796 1198 aa5.38□□□□□ -1.55
CALCOCO2-213ENST00000509112 PEAR1Q5VY43 1037 aaPredicted RBP5.38□□□□□ -1.55
CALCOCO2-213ENST00000509112 SPTY2D1Q68D10 685 aaPredicted RBP5.38□□□□□ -1.55
CALCOCO2-213ENST00000509112 C20orf204Q6ZNR8 217 aa5.38□□□□□ -1.55
CALCOCO2-213ENST00000509112 GADL1Q6ZQY3 521 aa5.38□□□□□ -1.55
CALCOCO2-213ENST00000509112 ATG9AQ7Z3C6 839 aa5.38□□□□□ -1.55
CALCOCO2-213ENST00000509112 FAM35AQ86V20 835 aa5.38□□□□□ -1.55
CALCOCO2-213ENST00000509112 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.38□□□□□ -1.55
CALCOCO2-213ENST00000509112 ZFPM1Q8IX07 1006 aa5.38□□□□□ -1.55
CALCOCO2-213ENST00000509112 C7orf61Q8IZ16 206 aa5.38□□□□□ -1.55
CALCOCO2-213ENST00000509112 ANKRD13CQ8N6S4 541 aa5.38□□□□□ -1.55
CALCOCO2-213ENST00000509112 GALNT6Q8NCL4 622 aa5.38□□□□□ -1.55
CALCOCO2-213ENST00000509112 USP6NLQ92738 828 aa5.38□□□□□ -1.55
CALCOCO2-213ENST00000509112 LPIN3Q9BQK8 851 aa5.38□□□□□ -1.55
CALCOCO2-213ENST00000509112 WDR18Q9BV38 432 aa5.38□□□□□ -1.55
CALCOCO2-213ENST00000509112 PBX4Q9BYU1 374 aa5.38□□□□□ -1.55
CALCOCO2-213ENST00000509112 MUC3BQ9H195 1237 aa5.38□□□□□ -1.55
CALCOCO2-213ENST00000509112 AS3MTQ9HBK9 375 aa5.38□□□□□ -1.55
CALCOCO2-213ENST00000509112 HERC5Q9UII4 1024 aaKnown RBP5.38□□□□□ -1.55
CALCOCO2-213ENST00000509112 HDAC5Q9UQL6 1122 aa5.38□□□□□ -1.55
CALCOCO2-213ENST00000509112 AK5Q9Y6K8 562 aa5.38□□□□□ -1.55
CALCOCO2-213ENST00000509112 PFASO15067 1338 aa5.38□□□□□ -1.55
CALCOCO2-213ENST00000509112 RLFQ13129 1914 aa5.38□□□□□ -1.55
CALCOCO2-213ENST00000509112 UNC80Q8N2C7 3258 aa5.37□□□□□ -1.55
CALCOCO2-213ENST00000509112 SIPA1L1O43166 1804 aa5.37□□□□□ -1.55
CALCOCO2-213ENST00000509112 ZNF236Q9UL36 1845 aa5.37□□□□□ -1.55
CALCOCO2-213ENST00000509112 CDK5RAP2Q96SN8 1893 aa5.37□□□□□ -1.55
CALCOCO2-213ENST00000509112 TMEM265A0A087WTH1 108 aa5.37□□□□□ -1.55
CALCOCO2-213ENST00000509112 A0A1W2PP55 124 aa5.37□□□□□ -1.55
CALCOCO2-213ENST00000509112 DDTLA6NHG4 134 aaPredicted RBP5.37□□□□□ -1.55
CALCOCO2-213ENST00000509112 C19orf81C9J6K1 198 aa5.37□□□□□ -1.55
CALCOCO2-213ENST00000509112 MSCO60682 206 aa5.37□□□□□ -1.55
CALCOCO2-213ENST00000509112 MAPK4P31152 587 aa5.37□□□□□ -1.55
CALCOCO2-213ENST00000509112 CAP2P40123 477 aa5.37□□□□□ -1.55
CALCOCO2-213ENST00000509112 IL15P40933 162 aaPredicted RBP5.37□□□□□ -1.55
CALCOCO2-213ENST00000509112 RHBDL3P58872 404 aa5.37□□□□□ -1.55
CALCOCO2-213ENST00000509112 MRPL58Q14197 206 aaKnown RBP5.37□□□□□ -1.55
CALCOCO2-213ENST00000509112 TREML2Q5T2D2 321 aa5.37□□□□□ -1.55
CALCOCO2-213ENST00000509112 SLC4A10Q6U841 1118 aa5.37□□□□□ -1.55
CALCOCO2-213ENST00000509112 METTL16Q86W50 562 aaKnown RBP5.37□□□□□ -1.55
CALCOCO2-213ENST00000509112 CCNJLQ8IV13 435 aa5.37□□□□□ -1.55
CALCOCO2-213ENST00000509112 TRIB2Q92519 343 aa5.37□□□□□ -1.55
CALCOCO2-213ENST00000509112 BTBD6Q96KE9 485 aa5.37□□□□□ -1.55
CALCOCO2-213ENST00000509112 ADAM19Q9H013 955 aa5.37□□□□□ -1.55
CALCOCO2-213ENST00000509112 USP44Q9H0E7 712 aa5.37□□□□□ -1.55
CALCOCO2-213ENST00000509112 SRA1Q9HD15 236 aaKnown RBP5.37□□□□□ -1.55
CALCOCO2-213ENST00000509112 NPHS2Q9NP85 383 aa5.37□□□□□ -1.55
CALCOCO2-213ENST00000509112 FAM8A1Q9UBU6 413 aa5.37□□□□□ -1.55
CALCOCO2-213ENST00000509112 PPM1HQ9ULR3 514 aa5.37□□□□□ -1.55
CALCOCO2-213ENST00000509112 ZMYND8Q9ULU4 1186 aaPredicted RBP5.37□□□□□ -1.55
CALCOCO2-213ENST00000509112 MROH7-TTC4A0A0A0MT08 1334 aa5.37□□□□□ -1.55
CALCOCO2-213ENST00000509112 CUL9Q8IWT3 2517 aa5.37□□□□□ -1.55
CALCOCO2-213ENST00000509112 A0A0C4DFX4 3053 aa5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 TRIM75PA6NK02 468 aa5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 RGS9O75916 674 aaPredicted RBP5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 LDHCP07864 332 aa5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 EIF2AK2P19525 551 aaKnown RBP5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 ITPKAP23677 461 aa5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 RGS2P41220 211 aa5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 BACE1P56817 501 aa5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 INSM1Q01101 510 aaPredicted RBP5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 SPP2Q13103 211 aa5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 ATP2B3Q16720 1220 aa5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 RPS26P11Q5JNZ5 115 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms