RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 CABYRO75952 493 aa19.48■□□□□ 0.71
CLDND1-219ENST00000508659 CCT2P78371 535 aaKnown RBP19.48■□□□□ 0.71
CLDND1-219ENST00000508659 AKAP17AQ02040 695 aaKnown RBP19.48■□□□□ 0.71
CLDND1-219ENST00000508659 CXCL17Q6UXB2 119 aa19.48■□□□□ 0.71
CLDND1-219ENST00000508659 VSIG10LQ86VR7 867 aa19.48■□□□□ 0.71
CLDND1-219ENST00000508659 COPS5Q92905 334 aa19.48■□□□□ 0.71
CLDND1-219ENST00000508659 BARHL2Q9NY43 387 aa19.48■□□□□ 0.71
CLDND1-219ENST00000508659 MROH7Q68CQ1 1323 aa19.48■□□□□ 0.71
CLDND1-219ENST00000508659 GH1P01241 217 aa19.47■□□□□ 0.71
CLDND1-219ENST00000508659 SCG2P13521 617 aa19.47■□□□□ 0.71
CLDND1-219ENST00000508659 ADCY7P51828 1080 aa19.47■□□□□ 0.71
CLDND1-219ENST00000508659 UBE2SQ16763 222 aa19.47■□□□□ 0.71
CLDND1-219ENST00000508659 PFKFB3Q16875 520 aaPredicted RBP19.47■□□□□ 0.71
CLDND1-219ENST00000508659 LY6KQ17RY6 165 aa19.47■□□□□ 0.71
CLDND1-219ENST00000508659 GNPTABQ3T906 1256 aa19.47■□□□□ 0.71
CLDND1-219ENST00000508659 CCDC62Q6P9F0 684 aa19.47■□□□□ 0.71
CLDND1-219ENST00000508659 NCOA5Q9HCD5 579 aaKnown RBP19.47■□□□□ 0.71
CLDND1-219ENST00000508659 POLR3EQ9NVU0 708 aa19.47■□□□□ 0.71
CLDND1-219ENST00000508659 STXBP3O00186 592 aa19.46■□□□□ 0.71
CLDND1-219ENST00000508659 CPLX1O14810 134 aa19.46■□□□□ 0.71
CLDND1-219ENST00000508659 STAM2O75886 525 aa19.46■□□□□ 0.71
CLDND1-219ENST00000508659 TLE2Q04725 743 aa19.46■□□□□ 0.71
CLDND1-219ENST00000508659 TYW1BQ6NUM6 668 aa19.46■□□□□ 0.71
CLDND1-219ENST00000508659 KCNV1Q6PIU1 500 aa19.46■□□□□ 0.71
CLDND1-219ENST00000508659 TEX2Q8IWB9 1127 aa19.46■□□□□ 0.71
CLDND1-219ENST00000508659 PHKBQ93100 1093 aa19.46■□□□□ 0.71
CLDND1-219ENST00000508659 RNF26Q9BY78 433 aaPredicted RBP19.46■□□□□ 0.71
CLDND1-219ENST00000508659 EHMT1Q9H9B1 1298 aa19.46■□□□□ 0.71
CLDND1-219ENST00000508659 PDLIM7Q9NR12 457 aa19.46■□□□□ 0.71
CLDND1-219ENST00000508659 DDX41Q9UJV9 622 aaKnown RBP19.46■□□□□ 0.71
CLDND1-219ENST00000508659 COLQQ9Y215 455 aaPredicted RBP19.46■□□□□ 0.71
CLDND1-219ENST00000508659 DCDC2CA8MYV0 355 aa19.45■□□□□ 0.7
CLDND1-219ENST00000508659 RGS20O76081 388 aa19.45■□□□□ 0.7
CLDND1-219ENST00000508659 SEC24BO95487 1268 aa19.45■□□□□ 0.7
CLDND1-219ENST00000508659 MYL3P08590 195 aa19.45■□□□□ 0.7
CLDND1-219ENST00000508659 CLTBP09497 229 aa19.45■□□□□ 0.7
CLDND1-219ENST00000508659 ANKRD1Q15327 319 aa19.45■□□□□ 0.7
CLDND1-219ENST00000508659 C8orf34Q49A92 452 aa19.45■□□□□ 0.7
CLDND1-219ENST00000508659 PCNX4Q63HM2 1172 aa19.45■□□□□ 0.7
CLDND1-219ENST00000508659 XRRA1Q6P2D8 792 aa19.45■□□□□ 0.7
CLDND1-219ENST00000508659 ANKRD33Q7Z3H0 272 aa19.45■□□□□ 0.7
CLDND1-219ENST00000508659 CCDC12Q8WUD4 166 aaPredicted RBP19.45■□□□□ 0.7
CLDND1-219ENST00000508659 ZNF274Q96GC6 653 aaPredicted RBP19.45■□□□□ 0.7
CLDND1-219ENST00000508659 ZFP91Q96JP5 570 aaPredicted RBP19.45■□□□□ 0.7
CLDND1-219ENST00000508659 LARP6Q9BRS8 491 aaKnown RBP19.45■□□□□ 0.7
CLDND1-219ENST00000508659 SLC26A6Q9BXS9 759 aa19.45■□□□□ 0.7
CLDND1-219ENST00000508659 GLT8D2Q9H1C3 349 aa19.45■□□□□ 0.7
CLDND1-219ENST00000508659 RIC8AQ9NPQ8 531 aa19.45■□□□□ 0.7
CLDND1-219ENST00000508659 A6NJR5 290 aa19.44■□□□□ 0.7
CLDND1-219ENST00000508659 PRPF3O43395 683 aaKnown RBP19.44■□□□□ 0.7
CLDND1-219ENST00000508659 PPFIA3O75145 1194 aa19.44■□□□□ 0.7
CLDND1-219ENST00000508659 MMP3P08254 477 aa19.44■□□□□ 0.7
CLDND1-219ENST00000508659 IFNAR1P17181 557 aa19.44■□□□□ 0.7
CLDND1-219ENST00000508659 MAGEA10P43363 369 aaPredicted RBP19.44■□□□□ 0.7
CLDND1-219ENST00000508659 PURAQ00577 322 aaKnown RBP19.44■□□□□ 0.7
CLDND1-219ENST00000508659 ARHGAP1Q07960 439 aa19.44■□□□□ 0.7
CLDND1-219ENST00000508659 STK3Q13188 491 aa19.44■□□□□ 0.7
CLDND1-219ENST00000508659 CPLX2Q6PUV4 134 aaKnown RBP19.44■□□□□ 0.7
CLDND1-219ENST00000508659 TRIM22Q8IYM9 498 aa19.44■□□□□ 0.7
CLDND1-219ENST00000508659 AFG1LQ8WV93 481 aa19.44■□□□□ 0.7
CLDND1-219ENST00000508659 EMID1Q96A84 441 aaPredicted RBP19.44■□□□□ 0.7
CLDND1-219ENST00000508659 IL17RAQ96F46 866 aa19.44■□□□□ 0.7
CLDND1-219ENST00000508659 TOX2Q96NM4 488 aa19.44■□□□□ 0.7
CLDND1-219ENST00000508659 INPP4AQ96PE3 977 aaPredicted RBP19.44■□□□□ 0.7
CLDND1-219ENST00000508659 LBHD1Q9BQE6 289 aaPredicted RBP19.44■□□□□ 0.7
CLDND1-219ENST00000508659 SMCO2A6NFE2 343 aa19.43■□□□□ 0.7
CLDND1-219ENST00000508659 ARVCFO00192 962 aa19.43■□□□□ 0.7
CLDND1-219ENST00000508659 UBA1P22314 1058 aaKnown RBP19.43■□□□□ 0.7
CLDND1-219ENST00000508659 PSMC6P62333 389 aa19.43■□□□□ 0.7
CLDND1-219ENST00000508659 MRPS9P82933 396 aaKnown RBP19.43■□□□□ 0.7
CLDND1-219ENST00000508659 ITGA7Q13683 1181 aa19.43■□□□□ 0.7
CLDND1-219ENST00000508659 NTRK3Q16288 839 aa19.43■□□□□ 0.7
CLDND1-219ENST00000508659 CCDC148Q8NFR7 591 aa19.43■□□□□ 0.7
CLDND1-219ENST00000508659 MTG1Q9BT17 334 aaPredicted RBP19.43■□□□□ 0.7
CLDND1-219ENST00000508659 RTEL1Q9NZ71 1219 aa19.43■□□□□ 0.7
CLDND1-219ENST00000508659 PCDH10Q9P2E7 1040 aa19.43■□□□□ 0.7
CLDND1-219ENST00000508659 PCDHA6Q9UN73 950 aa19.43■□□□□ 0.7
CLDND1-219ENST00000508659 PCDHA8Q9Y5H6 950 aa19.43■□□□□ 0.7
CLDND1-219ENST00000508659 TLR3O15455 904 aaKnown RBP19.42■□□□□ 0.7
CLDND1-219ENST00000508659 FIBPO43427 364 aa19.42■□□□□ 0.7
CLDND1-219ENST00000508659 KPNA6O60684 536 aa19.42■□□□□ 0.7
CLDND1-219ENST00000508659 GGPS1O95749 300 aa19.42■□□□□ 0.7
CLDND1-219ENST00000508659 TGFB3P10600 412 aa19.42■□□□□ 0.7
CLDND1-219ENST00000508659 AK2P54819 239 aa19.42■□□□□ 0.7
CLDND1-219ENST00000508659 AP3B2Q13367 1082 aa19.42■□□□□ 0.7
CLDND1-219ENST00000508659 LAMC2Q13753 1193 aa19.42■□□□□ 0.7
CLDND1-219ENST00000508659 NLRX1Q86UT6 975 aa19.42■□□□□ 0.7
CLDND1-219ENST00000508659 DHX37Q8IY37 1157 aaKnown RBP19.42■□□□□ 0.7
CLDND1-219ENST00000508659 PPTC7Q8NI37 304 aa19.42■□□□□ 0.7
CLDND1-219ENST00000508659 SEZ6LQ9BYH1 1024 aa19.42■□□□□ 0.7
CLDND1-219ENST00000508659 CEP290O15078 2479 aa19.42■□□□□ 0.7
CLDND1-219ENST00000508659 DNAH12Q6ZR08 3092 aa19.41■□□□□ 0.7
CLDND1-219ENST00000508659 ESYT2A0FGR8 921 aa19.41■□□□□ 0.7
CLDND1-219ENST00000508659 SORBS3O60504 671 aa19.41■□□□□ 0.7
CLDND1-219ENST00000508659 CDKL5O76039 1030 aa19.41■□□□□ 0.7
CLDND1-219ENST00000508659 FOSP01100 380 aaPredicted RBP19.41■□□□□ 0.7
CLDND1-219ENST00000508659 MDM2Q00987 491 aaPredicted RBP19.41■□□□□ 0.7
CLDND1-219ENST00000508659 SSRP1Q08945 709 aaKnown RBP19.41■□□□□ 0.7
CLDND1-219ENST00000508659 PKN1Q16512 942 aa19.41■□□□□ 0.7
CLDND1-219ENST00000508659 HABP4Q5JVS0 413 aaKnown RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms