RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 UQCRFS1P1P0C7P4 283 aa6.68□□□□□ -1.34
HMGB1P44-201ENST00000508597 BMP3P12645 472 aa6.68□□□□□ -1.34
HMGB1P44-201ENST00000508597 HIBADHP31937 336 aaKnown RBP6.68□□□□□ -1.34
HMGB1P44-201ENST00000508597 SOX4Q06945 474 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P44-201ENST00000508597 CCDC158Q5M9N0 1113 aa6.68□□□□□ -1.34
HMGB1P44-201ENST00000508597 CDPF1Q6NVV7 123 aa6.68□□□□□ -1.34
HMGB1P44-201ENST00000508597 CENPQQ7L2Z9 268 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P44-201ENST00000508597 VPS37DQ86XT2 251 aa6.68□□□□□ -1.34
HMGB1P44-201ENST00000508597 SULF2Q8IWU5 870 aa6.68□□□□□ -1.34
HMGB1P44-201ENST00000508597 NIM1KQ8IY84 436 aa6.68□□□□□ -1.34
HMGB1P44-201ENST00000508597 UTP4Q969X6 686 aaKnown RBP6.68□□□□□ -1.34
HMGB1P44-201ENST00000508597 CCDC136Q96JN2 1154 aa6.68□□□□□ -1.34
HMGB1P44-201ENST00000508597 CORO1BQ9BR76 489 aa6.68□□□□□ -1.34
HMGB1P44-201ENST00000508597 DUOX1Q9NRD9 1551 aa6.68□□□□□ -1.34
HMGB1P44-201ENST00000508597 IRS2Q9Y4H2 1338 aa6.68□□□□□ -1.34
HMGB1P44-201ENST00000508597 ARAP2Q8WZ64 1704 aa6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 HMX2A2RU54 273 aa6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 FZD9O00144 591 aa6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 AOC2O75106 756 aa6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 IGHDP01880 384 aa6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 GSTP1P09211 210 aaKnown RBP6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 IFIT2P09913 472 aaKnown RBP6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 IL1R1P14778 569 aa6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 ARNTP27540 789 aa6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 ST13P50502 369 aaKnown RBP6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 EIF6P56537 245 aaKnown RBP6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 TIMM10P62072 90 aa6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 FKBP1AP62942 108 aaKnown RBP6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 FANCCQ00597 558 aa6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 PTPN11Q06124 597 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 ZNF252P-AS1Q0IIN9 211 aa6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 TNIP1Q15025 636 aa6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 GORABQ5T7V8 394 aa6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 ANKRD45Q5TZF3 282 aa6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 ANKRD34AQ69YU3 496 aa6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 FDX2Q6P4F2 183 aa6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 TMED8Q6PL24 325 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 OLFM4Q6UX06 510 aa6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 TRIM42Q8IWZ5 723 aa6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 TBC1D22AQ8WUA7 517 aa6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 KCNB2Q92953 911 aa6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 GPATCH3Q96I76 525 aa6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 FAM84BQ96KN1 310 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 MYRFLQ96LU7 910 aa6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 NEUROD6Q96NK8 337 aa6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 CEP41Q9BYV8 373 aa6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 CD209Q9NNX6 404 aa6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 ZNF277Q9NRM2 450 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 ZNRF3Q9ULT6 936 aa6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 PDS5AQ29RF7 1337 aaKnown RBP6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 ZNF609O15014 1411 aa6.67□□□□□ -1.34
HMGB1P44-201ENST00000508597 PSME4Q14997 1843 aa6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 ERC2O15083 957 aa6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 ADH5P11766 374 aa6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 NME2P22392 152 aa6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 NUCB1Q02818 461 aa6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 AP3B2Q13367 1082 aa6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 AOC3Q16853 763 aa6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 STRIP1Q5VSL9 837 aa6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 AACSQ86V21 672 aa6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 CHD1LQ86WJ1 897 aa6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 TICAM2Q86XR7 235 aa6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 FAM20CQ8IXL6 584 aa6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 ZGPATQ8N5A5 531 aaKnown RBP6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 TMEM87AQ8NBN3 555 aa6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 TDRD7Q8NHU6 1098 aaKnown RBP6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 FBLIM1Q8WUP2 373 aa6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 EAF2Q96CJ1 260 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 C7orf69Q9H7B7 122 aa6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 CYP4F12Q9HCS2 524 aa6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 FAM105AQ9NUU6 356 aa6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 RNF181Q9P0P0 153 aa6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 DENND2AQ9ULE3 1009 aa6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 PPM1HQ9ULR3 514 aa6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 SUGT1Q9Y2Z0 365 aa6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 PCDHGC5Q9Y5F6 944 aa6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 ACTL7BQ9Y614 415 aa6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 TTC41PQ6P2S7 1318 aa6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 FAM205AQ6ZU69 1335 aa6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 MYO3BQ8WXR4 1341 aa6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 MYH13Q9UKX3 1938 aa6.66□□□□□ -1.34
HMGB1P44-201ENST00000508597 SART1O43290 800 aaKnown RBP6.65□□□□□ -1.34
HMGB1P44-201ENST00000508597 ECE2O60344 883 aa6.65□□□□□ -1.34
HMGB1P44-201ENST00000508597 FRAT2O75474 233 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P44-201ENST00000508597 RPS12P25398 132 aaKnown RBP6.65□□□□□ -1.34
HMGB1P44-201ENST00000508597 HDLBPQ00341 1268 aaKnown RBP6.65□□□□□ -1.34
HMGB1P44-201ENST00000508597 PPP2R3AQ06190 1150 aa6.65□□□□□ -1.34
HMGB1P44-201ENST00000508597 C9orf131Q5VYM1 1079 aa6.65□□□□□ -1.34
HMGB1P44-201ENST00000508597 MAP1SQ66K74 1059 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P44-201ENST00000508597 METTL16Q86W50 562 aaKnown RBP6.65□□□□□ -1.34
HMGB1P44-201ENST00000508597 WDR66Q8TBY9 1149 aa6.65□□□□□ -1.34
HMGB1P44-201ENST00000508597 GPBAR1Q8TDU6 330 aa6.65□□□□□ -1.34
HMGB1P44-201ENST00000508597 DBNDD2Q9BQY9 259 aa6.65□□□□□ -1.34
HMGB1P44-201ENST00000508597 ZFYVE1Q9HBF4 777 aa6.65□□□□□ -1.34
HMGB1P44-201ENST00000508597 CBX8Q9HC52 389 aa6.65□□□□□ -1.34
HMGB1P44-201ENST00000508597 IL1RAPL2Q9NP60 686 aa6.65□□□□□ -1.34
HMGB1P44-201ENST00000508597 RAD18Q9NS91 495 aa6.65□□□□□ -1.34
HMGB1P44-201ENST00000508597 CACNA2D2Q9NY47 1150 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms