RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 MKNK2Q9HBH9 465 aa14.86□□□□□ -0.03
SNCAIP-209ENST00000508017 BLOC1S4Q9NUP1 217 aa14.86□□□□□ -0.03
SNCAIP-209ENST00000508017 PALM3A6NDB9 673 aaPredicted RBP14.86□□□□□ -0.03
SNCAIP-209ENST00000508017 TNFRSF8P28908 595 aa14.86□□□□□ -0.03
SNCAIP-209ENST00000508017 TXKP42681 527 aa14.86□□□□□ -0.03
SNCAIP-209ENST00000508017 AMPD3Q01432 767 aa14.86□□□□□ -0.03
SNCAIP-209ENST00000508017 APBA1Q02410 837 aa14.86□□□□□ -0.03
SNCAIP-209ENST00000508017 NNTQ13423 1086 aa14.86□□□□□ -0.03
SNCAIP-209ENST00000508017 NONOQ15233 471 aaKnown RBP eCLIP14.86□□□□□ -0.03
SNCAIP-209ENST00000508017 IFT81Q8WYA0 676 aa14.86□□□□□ -0.03
SNCAIP-209ENST00000508017 ANKS1AQ92625 1134 aa14.86□□□□□ -0.03
SNCAIP-209ENST00000508017 PNMA5Q96PV4 448 aa14.86□□□□□ -0.03
SNCAIP-209ENST00000508017 TMEM47Q9BQJ4 181 aa14.86□□□□□ -0.03
SNCAIP-209ENST00000508017 ZMYND12Q9H0C1 365 aa14.86□□□□□ -0.03
SNCAIP-209ENST00000508017 EPB41L5Q9HCM4 733 aa14.86□□□□□ -0.03
SNCAIP-209ENST00000508017 NLRC4Q9NPP4 1024 aa14.86□□□□□ -0.03
SNCAIP-209ENST00000508017 LOC102724428A0A0B4J2F2 783 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 SMCO2A6NFE2 343 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 ZNF233A6NK53 670 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 KLRF2D3W0D1 207 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 TSPY3P0CV98 308 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 TSPY8P0CW00 308 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 HIBADHP31937 336 aaKnown RBP14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 PPP1R2P41236 205 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 GUCY2FP51841 1108 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 SIK1P57059 783 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 KCNMA1Q12791 1236 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 SF3B3Q15393 1217 aaKnown RBP14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 TRADDQ15628 312 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 COBLL1Q53SF7 1204 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 TDRD12Q587J7 1177 aaKnown RBP14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 LRRC55Q6ZSA7 311 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 NEK8Q86SG6 692 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 TXNRD3Q86VQ6 643 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 IQCDQ96DY2 449 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 CALML4Q96GE6 196 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 NOX5Q96PH1 765 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 TMEM260Q9NX78 707 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 MAST2Q6P0Q8 1798 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 NDUFAB1O14561 156 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 ZEB2O60315 1214 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 HEXIM1O94992 359 aaKnown RBP14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 FTCDO95954 541 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 GUCY2DQ02846 1103 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 BICDL1Q6ZP65 573 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 SV2BQ7L1I2 683 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 CACNA2D4Q7Z3S7 1137 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 KRT25Q7Z3Z0 450 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 SUGP1Q8IWZ8 645 aaKnown RBP14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 TBCKQ8TEA7 893 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 SH3RF3Q8TEJ3 882 aaPredicted RBP14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 PIK3R5Q8WYR1 880 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 RNPC3Q96LT9 517 aaKnown RBP14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 TANGO6Q9C0B7 1094 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 GDF3Q9NR23 364 aa14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 PACSIN2Q9UNF0 486 aaPredicted RBP14.85□□□□□ -0.03
SNCAIP-209ENST00000508017 INPP5BP32019 993 aa14.84□□□□□ -0.03
SNCAIP-209ENST00000508017 RNASE9P60153 205 aaKnown RBP14.84□□□□□ -0.03
SNCAIP-209ENST00000508017 KCNV1Q6PIU1 500 aa14.84□□□□□ -0.03
SNCAIP-209ENST00000508017 CCDC84Q86UT8 332 aaPredicted RBP14.84□□□□□ -0.03
SNCAIP-209ENST00000508017 DZIP1Q86YF9 867 aaKnown RBP14.84□□□□□ -0.03
SNCAIP-209ENST00000508017 IQCKQ8N0W5 287 aa14.84□□□□□ -0.03
SNCAIP-209ENST00000508017 VAT1LQ9HCJ6 419 aa14.84□□□□□ -0.03
SNCAIP-209ENST00000508017 BIN2Q9UBW5 565 aaPredicted RBP14.84□□□□□ -0.03
SNCAIP-209ENST00000508017 TLR2O60603 784 aa14.84□□□□□ -0.03
SNCAIP-209ENST00000508017 PALMO75781 387 aa14.84□□□□□ -0.03
SNCAIP-209ENST00000508017 GUCY1A3Q02108 690 aa14.84□□□□□ -0.03
SNCAIP-209ENST00000508017 CFAP221Q4G0U5 840 aa14.84□□□□□ -0.03
SNCAIP-209ENST00000508017 CFAP58Q5T655 872 aa14.84□□□□□ -0.03
SNCAIP-209ENST00000508017 UNC13DQ70J99 1090 aa14.84□□□□□ -0.03
SNCAIP-209ENST00000508017 SMIM5Q71RC9 77 aa14.84□□□□□ -0.03
SNCAIP-209ENST00000508017 IFT20Q8IY31 132 aa14.84□□□□□ -0.03
SNCAIP-209ENST00000508017 CASKIN2Q8WXE0 1202 aa14.84□□□□□ -0.03
SNCAIP-209ENST00000508017 NUDT12Q9BQG2 462 aa14.84□□□□□ -0.03
SNCAIP-209ENST00000508017 HNRNPH1P31943 449 aaKnown RBP14.83□□□□□ -0.04
SNCAIP-209ENST00000508017 KCNK18Q7Z418 384 aa14.83□□□□□ -0.04
SNCAIP-209ENST00000508017 SLC51AQ86UW1 340 aa14.83□□□□□ -0.04
SNCAIP-209ENST00000508017 GUF1Q8N442 669 aaKnown RBP14.83□□□□□ -0.04
SNCAIP-209ENST00000508017 KRT12Q99456 494 aa14.83□□□□□ -0.04
SNCAIP-209ENST00000508017 SAP30BPQ9UHR5 308 aaKnown RBP14.83□□□□□ -0.04
SNCAIP-209ENST00000508017 POTEMA6NI47 508 aa14.83□□□□□ -0.04
SNCAIP-209ENST00000508017 IRX3P78415 501 aaPredicted RBP14.83□□□□□ -0.04
SNCAIP-209ENST00000508017 USP17L2Q6R6M4 530 aa14.83□□□□□ -0.04
SNCAIP-209ENST00000508017 CCDC24Q8N4L8 307 aa14.83□□□□□ -0.04
SNCAIP-209ENST00000508017 LARP4BQ92615 738 aaKnown RBP14.83□□□□□ -0.04
SNCAIP-209ENST00000508017 KANSL2Q9H9L4 492 aa14.83□□□□□ -0.04
SNCAIP-209ENST00000508017 NOL4O94818 638 aa14.82□□□□□ -0.04
SNCAIP-209ENST00000508017 KLRC1P26715 233 aa14.82□□□□□ -0.04
SNCAIP-209ENST00000508017 LSP1P33241 339 aa14.82□□□□□ -0.04
SNCAIP-209ENST00000508017 PPARDQ03181 441 aa14.82□□□□□ -0.04
SNCAIP-209ENST00000508017 DIXDC1Q155Q3 683 aa14.82□□□□□ -0.04
SNCAIP-209ENST00000508017 KCTD19Q17RG1 926 aaPredicted RBP14.82□□□□□ -0.04
SNCAIP-209ENST00000508017 GLE1Q53GS7 698 aaKnown RBP14.82□□□□□ -0.04
SNCAIP-209ENST00000508017 ZNF444Q8N0Y2 327 aaPredicted RBP14.82□□□□□ -0.04
SNCAIP-209ENST00000508017 C6orf50Q9HD87 102 aa14.82□□□□□ -0.04
SNCAIP-209ENST00000508017 SSU72P8A0A1W2PR75 194 aa14.82□□□□□ -0.04
SNCAIP-209ENST00000508017 SLC37A4O43826 429 aa14.82□□□□□ -0.04
SNCAIP-209ENST00000508017 RASA1P20936 1047 aa14.82□□□□□ -0.04
SNCAIP-209ENST00000508017 PAK2Q13177 524 aa14.82□□□□□ -0.04
SNCAIP-209ENST00000508017 ENOX2Q16206 610 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms