RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 HTATIP2Q9BUP3 242 aa20.96■□□□□ 0.95
PDLIM7-216ENST00000506537 SENP6Q9GZR1 1112 aaPredicted RBP20.96■□□□□ 0.95
PDLIM7-216ENST00000506537 SMCO2A6NFE2 343 aa20.95■□□□□ 0.94
PDLIM7-216ENST00000506537 DYNC1LI2O43237 492 aaPredicted RBP20.95■□□□□ 0.94
PDLIM7-216ENST00000506537 CTDNEP1O95476 244 aa20.95■□□□□ 0.94
PDLIM7-216ENST00000506537 BEX3Q00994 111 aa20.95■□□□□ 0.94
PDLIM7-216ENST00000506537 AKAP17AQ02040 695 aaKnown RBP20.95■□□□□ 0.94
PDLIM7-216ENST00000506537 ST3GAL1Q11201 340 aa20.95■□□□□ 0.94
PDLIM7-216ENST00000506537 KCNA10Q16322 511 aa20.95■□□□□ 0.94
PDLIM7-216ENST00000506537 LRRC26Q2I0M4 334 aa20.95■□□□□ 0.94
PDLIM7-216ENST00000506537 NECAB1Q8N987 351 aa20.95■□□□□ 0.94
PDLIM7-216ENST00000506537 FERMT2Q96AC1 680 aa20.95■□□□□ 0.94
PDLIM7-216ENST00000506537 A0A1W2PQ45 241 aaPredicted RBP20.94■□□□□ 0.94
PDLIM7-216ENST00000506537 A0A1W2PQY0 241 aa20.94■□□□□ 0.94
PDLIM7-216ENST00000506537 ESYT2A0FGR8 921 aa20.94■□□□□ 0.94
PDLIM7-216ENST00000506537 TXNP10599 105 aaKnown RBP20.94■□□□□ 0.94
PDLIM7-216ENST00000506537 CLK2P49760 499 aaKnown RBP20.94■□□□□ 0.94
PDLIM7-216ENST00000506537 SSRP1Q08945 709 aaKnown RBP20.94■□□□□ 0.94
PDLIM7-216ENST00000506537 TTLL4Q14679 1199 aa20.94■□□□□ 0.94
PDLIM7-216ENST00000506537 TRIM22Q8IYM9 498 aa20.94■□□□□ 0.94
PDLIM7-216ENST00000506537 GTF3C6Q969F1 213 aa20.94■□□□□ 0.94
PDLIM7-216ENST00000506537 TBC1D32Q96NH3 1257 aa20.94■□□□□ 0.94
PDLIM7-216ENST00000506537 TSEN34Q9BSV6 310 aaKnown RBP20.94■□□□□ 0.94
PDLIM7-216ENST00000506537 BACH2Q9BYV9 841 aa20.94■□□□□ 0.94
PDLIM7-216ENST00000506537 SPC25Q9HBM1 224 aa20.94■□□□□ 0.94
PDLIM7-216ENST00000506537 TMEM260Q9NX78 707 aa20.94■□□□□ 0.94
PDLIM7-216ENST00000506537 VPS54Q9P1Q0 977 aa20.94■□□□□ 0.94
PDLIM7-216ENST00000506537 PCDHA6Q9UN73 950 aa20.94■□□□□ 0.94
PDLIM7-216ENST00000506537 Q9Y3F1 56 aa20.94■□□□□ 0.94
PDLIM7-216ENST00000506537 PCDHA8Q9Y5H6 950 aa20.94■□□□□ 0.94
PDLIM7-216ENST00000506537 ACLYP53396 1101 aa20.93■□□□□ 0.94
PDLIM7-216ENST00000506537 ATN1P54259 1190 aaPredicted RBP20.93■□□□□ 0.94
PDLIM7-216ENST00000506537 FSCN1Q16658 493 aaKnown RBP20.93■□□□□ 0.94
PDLIM7-216ENST00000506537 LY6KQ17RY6 165 aa20.93■□□□□ 0.94
PDLIM7-216ENST00000506537 GNASQ5JWF2 1037 aa20.93■□□□□ 0.94
PDLIM7-216ENST00000506537 PCNX4Q63HM2 1172 aa20.93■□□□□ 0.94
PDLIM7-216ENST00000506537 CPLX2Q6PUV4 134 aaKnown RBP20.93■□□□□ 0.94
PDLIM7-216ENST00000506537 TEX2Q8IWB9 1127 aa20.93■□□□□ 0.94
PDLIM7-216ENST00000506537 PGBD1Q96JS3 809 aa20.93■□□□□ 0.94
PDLIM7-216ENST00000506537 AIFM3Q96NN9 605 aa20.93■□□□□ 0.94
PDLIM7-216ENST00000506537 ZMYND12Q9H0C1 365 aa20.93■□□□□ 0.94
PDLIM7-216ENST00000506537 AP5M1Q9H0R1 490 aa20.93■□□□□ 0.94
PDLIM7-216ENST00000506537 UPF2Q9HAU5 1272 aaKnown RBP20.93■□□□□ 0.94
PDLIM7-216ENST00000506537 SPDYE3A6NKU9 549 aa20.92■□□□□ 0.94
PDLIM7-216ENST00000506537 NKRFO15226 690 aaKnown RBP eCLIP20.92■□□□□ 0.94
PDLIM7-216ENST00000506537 DEXIO95424 95 aa20.92■□□□□ 0.94
PDLIM7-216ENST00000506537 ASGR1P07306 291 aa20.92■□□□□ 0.94
PDLIM7-216ENST00000506537 OR6J1Q8NGC5 347 aa20.92■□□□□ 0.94
PDLIM7-216ENST00000506537 DPF3Q92784 378 aa20.92■□□□□ 0.94
PDLIM7-216ENST00000506537 INPP4AQ96PE3 977 aaPredicted RBP20.92■□□□□ 0.94
PDLIM7-216ENST00000506537 DDX41Q9UJV9 622 aaKnown RBP20.92■□□□□ 0.94
PDLIM7-216ENST00000506537 MRVI1Q9Y6F6 885 aa20.92■□□□□ 0.94
PDLIM7-216ENST00000506537 MOXD2PA6NHM9 499 aa20.91■□□□□ 0.94
PDLIM7-216ENST00000506537 CDKL5O76039 1030 aa20.91■□□□□ 0.94
PDLIM7-216ENST00000506537 ARHGAP1Q07960 439 aa20.91■□□□□ 0.94
PDLIM7-216ENST00000506537 SEMA3FQ13275 785 aa20.91■□□□□ 0.94
PDLIM7-216ENST00000506537 SNX17Q15036 470 aa20.91■□□□□ 0.94
PDLIM7-216ENST00000506537 CCDC12Q8WUD4 166 aaPredicted RBP20.91■□□□□ 0.94
PDLIM7-216ENST00000506537 ANO3Q9BYT9 981 aa20.91■□□□□ 0.94
PDLIM7-216ENST00000506537 GLT8D2Q9H1C3 349 aa20.91■□□□□ 0.94
PDLIM7-216ENST00000506537 STK36Q9NRP7 1315 aa20.91■□□□□ 0.94
PDLIM7-216ENST00000506537 RTEL1Q9NZ71 1219 aa20.91■□□□□ 0.94
PDLIM7-216ENST00000506537 SP2Q02086 613 aa20.9■□□□□ 0.94
PDLIM7-216ENST00000506537 RABEP1Q15276 862 aa20.9■□□□□ 0.94
PDLIM7-216ENST00000506537 XRRA1Q6P2D8 792 aa20.9■□□□□ 0.94
PDLIM7-216ENST00000506537 SLC39A5Q6ZMH5 540 aa20.9■□□□□ 0.94
PDLIM7-216ENST00000506537 PCSK9Q8NBP7 692 aaKnown RBP20.9■□□□□ 0.94
PDLIM7-216ENST00000506537 CCDC148Q8NFR7 591 aa20.9■□□□□ 0.94
PDLIM7-216ENST00000506537 SH3GLB2Q9NR46 395 aa20.9■□□□□ 0.94
PDLIM7-216ENST00000506537 LIMCH1Q9UPQ0 1083 aa20.9■□□□□ 0.94
PDLIM7-216ENST00000506537 EVI5O60447 810 aa20.89■□□□□ 0.93
PDLIM7-216ENST00000506537 STAM2O75886 525 aa20.89■□□□□ 0.93
PDLIM7-216ENST00000506537 UBA1P22314 1058 aaKnown RBP20.89■□□□□ 0.93
PDLIM7-216ENST00000506537 AP3B2Q13367 1082 aa20.89■□□□□ 0.93
PDLIM7-216ENST00000506537 JAKMIP3Q5VZ66 844 aa20.89■□□□□ 0.93
PDLIM7-216ENST00000506537 C7orf61Q8IZ16 206 aa20.89■□□□□ 0.93
PDLIM7-216ENST00000506537 NSUN7Q8NE18 718 aaKnown RBP20.89■□□□□ 0.93
PDLIM7-216ENST00000506537 RASGRP4Q8TDF6 673 aa20.89■□□□□ 0.93
PDLIM7-216ENST00000506537 C6orf50Q9HD87 102 aa20.89■□□□□ 0.93
PDLIM7-216ENST00000506537 CEP290O15078 2479 aa20.89■□□□□ 0.93
PDLIM7-216ENST00000506537 JAK2O60674 1132 aa20.88■□□□□ 0.93
PDLIM7-216ENST00000506537 FOSP01100 380 aaPredicted RBP20.88■□□□□ 0.93
PDLIM7-216ENST00000506537 GH1P01241 217 aa20.88■□□□□ 0.93
PDLIM7-216ENST00000506537 FDPSP14324 419 aaKnown RBP20.88■□□□□ 0.93
PDLIM7-216ENST00000506537 ITGB5P18084 799 aa20.88■□□□□ 0.93
PDLIM7-216ENST00000506537 ICAM3P32942 547 aa20.88■□□□□ 0.93
PDLIM7-216ENST00000506537 RTP1P59025 263 aa20.88■□□□□ 0.93
PDLIM7-216ENST00000506537 NPY5RQ15761 445 aa20.88■□□□□ 0.93
PDLIM7-216ENST00000506537 CXCL17Q6UXB2 119 aa20.88■□□□□ 0.93
PDLIM7-216ENST00000506537 REXO1Q8N1G1 1221 aaKnown RBP20.88■□□□□ 0.93
PDLIM7-216ENST00000506537 STARD7Q9NQZ5 370 aa20.88■□□□□ 0.93
PDLIM7-216ENST00000506537 UBIAD1Q9Y5Z9 338 aa20.88■□□□□ 0.93
PDLIM7-216ENST00000506537 DOCK5Q9H7D0 1870 aa20.88■□□□□ 0.93
PDLIM7-216ENST00000506537 A6NJR5 290 aa20.87■□□□□ 0.93
PDLIM7-216ENST00000506537 SPATA31C2B4DYI2 1134 aa20.87■□□□□ 0.93
PDLIM7-216ENST00000506537 SORBS3O60504 671 aa20.87■□□□□ 0.93
PDLIM7-216ENST00000506537 CD2BP2O95400 341 aaKnown RBP20.87■□□□□ 0.93
PDLIM7-216ENST00000506537 GNA11P29992 359 aa20.87■□□□□ 0.93
PDLIM7-216ENST00000506537 SREBF1P36956 1147 aa20.87■□□□□ 0.93
PDLIM7-216ENST00000506537 CPT1AP50416 773 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms