RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 GTF2A1LQ9UNN4 478 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 GRIN2AQ12879 1464 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 B4DLN1 442 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 S100A9P06702 114 aaKnown RBP6.78□□□□□ -1.32
CLCN3-204ENST00000504131 KRT16P08779 473 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 PCP11498 1178 aaKnown RBP6.78□□□□□ -1.32
CLCN3-204ENST00000504131 ACTN1P12814 892 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 RCN2Q14257 317 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 ARSHQ5FYA8 562 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 CCDC183Q5T5S1 534 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 PI16Q6UXB8 463 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 C7orf57Q8NEG2 295 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 L3MBTL2Q969R5 705 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 NACC2Q96BF6 587 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 SRPK1Q96SB4 655 aaKnown RBP6.78□□□□□ -1.32
CLCN3-204ENST00000504131 EPAS1Q99814 870 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 TRIM55Q9BYV6 548 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 SLC38A10Q9HBR0 1119 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 POLR3EQ9NVU0 708 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 EHD2Q9NZN4 543 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 ADAM21Q9UKJ8 722 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 ESYT2A0FGR8 921 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 KIF23Q02241 960 aaPredicted RBP6.78□□□□□ -1.32
CLCN3-204ENST00000504131 PTK2Q05397 1052 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 ACAP2Q15057 778 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 RGS9BPQ6ZS82 235 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 C12orf50Q8NA57 414 aaPredicted RBP6.78□□□□□ -1.32
CLCN3-204ENST00000504131 GOLM1Q8NBJ4 401 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 LSM14AQ8ND56 463 aaKnown RBP6.78□□□□□ -1.32
CLCN3-204ENST00000504131 CPLX3Q8WVH0 158 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 CDCA7LQ96GN5 454 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 CORO1BQ9BR76 489 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 DIABLOQ9NR28 239 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 GID8Q9NWU2 228 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 FPGT-TNNI3KV9GXZ4 949 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 C21orf2O43822 256 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 TUBB4AP04350 444 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 CALB1P05937 261 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 HNRNPMP52272 730 aaKnown RBP eCLIP6.78□□□□□ -1.32
CLCN3-204ENST00000504131 CSTF3Q12996 717 aaKnown RBP6.78□□□□□ -1.32
CLCN3-204ENST00000504131 CASP8Q14790 479 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 ANKDD1AQ495B1 522 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 KCTD16Q68DU8 428 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 PACS1Q6VY07 963 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 UCMAQ8WVF2 138 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 ASIC4Q96FT7 647 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 YME1L1Q96TA2 773 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 UBE2OQ9C0C9 1292 aaKnown RBP6.78□□□□□ -1.32
CLCN3-204ENST00000504131 ATP6V0A4Q9HBG4 840 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.78□□□□□ -1.32
CLCN3-204ENST00000504131 XPO7Q9UIA9 1087 aaKnown RBP6.78□□□□□ -1.32
CLCN3-204ENST00000504131 SCAMP1O15126 338 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 TTI1O43156 1089 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 MRPS5P82675 430 aaKnown RBP6.77□□□□□ -1.33
CLCN3-204ENST00000504131 TCEAL1Q15170 157 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 BOLA3Q53S33 107 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 WDR45BQ5MNZ6 344 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 CDKL2Q92772 493 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 ACAP3Q96P50 834 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 RBSNQ9H1K0 784 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 CAAP1Q9H8G2 361 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 ANLNQ9NQW6 1124 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 hCG_1984214I3L0E3 225 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 GNPATO15228 680 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 IDH1O75874 414 aaKnown RBP6.77□□□□□ -1.33
CLCN3-204ENST00000504131 RASA1P20936 1047 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 DNAJB2P25686 324 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 PLCD1P51178 756 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 GNGT1P63211 74 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 CYTH1Q15438 398 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 TSC22D1Q15714 1073 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 CRTC1Q6UUV9 634 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 FAM71BQ8TC56 605 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 PSKH2Q96QS6 385 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 ZFATQ9P243 1243 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 FAM8A1Q9UBU6 413 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 INPP5FQ9Y2H2 1132 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 CD109Q6YHK3 1445 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 POTEB3A0JP26 581 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 C9IYK1 514 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 GOLGA8KD6RF30 607 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 ZSCAN9O15535 394 aaPredicted RBP6.77□□□□□ -1.33
CLCN3-204ENST00000504131 SULT1B1O43704 296 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 NMT2O60551 498 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 ATF4P18848 351 aaPredicted RBP6.77□□□□□ -1.33
CLCN3-204ENST00000504131 GPTP24298 496 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 PICALMQ13492 652 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 STK11Q15831 433 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 PLA2G4EQ3MJ16 856 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 POTEBQ6S5H4 581 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 NPLOC4Q8TAT6 608 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 GDAP1Q8TB36 358 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 PBXIP1Q96AQ6 731 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 ZMYND8Q9ULU4 1186 aaPredicted RBP6.77□□□□□ -1.33
CLCN3-204ENST00000504131 BRD4O60885 1362 aaPredicted RBP6.77□□□□□ -1.33
CLCN3-204ENST00000504131 IFIT1P09914 478 aaKnown RBP6.77□□□□□ -1.33
CLCN3-204ENST00000504131 NPR1P16066 1061 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 DSTNP60981 165 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 MOGSQ13724 837 aa6.77□□□□□ -1.33
CLCN3-204ENST00000504131 FAM133BQ5BKY9 247 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms