RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 KRT12Q99456 494 aa14.29□□□□□ -0.12
VEGFA-215ENST00000497139 MTRQ99707 1265 aa14.29□□□□□ -0.12
VEGFA-215ENST00000497139 TAOK2Q9UL54 1235 aa14.29□□□□□ -0.12
VEGFA-215ENST00000497139 GDAQ9Y2T3 454 aa14.29□□□□□ -0.12
VEGFA-215ENST00000497139 SSU72P8A0A1W2PR75 194 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 RBAK-RBAKDNI3L0D1 243 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 AKR1B10O60218 316 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 ATP2C2O75185 946 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 FLOT1O75955 427 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 WFS1O76024 890 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 NQO1P15559 274 aaKnown RBP14.28□□□□□ -0.12
VEGFA-215ENST00000497139 ADD2P35612 726 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 UBE3CQ15386 1083 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 UAP1Q16222 522 aaPredicted RBP14.28□□□□□ -0.12
VEGFA-215ENST00000497139 KRT26Q7Z3Y9 468 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 PNMA8AQ86V59 439 aaPredicted RBP14.28□□□□□ -0.12
VEGFA-215ENST00000497139 TLCD1Q96CP7 247 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 INPP4AQ96PE3 977 aaPredicted RBP14.28□□□□□ -0.12
VEGFA-215ENST00000497139 ZNF317Q96PQ6 595 aaPredicted RBP14.28□□□□□ -0.12
VEGFA-215ENST00000497139 PHF20Q9BVI0 1012 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 EDEM3Q9BZQ6 932 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 NSRP1Q9H0G5 558 aaKnown RBP14.28□□□□□ -0.12
VEGFA-215ENST00000497139 CNOT8Q9UFF9 292 aaKnown RBP14.28□□□□□ -0.12
VEGFA-215ENST00000497139 PCDHGC5Q9Y5F6 944 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 MYH10P35580 1976 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 MYH2Q9UKX2 1941 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 ZSCAN5CA6NGD5 496 aaPredicted RBP14.28□□□□□ -0.12
VEGFA-215ENST00000497139 LINGO3P0C6S8 592 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 EIF4A3P38919 411 aaKnown RBP14.28□□□□□ -0.12
VEGFA-215ENST00000497139 ZC3H12AQ5D1E8 599 aaKnown RBP14.28□□□□□ -0.12
VEGFA-215ENST00000497139 ZNF790Q6PG37 636 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 TRPM8Q7Z2W7 1104 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 PLBD2Q8NHP8 589 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 UBAC1Q9BSL1 405 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 CCDC134Q9H6E4 229 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 SAMD15Q9P1V8 674 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 DENND2AQ9ULE3 1009 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 TRIM49BA6NDI0 452 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 PHF20L1A8MW92 1017 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 NCK2O43639 380 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 DIAPH2O60879 1101 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 RHOBTB3O94955 611 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 ECHS1P30084 290 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 TTC38Q5R3I4 469 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 GIGYF2Q6Y7W6 1299 aaKnown RBP14.28□□□□□ -0.12
VEGFA-215ENST00000497139 USP38Q8NB14 1042 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 PCMTD1Q96MG8 357 aaPredicted RBP14.28□□□□□ -0.12
VEGFA-215ENST00000497139 ANKIB1Q9P2G1 1089 aa14.28□□□□□ -0.12
VEGFA-215ENST00000497139 RAD51CO43502 376 aa14.27□□□□□ -0.12
VEGFA-215ENST00000497139 LONP1P36776 959 aaKnown RBP14.27□□□□□ -0.12
VEGFA-215ENST00000497139 HLTFQ14527 1009 aaKnown RBP eCLIP14.27□□□□□ -0.124e-40■■□□□ 11.4
VEGFA-215ENST00000497139 ARL6IP4Q66PJ3 421 aaKnown RBP14.27□□□□□ -0.12
VEGFA-215ENST00000497139 TYW1BQ6NUM6 668 aa14.27□□□□□ -0.12
VEGFA-215ENST00000497139 GIMAP8Q8ND71 665 aaPredicted RBP14.27□□□□□ -0.12
VEGFA-215ENST00000497139 STAMQ92783 540 aa14.27□□□□□ -0.12
VEGFA-215ENST00000497139 MS4A14Q96JA4 679 aa14.27□□□□□ -0.12
VEGFA-215ENST00000497139 PSMB7Q99436 277 aa14.27□□□□□ -0.12
VEGFA-215ENST00000497139 TSC22D3Q99576 134 aa14.27□□□□□ -0.12
VEGFA-215ENST00000497139 YIPF3Q9GZM5 350 aa14.27□□□□□ -0.12
VEGFA-215ENST00000497139 NOVA2Q9UNW9 492 aaKnown RBP14.27□□□□□ -0.12
VEGFA-215ENST00000497139 L3MBTL1Q9Y468 752 aa14.27□□□□□ -0.12
VEGFA-215ENST00000497139 ABCB11O95342 1321 aa14.27□□□□□ -0.13
VEGFA-215ENST00000497139 VIMP08670 466 aaKnown RBP14.27□□□□□ -0.13
VEGFA-215ENST00000497139 KIF5BP33176 963 aa14.27□□□□□ -0.13
VEGFA-215ENST00000497139 CCDC84Q86UT8 332 aaPredicted RBP14.27□□□□□ -0.13
VEGFA-215ENST00000497139 HOOK3Q86VS8 718 aa14.27□□□□□ -0.13
VEGFA-215ENST00000497139 CSGALNACT2Q8N6G5 542 aa14.27□□□□□ -0.13
VEGFA-215ENST00000497139 IFT74Q96LB3 600 aa14.27□□□□□ -0.13
VEGFA-215ENST00000497139 PAIP2Q9BPZ3 127 aaKnown RBP14.27□□□□□ -0.13
VEGFA-215ENST00000497139 PAPOLBQ9NRJ5 636 aaKnown RBP14.27□□□□□ -0.13
VEGFA-215ENST00000497139 ZSWIM5Q9P217 1185 aa14.27□□□□□ -0.13
VEGFA-215ENST00000497139 TJP1Q07157 1748 aa14.26□□□□□ -0.13
VEGFA-215ENST00000497139 E7ENQ6 273 aa14.26□□□□□ -0.13
VEGFA-215ENST00000497139 NPTXRO95502 500 aa14.26□□□□□ -0.13
VEGFA-215ENST00000497139 ATP2A2P16615 1042 aaKnown RBP14.26□□□□□ -0.13
VEGFA-215ENST00000497139 ATP4AP20648 1035 aa14.26□□□□□ -0.13
VEGFA-215ENST00000497139 ZAP70P43403 619 aa14.26□□□□□ -0.13
VEGFA-215ENST00000497139 MAGOHP61326 146 aaKnown RBP14.26□□□□□ -0.13
VEGFA-215ENST00000497139 MRPS35P82673 323 aaKnown RBP14.26□□□□□ -0.13
VEGFA-215ENST00000497139 WTAPQ15007 396 aa14.26□□□□□ -0.13
VEGFA-215ENST00000497139 LRRC24Q50LG9 513 aa14.26□□□□□ -0.13
VEGFA-215ENST00000497139 MEI1Q5TIA1 1274 aa14.26□□□□□ -0.13
VEGFA-215ENST00000497139 TBC1D1Q86TI0 1168 aaPredicted RBP14.26□□□□□ -0.13
VEGFA-215ENST00000497139 C2CD5Q86YS7 1000 aa14.26□□□□□ -0.13
VEGFA-215ENST00000497139 KCNH5Q8NCM2 988 aa14.26□□□□□ -0.13
VEGFA-215ENST00000497139 NKX2-3Q8TAU0 364 aa14.26□□□□□ -0.13
VEGFA-215ENST00000497139 MAGOHBQ96A72 148 aaKnown RBP14.26□□□□□ -0.13
VEGFA-215ENST00000497139 MTMR8Q96EF0 704 aa14.26□□□□□ -0.13
VEGFA-215ENST00000497139 ZNF512BQ96KM6 892 aaPredicted RBP14.26□□□□□ -0.13
VEGFA-215ENST00000497139 PANK4Q9NVE7 773 aa14.26□□□□□ -0.13
VEGFA-215ENST00000497139 CCNE1P24864 410 aa14.26□□□□□ -0.13
VEGFA-215ENST00000497139 PTGDRQ13258 359 aa14.26□□□□□ -0.13
VEGFA-215ENST00000497139 ASTE1Q2TB18 679 aaPredicted RBP14.26□□□□□ -0.13
VEGFA-215ENST00000497139 MIIPQ5JXC2 388 aa14.26□□□□□ -0.13
VEGFA-215ENST00000497139 MTHFD1LQ6UB35 978 aa14.26□□□□□ -0.13
VEGFA-215ENST00000497139 CROCCP2Q86T23 111 aa14.26□□□□□ -0.13
VEGFA-215ENST00000497139 C14orf37Q86TY3 774 aa14.26□□□□□ -0.13
VEGFA-215ENST00000497139 GALNT15Q8N3T1 639 aa14.26□□□□□ -0.13
VEGFA-215ENST00000497139 FANCBQ8NB91 859 aa14.26□□□□□ -0.13
VEGFA-215ENST00000497139 CNOT6LQ96LI5 555 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms