RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-208ENST00000495777 COG5Q9UP83 839 aa10.28□□□□□ -0.76
SORT1-208ENST00000495777 NOD1Q9Y239 953 aa10.28□□□□□ -0.76
SORT1-208ENST00000495777 ABCB11O95342 1321 aa10.28□□□□□ -0.76
SORT1-208ENST00000495777 GBF1Q92538 1859 aa10.27□□□□□ -0.76
SORT1-208ENST00000495777 KIF28PB7ZC32 967 aa10.27□□□□□ -0.77
SORT1-208ENST00000495777 TLL1O43897 1013 aa10.27□□□□□ -0.77
SORT1-208ENST00000495777 PARNO95453 639 aaKnown RBP10.27□□□□□ -0.77
SORT1-208ENST00000495777 HOXD8P13378 290 aaPredicted RBP10.27□□□□□ -0.77
SORT1-208ENST00000495777 SELPP16109 830 aa10.27□□□□□ -0.77
SORT1-208ENST00000495777 PDE4AP27815 886 aa10.27□□□□□ -0.77
SORT1-208ENST00000495777 MFAP1P55081 439 aaKnown RBP10.27□□□□□ -0.77
SORT1-208ENST00000495777 WDR5P61964 334 aaKnown RBP10.27□□□□□ -0.77
SORT1-208ENST00000495777 GHRHRQ02643 423 aa10.27□□□□□ -0.77
SORT1-208ENST00000495777 GRB10Q13322 594 aa10.27□□□□□ -0.77
SORT1-208ENST00000495777 STXBP2Q15833 593 aa10.27□□□□□ -0.77
SORT1-208ENST00000495777 LY6KQ17RY6 165 aa10.27□□□□□ -0.77
SORT1-208ENST00000495777 ASPRV1Q53RT3 343 aa10.27□□□□□ -0.77
SORT1-208ENST00000495777 CCDC178Q5BJE1 867 aa10.27□□□□□ -0.77
SORT1-208ENST00000495777 TTC22Q5TAA0 569 aa10.27□□□□□ -0.77
SORT1-208ENST00000495777 KRT40Q6A162 431 aa10.27□□□□□ -0.77
SORT1-208ENST00000495777 TRAF7Q6Q0C0 670 aa10.27□□□□□ -0.77
SORT1-208ENST00000495777 LRRC8DQ7L1W4 858 aa10.27□□□□□ -0.77
SORT1-208ENST00000495777 MCF2L2Q86YR7 1114 aa10.27□□□□□ -0.77
SORT1-208ENST00000495777 ADGRF4Q8IZF3 695 aa10.27□□□□□ -0.77
SORT1-208ENST00000495777 PNMA1Q8ND90 353 aa10.27□□□□□ -0.77
SORT1-208ENST00000495777 ARNTL2Q8WYA1 636 aa10.27□□□□□ -0.77
SORT1-208ENST00000495777 TAAR1Q96RJ0 339 aa10.27□□□□□ -0.77
SORT1-208ENST00000495777 ZKSCAN3Q9BRR0 538 aa10.27□□□□□ -0.77
SORT1-208ENST00000495777 CERS4Q9HA82 394 aa10.27□□□□□ -0.77
SORT1-208ENST00000495777 GTF2IRD1Q9UHL9 959 aa10.27□□□□□ -0.77
SORT1-208ENST00000495777 RAPGEFL1Q9UHV5 662 aa10.27□□□□□ -0.77
SORT1-208ENST00000495777 DDX41Q9UJV9 622 aaKnown RBP10.27□□□□□ -0.77
SORT1-208ENST00000495777 TANC1Q9C0D5 1861 aa10.27□□□□□ -0.77
SORT1-208ENST00000495777 PRRC2BQ5JSZ5 2229 aaKnown RBP10.26□□□□□ -0.77
SORT1-208ENST00000495777 LCHNA4D1U4 455 aa10.26□□□□□ -0.77
SORT1-208ENST00000495777 HAS3O00219 553 aa10.26□□□□□ -0.77
SORT1-208ENST00000495777 ZNF213O14771 459 aa10.26□□□□□ -0.77
SORT1-208ENST00000495777 F2P00734 622 aa10.26□□□□□ -0.77
SORT1-208ENST00000495777 SDSP20132 328 aa10.26□□□□□ -0.77
SORT1-208ENST00000495777 CASTP20810 708 aaKnown RBP10.26□□□□□ -0.77
SORT1-208ENST00000495777 SKIV2LQ15477 1246 aaKnown RBP10.26□□□□□ -0.77
SORT1-208ENST00000495777 DGKDQ16760 1214 aa10.26□□□□□ -0.77
SORT1-208ENST00000495777 TRIM71Q2Q1W2 868 aaKnown RBP10.26□□□□□ -0.77
SORT1-208ENST00000495777 QRICH1Q2TAL8 776 aa10.26□□□□□ -0.77
SORT1-208ENST00000495777 CNKSR3Q6P9H4 555 aa10.26□□□□□ -0.77
SORT1-208ENST00000495777 CASC1Q6TDU7 716 aa10.26□□□□□ -0.77
SORT1-208ENST00000495777 SEPT14Q6ZU15 432 aa10.26□□□□□ -0.77
SORT1-208ENST00000495777 SPRED2Q7Z698 418 aa10.26□□□□□ -0.77
SORT1-208ENST00000495777 IQCA1Q86XH1 822 aa10.26□□□□□ -0.77
SORT1-208ENST00000495777 PPTC7Q8NI37 304 aa10.26□□□□□ -0.77
SORT1-208ENST00000495777 RMDN3Q96TC7 470 aa10.26□□□□□ -0.77
SORT1-208ENST00000495777 C1QTNF1Q9BXJ1 281 aa10.26□□□□□ -0.77
SORT1-208ENST00000495777 JMJD4Q9H9V9 463 aa10.26□□□□□ -0.77
SORT1-208ENST00000495777 LMCD1Q9NZU5 365 aa10.26□□□□□ -0.77
SORT1-208ENST00000495777 MYO9BQ13459 2157 aa10.26□□□□□ -0.77
SORT1-208ENST00000495777 ABHD14A-ACY1A0A1B0GW23 586 aa10.25□□□□□ -0.77
SORT1-208ENST00000495777 TRIM6-TRIM34B2RNG4 842 aa10.25□□□□□ -0.77
SORT1-208ENST00000495777 OPLAHO14841 1288 aa10.25□□□□□ -0.77
SORT1-208ENST00000495777 NBNO60934 754 aa10.25□□□□□ -0.77
SORT1-208ENST00000495777 EFCAB14O75071 495 aa10.25□□□□□ -0.77
SORT1-208ENST00000495777 KDM4AO75164 1064 aa10.25□□□□□ -0.77
SORT1-208ENST00000495777 EIF3JO75822 258 aaKnown RBP10.25□□□□□ -0.77
SORT1-208ENST00000495777 GJB5O95377 273 aa10.25□□□□□ -0.77
SORT1-208ENST00000495777 CKBP12277 381 aa10.25□□□□□ -0.77
SORT1-208ENST00000495777 PLA2G5P39877 138 aa10.25□□□□□ -0.77
SORT1-208ENST00000495777 KCNJ6P48051 423 aa10.25□□□□□ -0.77
SORT1-208ENST00000495777 PSEN2P49810 448 aa10.25□□□□□ -0.77
SORT1-208ENST00000495777 HSD17B4P51659 736 aa10.25□□□□□ -0.77
SORT1-208ENST00000495777 DEFB103AP81534 67 aa10.25□□□□□ -0.77
SORT1-208ENST00000495777 PTK7Q13308 1070 aa10.25□□□□□ -0.77
SORT1-208ENST00000495777 MKRN4PQ13434 485 aaPredicted RBP10.25□□□□□ -0.77
SORT1-208ENST00000495777 TCTN1Q2MV58 587 aa10.25□□□□□ -0.77
SORT1-208ENST00000495777 FBXO11Q86XK2 927 aa10.25□□□□□ -0.77
SORT1-208ENST00000495777 ENAHQ8N8S7 591 aaPredicted RBP10.25□□□□□ -0.77
SORT1-208ENST00000495777 HLA-CQ95604 372 aa10.25□□□□□ -0.77
SORT1-208ENST00000495777 ZSCAN10Q96SZ4 725 aaPredicted RBP10.25□□□□□ -0.77
SORT1-208ENST00000495777 KATNAL1Q9BW62 490 aa10.25□□□□□ -0.77
SORT1-208ENST00000495777 KAT14Q9H8E8 782 aa10.25□□□□□ -0.77
SORT1-208ENST00000495777 PXMP2Q9NR77 195 aa10.25□□□□□ -0.77
SORT1-208ENST00000495777 HDAC6Q9UBN7 1215 aa10.25□□□□□ -0.77
SORT1-208ENST00000495777 MRPL11Q9Y3B7 192 aaKnown RBP10.25□□□□□ -0.77
SORT1-208ENST00000495777 SCN5AQ14524 2016 aa10.24□□□□□ -0.77
SORT1-208ENST00000495777 RGS20O76081 388 aa10.24□□□□□ -0.77
SORT1-208ENST00000495777 NR3C2P08235 984 aa10.24□□□□□ -0.77
SORT1-208ENST00000495777 EIF2AK2P19525 551 aaKnown RBP10.24□□□□□ -0.77
SORT1-208ENST00000495777 ERVK-21P61565 698 aa10.24□□□□□ -0.77
SORT1-208ENST00000495777 LAMC2Q13753 1193 aa10.24□□□□□ -0.77
SORT1-208ENST00000495777 MBTPS1Q14703 1052 aa10.24□□□□□ -0.77
SORT1-208ENST00000495777 MFSD10Q14728 455 aa10.24□□□□□ -0.77
SORT1-208ENST00000495777 ARHGEF16Q5VV41 709 aa10.24□□□□□ -0.77
SORT1-208ENST00000495777 CHST3Q7LGC8 479 aa10.24□□□□□ -0.77
SORT1-208ENST00000495777 TMCO2Q7Z6W1 182 aaPredicted RBP10.24□□□□□ -0.77
SORT1-208ENST00000495777 C7orf31Q8N865 590 aa10.24□□□□□ -0.77
SORT1-208ENST00000495777 WNT8BQ93098 351 aa10.24□□□□□ -0.77
SORT1-208ENST00000495777 RILPL2Q969X0 211 aa10.24□□□□□ -0.77
SORT1-208ENST00000495777 MTMR8Q96EF0 704 aa10.24□□□□□ -0.77
SORT1-208ENST00000495777 RAD9AQ99638 391 aa10.24□□□□□ -0.77
SORT1-208ENST00000495777 DSCC1Q9BVC3 393 aa10.24□□□□□ -0.77
SORT1-208ENST00000495777 MAP3K20Q9NYL2 800 aaKnown RBP10.24□□□□□ -0.77
SORT1-208ENST00000495777 ZSWIM5Q9P217 1185 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms