RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 LONRF2Q1L5Z9 754 aa8.03□□□□□ -1.12
NCKAP1-208ENST00000495619 TCERG1LQ5VWI1 586 aa8.03□□□□□ -1.12
NCKAP1-208ENST00000495619 CNKSR3Q6P9H4 555 aa8.03□□□□□ -1.12
NCKAP1-208ENST00000495619 SIAH1Q8IUQ4 282 aa8.03□□□□□ -1.12
NCKAP1-208ENST00000495619 IRF2BPLQ9H1B7 796 aa8.03□□□□□ -1.12
NCKAP1-208ENST00000495619 CLDND1Q9NY35 253 aa8.03□□□□□ -1.12
NCKAP1-208ENST00000495619 KDM2BQ8NHM5 1336 aa8.03□□□□□ -1.12
NCKAP1-208ENST00000495619 IRS2Q9Y4H2 1338 aa8.03□□□□□ -1.12
NCKAP1-208ENST00000495619 DGKIO75912 1065 aa8.02□□□□□ -1.13
NCKAP1-208ENST00000495619 NCKAP1LP55160 1127 aa8.02□□□□□ -1.13
NCKAP1-208ENST00000495619 DENND5AQ6IQ26 1287 aa8.02□□□□□ -1.13
NCKAP1-208ENST00000495619 IGDCC3Q8IVU1 814 aa8.02□□□□□ -1.13
NCKAP1-208ENST00000495619 Q8N1Y9 231 aa8.02□□□□□ -1.13
NCKAP1-208ENST00000495619 ZBTB38Q8NAP3 1195 aaPredicted RBP8.02□□□□□ -1.13
NCKAP1-208ENST00000495619 UBXN4Q92575 508 aa8.02□□□□□ -1.13
NCKAP1-208ENST00000495619 DDX11Q96FC9 970 aa8.02□□□□□ -1.13
NCKAP1-208ENST00000495619 DNAJC2Q99543 621 aaKnown RBP8.02□□□□□ -1.13
NCKAP1-208ENST00000495619 PHF20Q9BVI0 1012 aa8.02□□□□□ -1.13
NCKAP1-208ENST00000495619 RXFP1Q9HBX9 757 aa8.02□□□□□ -1.13
NCKAP1-208ENST00000495619 PCDH18Q9HCL0 1135 aa8.02□□□□□ -1.13
NCKAP1-208ENST00000495619 IRS4O14654 1257 aaPredicted RBP8.01□□□□□ -1.13
NCKAP1-208ENST00000495619 PI3P19957 117 aa8.01□□□□□ -1.13
NCKAP1-208ENST00000495619 FPR2P25090 351 aa8.01□□□□□ -1.13
NCKAP1-208ENST00000495619 SUMO1P63165 101 aaKnown RBP8.01□□□□□ -1.13
NCKAP1-208ENST00000495619 IFNL3Q8IZI9 196 aa8.01□□□□□ -1.13
NCKAP1-208ENST00000495619 OSBP2Q969R2 916 aa8.01□□□□□ -1.13
NCKAP1-208ENST00000495619 YIPF4Q9BSR8 244 aa8.01□□□□□ -1.13
NCKAP1-208ENST00000495619 OSBPL2Q9H1P3 480 aa8.01□□□□□ -1.13
NCKAP1-208ENST00000495619 EPB41L1Q9H4G0 881 aa8.01□□□□□ -1.13
NCKAP1-208ENST00000495619 SNTG2Q9NY99 539 aa8.01□□□□□ -1.13
NCKAP1-208ENST00000495619 FBLN5Q9UBX5 448 aa8.01□□□□□ -1.13
NCKAP1-208ENST00000495619 TRBV23-1A0A0A0MS06 115 aa8□□□□□ -1.13
NCKAP1-208ENST00000495619 KRIT1O00522 736 aa8□□□□□ -1.13
NCKAP1-208ENST00000495619 ZSCAN22P10073 491 aaPredicted RBP8□□□□□ -1.13
NCKAP1-208ENST00000495619 LCP1P13796 627 aa8□□□□□ -1.13
NCKAP1-208ENST00000495619 NAT1P18440 290 aa8□□□□□ -1.13
NCKAP1-208ENST00000495619 RASA3Q14644 834 aa8□□□□□ -1.13
NCKAP1-208ENST00000495619 KIZQ2M2Z5 673 aa8□□□□□ -1.13
NCKAP1-208ENST00000495619 MILR1Q7Z6M3 343 aa8□□□□□ -1.13
NCKAP1-208ENST00000495619 CPA5Q8WXQ8 436 aa8□□□□□ -1.13
NCKAP1-208ENST00000495619 ALG1Q9BT22 464 aa8□□□□□ -1.13
NCKAP1-208ENST00000495619 NGRNQ9NPE2 291 aaKnown RBP8□□□□□ -1.13
NCKAP1-208ENST00000495619 NUB1Q9Y5A7 615 aa8□□□□□ -1.13
NCKAP1-208ENST00000495619 HCFC2Q9Y5Z7 792 aa8□□□□□ -1.13
NCKAP1-208ENST00000495619 ARNTLO00327 626 aa7.99□□□□□ -1.13
NCKAP1-208ENST00000495619 HGSO14964 777 aaPredicted RBP7.99□□□□□ -1.13
NCKAP1-208ENST00000495619 ASGR2P07307 311 aa7.99□□□□□ -1.13
NCKAP1-208ENST00000495619 PMLP29590 882 aa7.99□□□□□ -1.13
NCKAP1-208ENST00000495619 GPR85P60893 370 aa7.99□□□□□ -1.13
NCKAP1-208ENST00000495619 SSPNQ14714 243 aa7.99□□□□□ -1.13
NCKAP1-208ENST00000495619 LCE3BQ5TA77 95 aa7.99□□□□□ -1.13
NCKAP1-208ENST00000495619 STYK1Q6J9G0 422 aa7.99□□□□□ -1.13
NCKAP1-208ENST00000495619 ZC3H18Q86VM9 953 aaKnown RBP7.99□□□□□ -1.13
NCKAP1-208ENST00000495619 AMIGO3Q86WK7 504 aa7.99□□□□□ -1.13
NCKAP1-208ENST00000495619 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.99□□□□□ -1.13
NCKAP1-208ENST00000495619 AQP7O14520 342 aa7.98□□□□□ -1.13
NCKAP1-208ENST00000495619 ADCY3O60266 1144 aa7.98□□□□□ -1.13
NCKAP1-208ENST00000495619 AFF3P51826 1226 aaKnown RBP7.98□□□□□ -1.13
NCKAP1-208ENST00000495619 FOXO4P98177 505 aa7.98□□□□□ -1.13
NCKAP1-208ENST00000495619 YOD1Q5VVQ6 348 aaPredicted RBP7.98□□□□□ -1.13
NCKAP1-208ENST00000495619 STEAP3Q658P3 488 aa7.98□□□□□ -1.13
NCKAP1-208ENST00000495619 LBX2Q6XYB7 198 aa7.98□□□□□ -1.13
NCKAP1-208ENST00000495619 ETV3LQ6ZN32 361 aa7.98□□□□□ -1.13
NCKAP1-208ENST00000495619 MAMDC2Q7Z304 686 aaPredicted RBP7.98□□□□□ -1.13
NCKAP1-208ENST00000495619 NLRP10Q86W26 655 aa7.98□□□□□ -1.13
NCKAP1-208ENST00000495619 FAM129CQ86XR2 697 aa7.98□□□□□ -1.13
NCKAP1-208ENST00000495619 CILP2Q8IUL8 1156 aa7.98□□□□□ -1.13
NCKAP1-208ENST00000495619 MRFAP1L1Q96HT8 127 aa7.98□□□□□ -1.13
NCKAP1-208ENST00000495619 PWWP2AQ96N64 755 aa7.98□□□□□ -1.13
NCKAP1-208ENST00000495619 DNAJC7Q99615 494 aa7.98□□□□□ -1.13
NCKAP1-208ENST00000495619 PALD1Q9ULE6 856 aa7.98□□□□□ -1.13
NCKAP1-208ENST00000495619 SIT1Q9Y3P8 196 aa7.98□□□□□ -1.13
NCKAP1-208ENST00000495619 CCDC163A0A0D9SF12 145 aa7.97□□□□□ -1.13
NCKAP1-208ENST00000495619 FAM221BA6H8Z2 402 aa7.97□□□□□ -1.13
NCKAP1-208ENST00000495619 BTBD11A6QL63 1104 aa7.97□□□□□ -1.13
NCKAP1-208ENST00000495619 DIAPH1O60610 1272 aaKnown RBP7.97□□□□□ -1.13
NCKAP1-208ENST00000495619 IGFBP6P24592 240 aaPredicted RBP7.97□□□□□ -1.13
NCKAP1-208ENST00000495619 CACNB2Q08289 660 aaPredicted RBP7.97□□□□□ -1.13
NCKAP1-208ENST00000495619 SPIRE1Q08AE8 756 aa7.97□□□□□ -1.13
NCKAP1-208ENST00000495619 B3GNT8Q7Z7M8 397 aa7.97□□□□□ -1.13
NCKAP1-208ENST00000495619 PHOSPHO1Q8TCT1 267 aa7.97□□□□□ -1.13
NCKAP1-208ENST00000495619 PTPRN2Q92932 1015 aa7.97□□□□□ -1.13
NCKAP1-208ENST00000495619 DHRS4Q9BTZ2 278 aa7.97□□□□□ -1.13
NCKAP1-208ENST00000495619 ZNF652Q9Y2D9 606 aa7.97□□□□□ -1.13
NCKAP1-208ENST00000495619 FAM47E-STBD1D6RA91 191 aa7.96□□□□□ -1.14
NCKAP1-208ENST00000495619 SGSM2O43147 1006 aa7.96□□□□□ -1.14
NCKAP1-208ENST00000495619 FAM153BP0C7A2 387 aa7.96□□□□□ -1.14
NCKAP1-208ENST00000495619 FBLN1P23142 703 aa7.96□□□□□ -1.14
NCKAP1-208ENST00000495619 TRIM48Q8IWZ4 208 aa7.96□□□□□ -1.14
NCKAP1-208ENST00000495619 ZSWIM2Q8NEG5 633 aa7.96□□□□□ -1.14
NCKAP1-208ENST00000495619 THAP3Q8WTV1 239 aaPredicted RBP7.96□□□□□ -1.14
NCKAP1-208ENST00000495619 DACT3Q96B18 629 aaPredicted RBP7.96□□□□□ -1.14
NCKAP1-208ENST00000495619 PCDHB4Q9Y5E5 795 aa7.96□□□□□ -1.14
NCKAP1-208ENST00000495619 PMF1-BGLAPU3KQ54 211 aa7.96□□□□□ -1.14
NCKAP1-208ENST00000495619 CYP2C8P10632 490 aa7.95□□□□□ -1.14
NCKAP1-208ENST00000495619 GRK2P25098 689 aa7.95□□□□□ -1.14
NCKAP1-208ENST00000495619 GRK3P35626 688 aa7.95□□□□□ -1.14
NCKAP1-208ENST00000495619 LIMS1P48059 325 aa7.95□□□□□ -1.14
NCKAP1-208ENST00000495619 GABREP78334 506 aa7.95□□□□□ -1.14
NCKAP1-208ENST00000495619 CAP1Q01518 475 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms