RNA–Protein interactions for RNA: ENST00000495532.1

HLA-DOA-206, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-206ENST00000495532 SAMD11Q96NU1 681 aa13.41□□□□□ -0.26
HLA-DOA-206ENST00000495532 POP1Q99575 1024 aaKnown RBP13.41□□□□□ -0.26
HLA-DOA-206ENST00000495532 FAM86C1Q9NVL1 165 aa13.41□□□□□ -0.26
HLA-DOA-206ENST00000495532 KIAA1217Q5T5P2 1943 aa13.41□□□□□ -0.26
HLA-DOA-206ENST00000495532 FAM186AA6NE01 2351 aa13.4□□□□□ -0.26
HLA-DOA-206ENST00000495532 TMEM221A6NGB7 291 aa13.4□□□□□ -0.26
HLA-DOA-206ENST00000495532 M0R296 226 aa13.4□□□□□ -0.26
HLA-DOA-206ENST00000495532 MBTPS2O43462 519 aa13.4□□□□□ -0.26
HLA-DOA-206ENST00000495532 TXNP10599 105 aaKnown RBP13.4□□□□□ -0.26
HLA-DOA-206ENST00000495532 TRIM71Q2Q1W2 868 aaKnown RBP13.4□□□□□ -0.26
HLA-DOA-206ENST00000495532 TRIM67Q6ZTA4 783 aa13.4□□□□□ -0.26
HLA-DOA-206ENST00000495532 WNT8BQ93098 351 aa13.4□□□□□ -0.26
HLA-DOA-206ENST00000495532 PBXIP1Q96AQ6 731 aa13.4□□□□□ -0.26
HLA-DOA-206ENST00000495532 ZNF287Q9HBT7 754 aa13.4□□□□□ -0.26
HLA-DOA-206ENST00000495532 GTF2IRD1Q9UHL9 959 aa13.4□□□□□ -0.26
HLA-DOA-206ENST00000495532 PTPDC1A2A3K4 754 aa13.39□□□□□ -0.27
HLA-DOA-206ENST00000495532 ZNF316A6NFI3 1004 aaPredicted RBP13.39□□□□□ -0.27
HLA-DOA-206ENST00000495532 LGR5O75473 907 aa13.39□□□□□ -0.27
HLA-DOA-206ENST00000495532 MMP3P08254 477 aa13.39□□□□□ -0.27
HLA-DOA-206ENST00000495532 TSPY3P0CV98 308 aa13.39□□□□□ -0.27
HLA-DOA-206ENST00000495532 TSPY8P0CW00 308 aa13.39□□□□□ -0.27
HLA-DOA-206ENST00000495532 PDE4DQ08499 809 aa13.39□□□□□ -0.27
HLA-DOA-206ENST00000495532 CLUL1Q15846 466 aa13.39□□□□□ -0.27
HLA-DOA-206ENST00000495532 PKN1Q16512 942 aa13.39□□□□□ -0.27
HLA-DOA-206ENST00000495532 ZNF618Q5T7W0 954 aa13.39□□□□□ -0.27
HLA-DOA-206ENST00000495532 RCSD1Q6JBY9 416 aa13.39□□□□□ -0.27
HLA-DOA-206ENST00000495532 ZSCAN25Q6NSZ9 544 aa13.39□□□□□ -0.27
HLA-DOA-206ENST00000495532 FBXO11Q86XK2 927 aa13.39□□□□□ -0.27
HLA-DOA-206ENST00000495532 FTSJ3Q8IY81 847 aaKnown RBP13.39□□□□□ -0.27
HLA-DOA-206ENST00000495532 TMEM192Q8IY95 271 aa13.39□□□□□ -0.27
HLA-DOA-206ENST00000495532 MYOCDQ8IZQ8 938 aa13.39□□□□□ -0.27
HLA-DOA-206ENST00000495532 AFG1LQ8WV93 481 aa13.39□□□□□ -0.27
HLA-DOA-206ENST00000495532 RANBP17Q9H2T7 1088 aaKnown RBP13.39□□□□□ -0.27
HLA-DOA-206ENST00000495532 NCK2O43639 380 aa13.38□□□□□ -0.27
HLA-DOA-206ENST00000495532 TBX10O75333 385 aa13.38□□□□□ -0.27
HLA-DOA-206ENST00000495532 AMHP03971 560 aa13.38□□□□□ -0.27
HLA-DOA-206ENST00000495532 CALML3P27482 149 aa13.38□□□□□ -0.27
HLA-DOA-206ENST00000495532 SMAD4Q13485 552 aaKnown RBP13.38□□□□□ -0.27
HLA-DOA-206ENST00000495532 SUGP1Q8IWZ8 645 aaKnown RBP13.38□□□□□ -0.27
HLA-DOA-206ENST00000495532 FBXL6Q8N531 539 aa13.38□□□□□ -0.27
HLA-DOA-206ENST00000495532 CLEC4DQ8WXI8 215 aa13.38□□□□□ -0.27
HLA-DOA-206ENST00000495532 BCL11AQ9H165 835 aa13.38□□□□□ -0.27
HLA-DOA-206ENST00000495532 HDAC6Q9UBN7 1215 aa13.38□□□□□ -0.27
HLA-DOA-206ENST00000495532 TDO2P48775 406 aa13.37□□□□□ -0.27
HLA-DOA-206ENST00000495532 TFAP4Q01664 338 aa13.37□□□□□ -0.27
HLA-DOA-206ENST00000495532 PDE4BQ07343 736 aa13.37□□□□□ -0.27
HLA-DOA-206ENST00000495532 ARHGAP1Q07960 439 aa13.37□□□□□ -0.27
HLA-DOA-206ENST00000495532 HYAL1Q12794 435 aa13.37□□□□□ -0.27
HLA-DOA-206ENST00000495532 PTK7Q13308 1070 aa13.37□□□□□ -0.27
HLA-DOA-206ENST00000495532 CCDC62Q6P9F0 684 aa13.37□□□□□ -0.27
HLA-DOA-206ENST00000495532 DBF4BQ8NFT6 615 aa13.37□□□□□ -0.27
HLA-DOA-206ENST00000495532 OSBP2Q969R2 916 aa13.37□□□□□ -0.27
HLA-DOA-206ENST00000495532 DMDP11532 3685 aa13.37□□□□□ -0.27
HLA-DOA-206ENST00000495532 MYH7BA7E2Y1 1941 aa13.37□□□□□ -0.27
HLA-DOA-206ENST00000495532 STXBP3O00186 592 aa13.36□□□□□ -0.27
HLA-DOA-206ENST00000495532 VCPP55072 806 aaKnown RBP13.36□□□□□ -0.27
HLA-DOA-206ENST00000495532 RPS6P62753 249 aaKnown RBP13.36□□□□□ -0.27
HLA-DOA-206ENST00000495532 ZXDAP98168 799 aa13.36□□□□□ -0.27
HLA-DOA-206ENST00000495532 RNF207Q6ZRF8 634 aa13.36□□□□□ -0.27
HLA-DOA-206ENST00000495532 C7orf31Q8N865 590 aa13.36□□□□□ -0.27
HLA-DOA-206ENST00000495532 DNERQ8NFT8 737 aa13.36□□□□□ -0.27
HLA-DOA-206ENST00000495532 YME1L1Q96TA2 773 aa13.36□□□□□ -0.27
HLA-DOA-206ENST00000495532 STX8Q9UNK0 236 aa13.36□□□□□ -0.27
HLA-DOA-206ENST00000495532 EMSYQ7Z589 1322 aa13.36□□□□□ -0.27
HLA-DOA-206ENST00000495532 GPAA1O43292 621 aa13.35□□□□□ -0.27
HLA-DOA-206ENST00000495532 GH1P01241 217 aa13.35□□□□□ -0.27
HLA-DOA-206ENST00000495532 LINC00271P0C7V0 271 aa13.35□□□□□ -0.27
HLA-DOA-206ENST00000495532 CASTP20810 708 aaKnown RBP13.35□□□□□ -0.27
HLA-DOA-206ENST00000495532 GTF2F1P35269 517 aaKnown RBP eCLIP13.35□□□□□ -0.27
HLA-DOA-206ENST00000495532 SLC16A2P36021 539 aa13.35□□□□□ -0.27
HLA-DOA-206ENST00000495532 ZNF200P98182 395 aaPredicted RBP13.35□□□□□ -0.27
HLA-DOA-206ENST00000495532 HIC1Q14526 733 aa13.35□□□□□ -0.27
HLA-DOA-206ENST00000495532 PLEKHG4Q58EX7 1191 aa13.35□□□□□ -0.27
HLA-DOA-206ENST00000495532 TTBK2Q6IQ55 1244 aa13.35□□□□□ -0.27
HLA-DOA-206ENST00000495532 BTNL9Q6UXG8 535 aa13.35□□□□□ -0.27
HLA-DOA-206ENST00000495532 APPBP2Q92624 585 aa13.35□□□□□ -0.27
HLA-DOA-206ENST00000495532 TOP1MTQ969P6 601 aa13.35□□□□□ -0.27
HLA-DOA-206ENST00000495532 MPHOSPH6Q99547 160 aaKnown RBP13.35□□□□□ -0.27
HLA-DOA-206ENST00000495532 IL17RBQ9NRM6 502 aa13.35□□□□□ -0.27
HLA-DOA-206ENST00000495532 GVINP1Q7Z2Y8 2422 aa13.35□□□□□ -0.27
HLA-DOA-206ENST00000495532 C5orf67F2Z3F1 127 aa13.34□□□□□ -0.27
HLA-DOA-206ENST00000495532 HAS3O00219 553 aa13.34□□□□□ -0.27
HLA-DOA-206ENST00000495532 LINC01565O15544 149 aa13.34□□□□□ -0.27
HLA-DOA-206ENST00000495532 NMT2O60551 498 aa13.34□□□□□ -0.27
HLA-DOA-206ENST00000495532 F2P00734 622 aa13.34□□□□□ -0.27
HLA-DOA-206ENST00000495532 PSEN2P49810 448 aa13.34□□□□□ -0.27
HLA-DOA-206ENST00000495532 LY6KQ17RY6 165 aa13.34□□□□□ -0.27
HLA-DOA-206ENST00000495532 CCDC96Q2M329 555 aa13.34□□□□□ -0.27
HLA-DOA-206ENST00000495532 IFNL3Q8IZI9 196 aa13.34□□□□□ -0.27
HLA-DOA-206ENST00000495532 ATOH1Q92858 354 aaPredicted RBP13.34□□□□□ -0.27
HLA-DOA-206ENST00000495532 ALG1Q9BT22 464 aa13.34□□□□□ -0.27
HLA-DOA-206ENST00000495532 CD207Q9UJ71 328 aa13.34□□□□□ -0.27
HLA-DOA-206ENST00000495532 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.33□□□□□ -0.28
HLA-DOA-206ENST00000495532 LOC730098B7Z3J9 87 aa13.33□□□□□ -0.28
HLA-DOA-206ENST00000495532 PROB1E7EW31 1015 aa13.33□□□□□ -0.28
HLA-DOA-206ENST00000495532 M0R2C6 588 aa13.33□□□□□ -0.28
HLA-DOA-206ENST00000495532 GRM6O15303 877 aa13.33□□□□□ -0.28
HLA-DOA-206ENST00000495532 RAB11FIP3O75154 756 aa13.33□□□□□ -0.28
HLA-DOA-206ENST00000495532 UPP2O95045 317 aa13.33□□□□□ -0.28
HLA-DOA-206ENST00000495532 APPP05067 770 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms