RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 LENG9Q96B70 501 aa12.93□□□□□ -0.34
MCF2L-231ENST00000494043 ADD3Q9UEY8 706 aaKnown RBP12.93□□□□□ -0.34
MCF2L-231ENST00000494043 SRPRBQ9Y5M8 271 aaKnown RBP12.93□□□□□ -0.34
MCF2L-231ENST00000494043 IVNS1ABPQ9Y6Y0 642 aa12.93□□□□□ -0.34
MCF2L-231ENST00000494043 ASTN1O14525 1302 aa12.92□□□□□ -0.34
MCF2L-231ENST00000494043 IGLV3-22A0A075B6J6 115 aa12.92□□□□□ -0.34
MCF2L-231ENST00000494043 GOLGA6L4A6NEF3 574 aa12.92□□□□□ -0.34
MCF2L-231ENST00000494043 SOWAHBA6NEL2 793 aa12.92□□□□□ -0.34
MCF2L-231ENST00000494043 CUTAO60888 179 aa12.92□□□□□ -0.34
MCF2L-231ENST00000494043 PGK2P07205 417 aa12.92□□□□□ -0.34
MCF2L-231ENST00000494043 NR3C2P08235 984 aa12.92□□□□□ -0.34
MCF2L-231ENST00000494043 CCND2P30279 289 aa12.92□□□□□ -0.34
MCF2L-231ENST00000494043 ALDH5A1P51649 535 aaPredicted RBP12.92□□□□□ -0.34
MCF2L-231ENST00000494043 MRPS9P82933 396 aaKnown RBP12.92□□□□□ -0.34
MCF2L-231ENST00000494043 SETQ01105 290 aaPredicted RBP12.92□□□□□ -0.34
MCF2L-231ENST00000494043 GRB14Q14449 540 aa12.92□□□□□ -0.34
MCF2L-231ENST00000494043 CEP55Q53EZ4 464 aa12.92□□□□□ -0.34
MCF2L-231ENST00000494043 PRR16Q569H4 304 aa12.92□□□□□ -0.34
MCF2L-231ENST00000494043 ADALQ6DHV7 355 aa12.92□□□□□ -0.34
MCF2L-231ENST00000494043 NIPA1Q7RTP0 329 aa12.92□□□□□ -0.34
MCF2L-231ENST00000494043 FGD4Q96M96 766 aa12.92□□□□□ -0.34
MCF2L-231ENST00000494043 MTMR9Q96QG7 549 aa12.92□□□□□ -0.34
MCF2L-231ENST00000494043 IWS1Q96ST2 819 aa12.92□□□□□ -0.34
MCF2L-231ENST00000494043 MXRA8Q9BRK3 442 aa12.92□□□□□ -0.34
MCF2L-231ENST00000494043 CFHR5Q9BXR6 569 aa12.92□□□□□ -0.34
MCF2L-231ENST00000494043 KCNMB3Q9NPA1 279 aa12.92□□□□□ -0.34
MCF2L-231ENST00000494043 UBIAD1Q9Y5Z9 338 aa12.92□□□□□ -0.34
MCF2L-231ENST00000494043 PLXNB2O15031 1838 aa12.92□□□□□ -0.34
MCF2L-231ENST00000494043 ZNF236Q9UL36 1845 aa12.92□□□□□ -0.34
MCF2L-231ENST00000494043 A0A1W2PQ27 194 aa12.91□□□□□ -0.34
MCF2L-231ENST00000494043 A0A1W2PQ64 194 aa12.91□□□□□ -0.34
MCF2L-231ENST00000494043 A0A1W2PQD8 194 aa12.91□□□□□ -0.34
MCF2L-231ENST00000494043 VWA3AA6NCI4 1184 aa12.91□□□□□ -0.34
MCF2L-231ENST00000494043 SLC15A5A6NIM6 579 aa12.91□□□□□ -0.34
MCF2L-231ENST00000494043 MEIS1O00470 390 aa12.91□□□□□ -0.34
MCF2L-231ENST00000494043 TBX3O15119 743 aa12.91□□□□□ -0.34
MCF2L-231ENST00000494043 MYCLP12524 364 aaPredicted RBP12.91□□□□□ -0.34
MCF2L-231ENST00000494043 HSPA6P17066 643 aa12.91□□□□□ -0.34
MCF2L-231ENST00000494043 ITGB5P18084 799 aa12.91□□□□□ -0.34
MCF2L-231ENST00000494043 EDNRBP24530 442 aa12.91□□□□□ -0.34
MCF2L-231ENST00000494043 ADORA2AP29274 412 aa12.91□□□□□ -0.34
MCF2L-231ENST00000494043 GRIN1Q05586 938 aa12.91□□□□□ -0.34
MCF2L-231ENST00000494043 IL17AQ16552 155 aa12.91□□□□□ -0.34
MCF2L-231ENST00000494043 VSIG10LQ86VR7 867 aa12.91□□□□□ -0.34
MCF2L-231ENST00000494043 PLA2G4DQ86XP0 818 aa12.91□□□□□ -0.34
MCF2L-231ENST00000494043 ZNF579Q8NAF0 562 aaKnown RBP12.91□□□□□ -0.34
MCF2L-231ENST00000494043 CYP2W1Q8TAV3 490 aa12.91□□□□□ -0.34
MCF2L-231ENST00000494043 ETNPPLQ8TBG4 499 aa12.91□□□□□ -0.34
MCF2L-231ENST00000494043 HAS1Q92839 578 aa12.91□□□□□ -0.34
MCF2L-231ENST00000494043 CLIC6Q96NY7 704 aa12.91□□□□□ -0.34
MCF2L-231ENST00000494043 LOC102724159A0A0B4J2E5 919 aa12.9□□□□□ -0.34
MCF2L-231ENST00000494043 B4DLN1 442 aa12.9□□□□□ -0.34
MCF2L-231ENST00000494043 MSH4O15457 936 aa12.9□□□□□ -0.34
MCF2L-231ENST00000494043 COBLO75128 1261 aa12.9□□□□□ -0.34
MCF2L-231ENST00000494043 STAM2O75886 525 aa12.9□□□□□ -0.34
MCF2L-231ENST00000494043 MBD3O95983 291 aa12.9□□□□□ -0.34
MCF2L-231ENST00000494043 PWP2Q15269 919 aaKnown RBP12.9□□□□□ -0.34
MCF2L-231ENST00000494043 ZNF792Q3KQV3 632 aa12.9□□□□□ -0.34
MCF2L-231ENST00000494043 TPRNQ4KMQ1 711 aa12.9□□□□□ -0.34
MCF2L-231ENST00000494043 DTHD1Q6ZMT9 781 aa12.9□□□□□ -0.34
MCF2L-231ENST00000494043 GPT2Q8TD30 523 aa12.9□□□□□ -0.34
MCF2L-231ENST00000494043 MRPS27Q92552 414 aaKnown RBP12.9□□□□□ -0.34
MCF2L-231ENST00000494043 ZFP91Q96JP5 570 aaPredicted RBP12.9□□□□□ -0.34
MCF2L-231ENST00000494043 FAM20AQ96MK3 541 aa12.9□□□□□ -0.34
MCF2L-231ENST00000494043 MPHOSPH6Q99547 160 aaKnown RBP12.9□□□□□ -0.34
MCF2L-231ENST00000494043 CSRNP2Q9H175 543 aa12.9□□□□□ -0.34
MCF2L-231ENST00000494043 JADE2Q9NQC1 790 aa12.9□□□□□ -0.34
MCF2L-231ENST00000494043 RNF186Q9NXI6 227 aa12.9□□□□□ -0.34
MCF2L-231ENST00000494043 LRRC37A2A6NM11 1700 aa12.89□□□□□ -0.35
MCF2L-231ENST00000494043 MARCH6O60337 910 aa12.89□□□□□ -0.35
MCF2L-231ENST00000494043 TBC1D8O95759 1140 aa12.89□□□□□ -0.35
MCF2L-231ENST00000494043 CMA1P23946 247 aa12.89□□□□□ -0.35
MCF2L-231ENST00000494043 HOXD11P31277 338 aaPredicted RBP12.89□□□□□ -0.35
MCF2L-231ENST00000494043 LONP1P36776 959 aaKnown RBP12.89□□□□□ -0.35
MCF2L-231ENST00000494043 TXKP42681 527 aa12.89□□□□□ -0.35
MCF2L-231ENST00000494043 FXR2P51116 673 aaKnown RBP eCLIP12.89□□□□□ -0.35
MCF2L-231ENST00000494043 C1QTNF8P60827 252 aa12.89□□□□□ -0.35
MCF2L-231ENST00000494043 PDE4DQ08499 809 aa12.89□□□□□ -0.35
MCF2L-231ENST00000494043 STXBP2Q15833 593 aa12.89□□□□□ -0.35
MCF2L-231ENST00000494043 TMEM266Q2M3C6 531 aa12.89□□□□□ -0.35
MCF2L-231ENST00000494043 MORN1Q5T089 497 aa12.89□□□□□ -0.35
MCF2L-231ENST00000494043 RESP18Q5W5W9 173 aa12.89□□□□□ -0.35
MCF2L-231ENST00000494043 SHC4Q6S5L8 630 aa12.89□□□□□ -0.35
MCF2L-231ENST00000494043 SLFN12Q8IYM2 578 aa12.89□□□□□ -0.35
MCF2L-231ENST00000494043 FSIP1Q8NA03 581 aa12.89□□□□□ -0.35
MCF2L-231ENST00000494043 MORC4Q8TE76 937 aa12.89□□□□□ -0.35
MCF2L-231ENST00000494043 GPRASP2Q96D09 838 aa12.89□□□□□ -0.35
MCF2L-231ENST00000494043 INPP4AQ96PE3 977 aaPredicted RBP12.89□□□□□ -0.35
MCF2L-231ENST00000494043 WDR11Q9BZH6 1224 aa12.89□□□□□ -0.35
MCF2L-231ENST00000494043 GOLPH3LQ9H4A5 285 aa12.89□□□□□ -0.35
MCF2L-231ENST00000494043 DDX49Q9Y6V7 483 aaKnown RBP12.89□□□□□ -0.35
MCF2L-231ENST00000494043 FAM237AA0A1B0GTK4 181 aa12.88□□□□□ -0.35
MCF2L-231ENST00000494043 ASB14A6NK59 587 aa12.88□□□□□ -0.35
MCF2L-231ENST00000494043 TRPA1O75762 1119 aa12.88□□□□□ -0.35
MCF2L-231ENST00000494043 EIF3JO75822 258 aaKnown RBP12.88□□□□□ -0.35
MCF2L-231ENST00000494043 ARP10275 920 aa12.88□□□□□ -0.35
MCF2L-231ENST00000494043 LACTBP83111 547 aaPredicted RBP12.88□□□□□ -0.35
MCF2L-231ENST00000494043 MTMR1Q13613 665 aa12.88□□□□□ -0.35
MCF2L-231ENST00000494043 KLHL40Q2TBA0 621 aa12.88□□□□□ -0.35
MCF2L-231ENST00000494043 SKOR2Q2VWA4 1001 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms