RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 CCDC112Q8NEF3 446 aa11.94□□□□□ -0.5
CLCN6-208ENST00000494028 TRPM4Q8TD43 1214 aa11.94□□□□□ -0.5
CLCN6-208ENST00000494028 CHURC1Q8WUH1 139 aa11.94□□□□□ -0.5
CLCN6-208ENST00000494028 CCDC47Q96A33 483 aaKnown RBP11.94□□□□□ -0.5
CLCN6-208ENST00000494028 KIAA1683Q9H0B3 1180 aa11.94□□□□□ -0.5
CLCN6-208ENST00000494028 KCND1Q9NSA2 647 aa11.94□□□□□ -0.5
CLCN6-208ENST00000494028 R3HCC1Q9Y3T6 440 aaKnown RBP11.94□□□□□ -0.5
CLCN6-208ENST00000494028 ARID2Q68CP9 1835 aa11.93□□□□□ -0.5
CLCN6-208ENST00000494028 ZNF536O15090 1300 aa11.93□□□□□ -0.5
CLCN6-208ENST00000494028 ITIH6Q6UXX5 1313 aa11.93□□□□□ -0.5
CLCN6-208ENST00000494028 IGLV3-22A0A075B6J6 115 aa11.93□□□□□ -0.5
CLCN6-208ENST00000494028 POTEB3A0JP26 581 aa11.93□□□□□ -0.5
CLCN6-208ENST00000494028 USP27XA6NNY8 438 aa11.93□□□□□ -0.5
CLCN6-208ENST00000494028 POTECB2RU33 542 aa11.93□□□□□ -0.5
CLCN6-208ENST00000494028 FAM86B1E9PN63 330 aa11.93□□□□□ -0.5
CLCN6-208ENST00000494028 FAM86B2P0C5J1 330 aa11.93□□□□□ -0.5
CLCN6-208ENST00000494028 CDK11BP21127 795 aaKnown RBP11.93□□□□□ -0.5
CLCN6-208ENST00000494028 CCT6AP40227 531 aaKnown RBP11.93□□□□□ -0.5
CLCN6-208ENST00000494028 STAT3P40763 770 aa11.93□□□□□ -0.5
CLCN6-208ENST00000494028 COPB1P53618 953 aaKnown RBP11.93□□□□□ -0.5
CLCN6-208ENST00000494028 TERF1P54274 439 aa11.93□□□□□ -0.5
CLCN6-208ENST00000494028 AMPD3Q01432 767 aa11.93□□□□□ -0.5
CLCN6-208ENST00000494028 EHHADHQ08426 723 aa11.93□□□□□ -0.5
CLCN6-208ENST00000494028 GOLGA8FQ08AF8 430 aa11.93□□□□□ -0.5
CLCN6-208ENST00000494028 GOLGA8DPQ0D2H9 430 aa11.93□□□□□ -0.5
CLCN6-208ENST00000494028 STIM1Q13586 685 aa11.93□□□□□ -0.5
CLCN6-208ENST00000494028 NR1I3Q14994 352 aa11.93□□□□□ -0.5
CLCN6-208ENST00000494028 TPD52L1Q16890 204 aaPredicted RBP11.93□□□□□ -0.5
CLCN6-208ENST00000494028 PRR16Q569H4 304 aa11.93□□□□□ -0.5
CLCN6-208ENST00000494028 SPECC1LQ69YQ0 1117 aa11.93□□□□□ -0.5
CLCN6-208ENST00000494028 POTEBQ6S5H4 581 aa11.93□□□□□ -0.5
CLCN6-208ENST00000494028 SV2BQ7L1I2 683 aa11.93□□□□□ -0.5
CLCN6-208ENST00000494028 APOBEC3FQ8IUX4 373 aaKnown RBP11.93□□□□□ -0.5
CLCN6-208ENST00000494028 SLFN12Q8IYM2 578 aa11.93□□□□□ -0.5
CLCN6-208ENST00000494028 TRIM47Q96LD4 638 aa11.93□□□□□ -0.5
CLCN6-208ENST00000494028 TAB2Q9NYJ8 693 aa11.93□□□□□ -0.5
CLCN6-208ENST00000494028 CNOT7Q9UIV1 285 aaKnown RBP11.93□□□□□ -0.5
CLCN6-208ENST00000494028 VAV3Q9UKW4 847 aa11.93□□□□□ -0.5
CLCN6-208ENST00000494028 MAPK8IP1Q9UQF2 711 aa11.93□□□□□ -0.5
CLCN6-208ENST00000494028 POLR2AP24928 1970 aaKnown RBP11.92□□□□□ -0.5
CLCN6-208ENST00000494028 RPTORQ8N122 1335 aa11.92□□□□□ -0.5
CLCN6-208ENST00000494028 KCNJ18B7U540 433 aa11.92□□□□□ -0.5
CLCN6-208ENST00000494028 TEX33O43247 280 aa11.92□□□□□ -0.5
CLCN6-208ENST00000494028 MED24O75448 989 aa11.92□□□□□ -0.5
CLCN6-208ENST00000494028 FCER1AP12319 257 aa11.92□□□□□ -0.5
CLCN6-208ENST00000494028 CCNE1P24864 410 aa11.92□□□□□ -0.5
CLCN6-208ENST00000494028 INPP5BP32019 993 aa11.92□□□□□ -0.5
CLCN6-208ENST00000494028 PPP1R2P41236 205 aa11.92□□□□□ -0.5
CLCN6-208ENST00000494028 GHRHRQ02643 423 aa11.92□□□□□ -0.5
CLCN6-208ENST00000494028 DGKZQ13574 1117 aa11.92□□□□□ -0.5
CLCN6-208ENST00000494028 KCNJ12Q14500 433 aa11.92□□□□□ -0.5
CLCN6-208ENST00000494028 NBPF12Q5TAG4 269 aaPredicted RBP11.92□□□□□ -0.5
CLCN6-208ENST00000494028 HAUS3Q68CZ6 603 aa11.92□□□□□ -0.5
CLCN6-208ENST00000494028 LDHDQ86WU2 507 aa11.92□□□□□ -0.5
CLCN6-208ENST00000494028 IRF2BP1Q8IU81 584 aa11.92□□□□□ -0.5
CLCN6-208ENST00000494028 CCAR2Q8N163 923 aaKnown RBP11.92□□□□□ -0.5
CLCN6-208ENST00000494028 LPAR1Q92633 364 aa11.92□□□□□ -0.5
CLCN6-208ENST00000494028 P2RX5Q93086 422 aa11.92□□□□□ -0.5
CLCN6-208ENST00000494028 HPS3Q969F9 1004 aa11.92□□□□□ -0.5
CLCN6-208ENST00000494028 DHTKD1Q96HY7 919 aaPredicted RBP11.92□□□□□ -0.5
CLCN6-208ENST00000494028 C16orf45Q96MC5 204 aaPredicted RBP11.92□□□□□ -0.5
CLCN6-208ENST00000494028 DUSP9Q99956 384 aaKnown RBP11.92□□□□□ -0.5
CLCN6-208ENST00000494028 SLF1Q9BQI6 1058 aa11.92□□□□□ -0.5
CLCN6-208ENST00000494028 WDR18Q9BV38 432 aa11.92□□□□□ -0.5
CLCN6-208ENST00000494028 GTPBP4Q9BZE4 634 aaKnown RBP11.92□□□□□ -0.5
CLCN6-208ENST00000494028 NT5C3AQ9H0P0 336 aa11.92□□□□□ -0.5
CLCN6-208ENST00000494028 DEFB129Q9H1M3 183 aa11.92□□□□□ -0.5
CLCN6-208ENST00000494028 TMX1Q9H3N1 280 aa11.92□□□□□ -0.5
CLCN6-208ENST00000494028 THAP9Q9H5L6 903 aa11.92□□□□□ -0.5
CLCN6-208ENST00000494028 PCDHA12Q9UN75 941 aa11.92□□□□□ -0.5
CLCN6-208ENST00000494028 MRPL11Q9Y3B7 192 aaKnown RBP11.92□□□□□ -0.5
CLCN6-208ENST00000494028 WDR81Q562E7 1941 aa11.92□□□□□ -0.5
CLCN6-208ENST00000494028 FRMPD4Q14CM0 1322 aa11.91□□□□□ -0.5
CLCN6-208ENST00000494028 PVALEFA0A1B0GWK0 134 aa11.91□□□□□ -0.5
CLCN6-208ENST00000494028 POTEFA5A3E0 1075 aa11.91□□□□□ -0.5
CLCN6-208ENST00000494028 GCOM1H8Y6P7 765 aaPredicted RBP11.91□□□□□ -0.5
CLCN6-208ENST00000494028 MSH4O15457 936 aa11.91□□□□□ -0.5
CLCN6-208ENST00000494028 MARCH6O60337 910 aa11.91□□□□□ -0.5
CLCN6-208ENST00000494028 CTNND1O60716 968 aaKnown RBP11.91□□□□□ -0.5
CLCN6-208ENST00000494028 CFBP00751 764 aa11.91□□□□□ -0.5
CLCN6-208ENST00000494028 ICAM1P05362 532 aa11.91□□□□□ -0.5
CLCN6-208ENST00000494028 TPM2P07951 284 aa11.91□□□□□ -0.5
CLCN6-208ENST00000494028 POLR2MP0CAP2 368 aa11.91□□□□□ -0.5
CLCN6-208ENST00000494028 POTEIP0CG38 1075 aa11.91□□□□□ -0.5
CLCN6-208ENST00000494028 VCAM1P19320 739 aa11.91□□□□□ -0.5
CLCN6-208ENST00000494028 STK4Q13043 487 aa11.91□□□□□ -0.5
CLCN6-208ENST00000494028 COASYQ13057 564 aa11.91□□□□□ -0.5
CLCN6-208ENST00000494028 TCP11X2Q5H9J9 407 aa11.91□□□□□ -0.5
CLCN6-208ENST00000494028 DNTTIP2Q5QJE6 756 aaKnown RBP11.91□□□□□ -0.5
CLCN6-208ENST00000494028 ANGEL2Q5VTE6 544 aaKnown RBP11.91□□□□□ -0.5
CLCN6-208ENST00000494028 DCAF15Q66K64 600 aa11.91□□□□□ -0.5
CLCN6-208ENST00000494028 E4F1Q66K89 784 aaPredicted RBP11.91□□□□□ -0.5
CLCN6-208ENST00000494028 NCAPH2Q6IBW4 605 aa11.91□□□□□ -0.5
CLCN6-208ENST00000494028 POTEGQ6S5H5 508 aa11.91□□□□□ -0.5
CLCN6-208ENST00000494028 POTEEQ6S8J3 1075 aa11.91□□□□□ -0.5
CLCN6-208ENST00000494028 FCHSD1Q86WN1 690 aa11.91□□□□□ -0.5
CLCN6-208ENST00000494028 SCYL3Q8IZE3 742 aa11.91□□□□□ -0.5
CLCN6-208ENST00000494028 TC2NQ8N9U0 490 aa11.91□□□□□ -0.5
CLCN6-208ENST00000494028 NOC3LQ8WTT2 800 aaKnown RBP11.91□□□□□ -0.5
CLCN6-208ENST00000494028 TBC1D5Q92609 795 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms