RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.32□□□□□ -0.28
CTSA-209ENST00000493522 COL20A1Q9P218 1284 aa13.32□□□□□ -0.28
CTSA-209ENST00000493522 ZHX1Q9UKY1 873 aaPredicted RBP13.32□□□□□ -0.28
CTSA-209ENST00000493522 PHF24Q9UPV7 400 aa13.32□□□□□ -0.28
CTSA-209ENST00000493522 CNPY2Q9Y2B0 182 aa13.32□□□□□ -0.28
CTSA-209ENST00000493522 DDX49Q9Y6V7 483 aaKnown RBP13.32□□□□□ -0.28
CTSA-209ENST00000493522 STK36Q9NRP7 1315 aa13.32□□□□□ -0.28
CTSA-209ENST00000493522 TRIM43BA6NCK2 446 aa13.31□□□□□ -0.28
CTSA-209ENST00000493522 ASB14A6NK59 587 aa13.31□□□□□ -0.28
CTSA-209ENST00000493522 DTNBO60941 627 aa13.31□□□□□ -0.28
CTSA-209ENST00000493522 DEXIO95424 95 aa13.31□□□□□ -0.28
CTSA-209ENST00000493522 CLTBP09497 229 aa13.31□□□□□ -0.28
CTSA-209ENST00000493522 ADCY7P51828 1080 aa13.31□□□□□ -0.28
CTSA-209ENST00000493522 GHRHRQ02643 423 aa13.31□□□□□ -0.28
CTSA-209ENST00000493522 TLE2Q04725 743 aa13.31□□□□□ -0.28
CTSA-209ENST00000493522 TYW1BQ6NUM6 668 aa13.31□□□□□ -0.28
CTSA-209ENST00000493522 MAMDC4Q6UXC1 1216 aa13.31□□□□□ -0.28
CTSA-209ENST00000493522 SH3RF1Q7Z6J0 888 aa13.31□□□□□ -0.28
CTSA-209ENST00000493522 FCHSD1Q86WN1 690 aa13.31□□□□□ -0.28
CTSA-209ENST00000493522 CCDC83Q8IWF9 413 aa13.31□□□□□ -0.28
CTSA-209ENST00000493522 MAFAQ8NHW3 353 aaPredicted RBP13.31□□□□□ -0.28
CTSA-209ENST00000493522 TRIM43Q96BQ3 446 aaPredicted RBP13.31□□□□□ -0.28
CTSA-209ENST00000493522 ZSCAN31Q96LW9 406 aaPredicted RBP13.31□□□□□ -0.28
CTSA-209ENST00000493522 TAAR1Q96RJ0 339 aa13.31□□□□□ -0.28
CTSA-209ENST00000493522 SEMA6BQ9H3T3 888 aa13.31□□□□□ -0.28
CTSA-209ENST00000493522 SH2B1Q9NRF2 756 aaPredicted RBP13.31□□□□□ -0.28
CTSA-209ENST00000493522 BARHL2Q9NY43 387 aa13.31□□□□□ -0.28
CTSA-209ENST00000493522 B4DLN1 442 aa13.3□□□□□ -0.28
CTSA-209ENST00000493522 AKR1A1P14550 325 aa13.3□□□□□ -0.28
CTSA-209ENST00000493522 EIF2AK2P19525 551 aaKnown RBP13.3□□□□□ -0.28
CTSA-209ENST00000493522 MRPL12P52815 198 aaKnown RBP13.3□□□□□ -0.28
CTSA-209ENST00000493522 PDE4DQ08499 809 aa13.3□□□□□ -0.28
CTSA-209ENST00000493522 ST3GAL1Q11201 340 aa13.3□□□□□ -0.28
CTSA-209ENST00000493522 PKN1Q16512 942 aa13.3□□□□□ -0.28
CTSA-209ENST00000493522 UBE2SQ16763 222 aa13.3□□□□□ -0.28
CTSA-209ENST00000493522 ARHGEF16Q5VV41 709 aa13.3□□□□□ -0.28
CTSA-209ENST00000493522 USP17L6PQ6QN14 398 aa13.3□□□□□ -0.28
CTSA-209ENST00000493522 SAMD3Q8N6K7 520 aa13.3□□□□□ -0.28
CTSA-209ENST00000493522 IL27Q8NEV9 243 aa13.3□□□□□ -0.28
CTSA-209ENST00000493522 CCDC148Q8NFR7 591 aa13.3□□□□□ -0.28
CTSA-209ENST00000493522 DNERQ8NFT8 737 aa13.3□□□□□ -0.28
CTSA-209ENST00000493522 CCDC12Q8WUD4 166 aaPredicted RBP13.3□□□□□ -0.28
CTSA-209ENST00000493522 RNPC3Q96LT9 517 aaKnown RBP13.3□□□□□ -0.28
CTSA-209ENST00000493522 RMDN3Q96TC7 470 aa13.3□□□□□ -0.28
CTSA-209ENST00000493522 PSTPIP2Q9H939 334 aa13.3□□□□□ -0.28
CTSA-209ENST00000493522 MAP3K20Q9NYL2 800 aaKnown RBP13.3□□□□□ -0.28
CTSA-209ENST00000493522 VPS54Q9P1Q0 977 aa13.3□□□□□ -0.28
CTSA-209ENST00000493522 TMEM265A0A087WTH1 108 aa13.29□□□□□ -0.28
CTSA-209ENST00000493522 LOC102724159A0A0B4J2E5 919 aa13.29□□□□□ -0.28
CTSA-209ENST00000493522 A0A1W2PQ45 241 aaPredicted RBP13.29□□□□□ -0.28
CTSA-209ENST00000493522 A0A1W2PQY0 241 aa13.29□□□□□ -0.28
CTSA-209ENST00000493522 PQBP1O60828 265 aaKnown RBP13.29□□□□□ -0.28
CTSA-209ENST00000493522 CD2BP2O95400 341 aaKnown RBP13.29□□□□□ -0.28
CTSA-209ENST00000493522 CTDNEP1O95476 244 aa13.29□□□□□ -0.28
CTSA-209ENST00000493522 SNAI1O95863 264 aaPredicted RBP13.29□□□□□ -0.28
CTSA-209ENST00000493522 PGK1P00558 417 aa13.29□□□□□ -0.28
CTSA-209ENST00000493522 RAG1P15918 1043 aa13.29□□□□□ -0.28
CTSA-209ENST00000493522 PWP2Q15269 919 aaKnown RBP13.29□□□□□ -0.28
CTSA-209ENST00000493522 EEPD1Q7L9B9 569 aa13.29□□□□□ -0.28
CTSA-209ENST00000493522 FBXO16Q8IX29 292 aaPredicted RBP13.29□□□□□ -0.28
CTSA-209ENST00000493522 NSUN7Q8NE18 718 aaKnown RBP13.29□□□□□ -0.28
CTSA-209ENST00000493522 NSUN6Q8TEA1 469 aaKnown RBP13.29□□□□□ -0.28
CTSA-209ENST00000493522 PXMP2Q9NR77 195 aa13.29□□□□□ -0.28
CTSA-209ENST00000493522 ORC3Q9UBD5 711 aaPredicted RBP13.29□□□□□ -0.28
CTSA-209ENST00000493522 SMCO2A6NFE2 343 aa13.28□□□□□ -0.28
CTSA-209ENST00000493522 SPDYE3A6NKU9 549 aa13.28□□□□□ -0.28
CTSA-209ENST00000493522 PIK3CDO00329 1044 aa13.28□□□□□ -0.28
CTSA-209ENST00000493522 KIAA0355O15063 1070 aa13.28□□□□□ -0.28
CTSA-209ENST00000493522 JAK2O60674 1132 aa13.28□□□□□ -0.28
CTSA-209ENST00000493522 FOSL2P15408 326 aa13.28□□□□□ -0.28
CTSA-209ENST00000493522 MCM2P49736 904 aa13.28□□□□□ -0.28
CTSA-209ENST00000493522 MYLIPQ8WY64 445 aa13.28□□□□□ -0.28
CTSA-209ENST00000493522 AIFM3Q96NN9 605 aa13.28□□□□□ -0.28
CTSA-209ENST00000493522 TTYH1Q9H313 450 aaPredicted RBP13.28□□□□□ -0.28
CTSA-209ENST00000493522 ABHD16BQ9H3Z7 469 aa13.28□□□□□ -0.28
CTSA-209ENST00000493522 C6orf50Q9HD87 102 aa13.28□□□□□ -0.28
CTSA-209ENST00000493522 VTA1Q9NP79 307 aa13.28□□□□□ -0.28
CTSA-209ENST00000493522 RIC8AQ9NPQ8 531 aa13.28□□□□□ -0.28
CTSA-209ENST00000493522 ESYT2A0FGR8 921 aa13.27□□□□□ -0.29
CTSA-209ENST00000493522 MEIS2O14770 477 aa13.27□□□□□ -0.29
CTSA-209ENST00000493522 ADAMTS4O75173 837 aa13.27□□□□□ -0.29
CTSA-209ENST00000493522 ZNF865P0CJ78 1059 aaPredicted RBP13.27□□□□□ -0.29
CTSA-209ENST00000493522 MYCLP12524 364 aaPredicted RBP13.27□□□□□ -0.29
CTSA-209ENST00000493522 EDNRBP24530 442 aa13.27□□□□□ -0.29
CTSA-209ENST00000493522 ITGB8P26012 769 aa13.27□□□□□ -0.29
CTSA-209ENST00000493522 CCND2P30279 289 aa13.27□□□□□ -0.29
CTSA-209ENST00000493522 FOSBP53539 338 aa13.27□□□□□ -0.29
CTSA-209ENST00000493522 FPGSQ05932 587 aa13.27□□□□□ -0.29
CTSA-209ENST00000493522 ACVR2BQ13705 512 aa13.27□□□□□ -0.29
CTSA-209ENST00000493522 IL31RAQ8NI17 732 aa13.27□□□□□ -0.29
CTSA-209ENST00000493522 MORC4Q8TE76 937 aa13.27□□□□□ -0.29
CTSA-209ENST00000493522 WASF1Q92558 559 aa13.27□□□□□ -0.29
CTSA-209ENST00000493522 LENG1Q96BZ8 264 aaPredicted RBP13.27□□□□□ -0.29
CTSA-209ENST00000493522 TOX2Q96NM4 488 aa13.27□□□□□ -0.29
CTSA-209ENST00000493522 PDCD2LQ9BRP1 358 aa13.27□□□□□ -0.29
CTSA-209ENST00000493522 TSEN34Q9BSV6 310 aaKnown RBP13.27□□□□□ -0.29
CTSA-209ENST00000493522 GLT8D2Q9H1C3 349 aa13.27□□□□□ -0.29
CTSA-209ENST00000493522 EHMT1Q9H9B1 1298 aa13.27□□□□□ -0.29
CTSA-209ENST00000493522 STARD7Q9NQZ5 370 aa13.27□□□□□ -0.29
CTSA-209ENST00000493522 SH3GLB2Q9NR46 395 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms