RNA–Protein interactions for RNA: ENST00000493467.5

TSC1-207, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best)

Gene TSC1, Length 2,219 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-207ENST00000493467 USP17L20D6RJB6 530 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 LDHBP07195 334 aaKnown RBP10.81□□□□□ -0.68
TSC1-207ENST00000493467 TSPY3P0CV98 308 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 TSPY8P0CW00 308 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 ATP2B4P23634 1241 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 USP14P54578 494 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 HNRNPH2P55795 449 aaKnown RBP10.81□□□□□ -0.68
TSC1-207ENST00000493467 ZBED6P86452 979 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 HDLBPQ00341 1268 aaKnown RBP10.81□□□□□ -0.68
TSC1-207ENST00000493467 CKAP4Q07065 602 aaKnown RBP10.81□□□□□ -0.68
TSC1-207ENST00000493467 USP17L24Q0WX57 530 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 HEATR3Q7Z4Q2 680 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 ZSCAN29Q8IWY8 852 aaPredicted RBP10.81□□□□□ -0.68
TSC1-207ENST00000493467 NOA1Q8NC60 698 aaKnown RBP10.81□□□□□ -0.68
TSC1-207ENST00000493467 NEK11Q8NG66 645 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 DYNLL2Q96FJ2 89 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 TMEM47Q9BQJ4 181 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 TUBGCP2Q9BSJ2 902 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 TRIM9Q9C026 710 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 ACBD3Q9H3P7 528 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 VIPAS39Q9H9C1 493 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 ZCCHC17Q9NP64 241 aaKnown RBP10.81□□□□□ -0.68
TSC1-207ENST00000493467 ADAM21Q9UKJ8 722 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 BAZ2BQ9UIF8 2168 aaKnown RBP10.81□□□□□ -0.68
TSC1-207ENST00000493467 FOCADQ5VW36 1801 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 ABCB11O95342 1321 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 TARSL2A2RTX5 802 aaKnown RBP10.81□□□□□ -0.68
TSC1-207ENST00000493467 KCNQ2O43526 872 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 KRT86O43790 486 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 RPS6KA4O75676 772 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 BAG3O95817 575 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 RHOXF2BP0C7M4 288 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 PLCG1P19174 1290 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 RASA1P20936 1047 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 TM4SF1P30408 202 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 C15orf52Q6ZUT6 534 aaKnown RBP10.81□□□□□ -0.68
TSC1-207ENST00000493467 TXNRD3Q86VQ6 643 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 NBPF5PQ86XG9 351 aaPredicted RBP10.81□□□□□ -0.68
TSC1-207ENST00000493467 CSGALNACT2Q8N6G5 542 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 RBM46Q8TBY0 533 aaKnown RBP10.81□□□□□ -0.68
TSC1-207ENST00000493467 FAM71BQ8TC56 605 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 SH3RF3Q8TEJ3 882 aaPredicted RBP10.81□□□□□ -0.68
TSC1-207ENST00000493467 CNOT6LQ96LI5 555 aaKnown RBP10.81□□□□□ -0.68
TSC1-207ENST00000493467 SETDB2Q96T68 719 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 RHOXF2Q9BQY4 288 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 MKNK2Q9HBH9 465 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 PDE11AQ9HCR9 933 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 GUCA1BQ9UMX6 200 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 LEMD3Q9Y2U8 911 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 ESYT2A0FGR8 921 aa10.8□□□□□ -0.68
TSC1-207ENST00000493467 RASSF10A6NK89 507 aa10.8□□□□□ -0.68
TSC1-207ENST00000493467 B4DLN1 442 aa10.8□□□□□ -0.68
TSC1-207ENST00000493467 TULP2O00295 520 aa10.8□□□□□ -0.68
TSC1-207ENST00000493467 TFRCP02786 760 aaKnown RBP10.8□□□□□ -0.68
TSC1-207ENST00000493467 CASP8Q14790 479 aa10.8□□□□□ -0.68
TSC1-207ENST00000493467 NONOQ15233 471 aaKnown RBP eCLIP10.8□□□□□ -0.68
TSC1-207ENST00000493467 CCDC122Q5T0U0 273 aa10.8□□□□□ -0.68
TSC1-207ENST00000493467 NCAPH2Q6IBW4 605 aa10.8□□□□□ -0.68
TSC1-207ENST00000493467 BICDL1Q6ZP65 573 aa10.8□□□□□ -0.68
TSC1-207ENST00000493467 JAKMIP2Q96AA8 810 aa10.8□□□□□ -0.68
TSC1-207ENST00000493467 ZNF287Q9HBT7 754 aa10.8□□□□□ -0.68
TSC1-207ENST00000493467 ZNHIT6Q9NWK9 470 aaKnown RBP10.8□□□□□ -0.68
TSC1-207ENST00000493467 TRIM10Q9UDY6 481 aa10.8□□□□□ -0.68
TSC1-207ENST00000493467 SAR1BQ9Y6B6 198 aa10.8□□□□□ -0.68
TSC1-207ENST00000493467 BTAF1O14981 1849 aa10.8□□□□□ -0.68
TSC1-207ENST00000493467 hCG_1984214I3L0E3 225 aa10.8□□□□□ -0.68
TSC1-207ENST00000493467 LDHCP07864 332 aa10.8□□□□□ -0.68
TSC1-207ENST00000493467 GNA11P29992 359 aa10.8□□□□□ -0.68
TSC1-207ENST00000493467 HNRNPH3P31942 346 aaKnown RBP10.8□□□□□ -0.68
TSC1-207ENST00000493467 NOVP48745 357 aa10.8□□□□□ -0.68
TSC1-207ENST00000493467 AMPD3Q01432 767 aa10.8□□□□□ -0.68
TSC1-207ENST00000493467 NR6A1Q15406 480 aa10.8□□□□□ -0.68
TSC1-207ENST00000493467 MIIPQ5JXC2 388 aa10.8□□□□□ -0.68
TSC1-207ENST00000493467 FOXR2Q6PJQ5 311 aa10.8□□□□□ -0.68
TSC1-207ENST00000493467 ZNF444Q8N0Y2 327 aaPredicted RBP10.8□□□□□ -0.68
TSC1-207ENST00000493467 ZNF713Q8N859 430 aaPredicted RBP10.8□□□□□ -0.68
TSC1-207ENST00000493467 GOLGA5Q8TBA6 731 aa10.8□□□□□ -0.68
TSC1-207ENST00000493467 CLP1Q92989 425 aaKnown RBP10.8□□□□□ -0.68
TSC1-207ENST00000493467 TSGA10Q9BZW7 698 aa10.8□□□□□ -0.68
TSC1-207ENST00000493467 C6orf50Q9HD87 102 aa10.8□□□□□ -0.68
TSC1-207ENST00000493467 MED4Q9NPJ6 270 aa10.8□□□□□ -0.68
TSC1-207ENST00000493467 TAF1LQ8IZX4 1826 aa10.79□□□□□ -0.68
TSC1-207ENST00000493467 C10orf71Q711Q0 1435 aa10.79□□□□□ -0.68
TSC1-207ENST00000493467 ATP1A1P05023 1023 aaKnown RBP10.79□□□□□ -0.68
TSC1-207ENST00000493467 AARSP49588 968 aaKnown RBP eCLIP10.79□□□□□ -0.681e-7■■■■■ 41.2
TSC1-207ENST00000493467 NAPAP54920 295 aa10.79□□□□□ -0.68
TSC1-207ENST00000493467 TXNRD1Q16881 649 aa10.79□□□□□ -0.68
TSC1-207ENST00000493467 MAP9Q49MG5 647 aa10.79□□□□□ -0.68
TSC1-207ENST00000493467 CNNM4Q6P4Q7 775 aa10.79□□□□□ -0.68
TSC1-207ENST00000493467 TPTE2Q6XPS3 522 aa10.79□□□□□ -0.68
TSC1-207ENST00000493467 C16orf86Q6ZW13 317 aa10.79□□□□□ -0.68
TSC1-207ENST00000493467 NEK8Q86SG6 692 aa10.79□□□□□ -0.68
TSC1-207ENST00000493467 KIAA1328Q86T90 577 aa10.79□□□□□ -0.68
TSC1-207ENST00000493467 NEDD1Q8NHV4 660 aa10.79□□□□□ -0.68
TSC1-207ENST00000493467 PIK3R5Q8WYR1 880 aa10.79□□□□□ -0.68
TSC1-207ENST00000493467 RTFDC1Q9BY42 306 aaPredicted RBP10.79□□□□□ -0.68
TSC1-207ENST00000493467 NHEJ1Q9H9Q4 299 aaPredicted RBP10.79□□□□□ -0.68
TSC1-207ENST00000493467 BMP2KQ9NSY1 1161 aaPredicted RBP10.79□□□□□ -0.68
TSC1-207ENST00000493467 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.79□□□□□ -0.68
TSC1-207ENST00000493467 PLIN4Q96Q06 1357 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms