RNA–Protein interactions for RNA: ENST00000492395.5

ZSWIM8-212, Transcript of zinc finger SWIM-type containing 8, humanhuman

TSL 1 (best)

Gene ZSWIM8, Length 4,490 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM8-212ENST00000492395 TAF12Q16514 161 aa13.65□□□□□ -0.22
ZSWIM8-212ENST00000492395 CDC42EP5Q6NZY7 148 aa13.65□□□□□ -0.22
ZSWIM8-212ENST00000492395 SOWAHDA6NJG2 315 aa13.65□□□□□ -0.22
ZSWIM8-212ENST00000492395 USP17L10C9JJH3 530 aa13.65□□□□□ -0.22
ZSWIM8-212ENST00000492395 POLRMTO00411 1230 aaKnown RBP13.65□□□□□ -0.22
ZSWIM8-212ENST00000492395 HOXA13P31271 388 aaPredicted RBP13.65□□□□□ -0.22
ZSWIM8-212ENST00000492395 PPFIA1Q13136 1202 aa13.65□□□□□ -0.22
ZSWIM8-212ENST00000492395 ARHGAP44Q17R89 818 aa13.65□□□□□ -0.22
ZSWIM8-212ENST00000492395 DCAF15Q66K64 600 aa13.65□□□□□ -0.22
ZSWIM8-212ENST00000492395 SARM1Q6SZW1 724 aa13.65□□□□□ -0.22
ZSWIM8-212ENST00000492395 FMR1NBQ8N0W7 255 aaPredicted RBP13.65□□□□□ -0.22
ZSWIM8-212ENST00000492395 LRRC45Q96CN5 670 aa13.65□□□□□ -0.22
ZSWIM8-212ENST00000492395 LSM14BQ9BX40 385 aaKnown RBP13.65□□□□□ -0.22
ZSWIM8-212ENST00000492395 POLR2MP0CAP2 368 aa13.65□□□□□ -0.22
ZSWIM8-212ENST00000492395 CALRP27797 417 aaKnown RBP13.65□□□□□ -0.22
ZSWIM8-212ENST00000492395 SF3A3Q12874 501 aaKnown RBP eCLIP13.65□□□□□ -0.222e-10■■■■■ 37.1
ZSWIM8-212ENST00000492395 STRIP1Q5VSL9 837 aa13.65□□□□□ -0.22
ZSWIM8-212ENST00000492395 FMNL3Q8IVF7 1028 aa13.65□□□□□ -0.22
ZSWIM8-212ENST00000492395 NAP1L3Q99457 506 aaPredicted RBP13.65□□□□□ -0.22
ZSWIM8-212ENST00000492395 OSBPL5Q9H0X9 879 aaPredicted RBP13.65□□□□□ -0.22
ZSWIM8-212ENST00000492395 ACTN4O43707 911 aaKnown RBP13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 R3HDM1Q15032 1099 aaKnown RBP13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 FAM26FQ5R3K3 315 aa13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 ACRBPQ8NEB7 543 aa13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 FERMT1Q9BQL6 677 aa13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 NUCKS1Q9H1E3 243 aaKnown RBP13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 PDE11AQ9HCR9 933 aa13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 ARMCX3Q9UH62 379 aaPredicted RBP13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 GPR75-ASB3A0A0A6YYF3 556 aa13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 TESPA1A2RU30 521 aaPredicted RBP13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 USP17L15C9J2P7 530 aa13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 USP17L13C9JLJ4 530 aa13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 USP17L11C9JVI0 530 aa13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 USP17L18D6R9N7 530 aa13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 USP17L22D6RA61 530 aa13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 USP17L17D6RBQ6 530 aa13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 USP17L19D6RCP7 530 aa13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 USP17L20D6RJB6 530 aa13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 NOP56O00567 594 aaKnown RBP13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 VIMP08670 466 aaKnown RBP13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 XRCC5P13010 732 aaKnown RBP13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 GUCY2FP51841 1108 aa13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 STAT2P52630 851 aa13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 USP17L24Q0WX57 530 aa13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 USP17L6PQ6QN14 398 aa13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 CNOT6LQ96LI5 555 aaKnown RBP13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 IQCGQ9H095 443 aaKnown RBP13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 POLR2FP61218 127 aaKnown RBP13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 DDX12PQ92771 950 aa13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 DCPSQ96C86 337 aaKnown RBP13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 FNBP1Q96RU3 617 aa13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 TMEM260Q9NX78 707 aa13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 GINS2Q9Y248 185 aa13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 UTP11Q9Y3A2 253 aaKnown RBP13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 PNMA6FA0A0J9YX94 578 aa13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 SORBS3O60504 671 aa13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 ABCB4P21439 1286 aa13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 TTBK2Q6IQ55 1244 aa13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 FBXO38Q6PIJ6 1188 aa13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 PPP1R14CQ8TAE6 165 aa13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 MRPL11Q9Y3B7 192 aaKnown RBP13.64□□□□□ -0.23
ZSWIM8-212ENST00000492395 RGPD5Q99666 1765 aa13.63□□□□□ -0.23
ZSWIM8-212ENST00000492395 ZMYND10O75800 440 aa13.63□□□□□ -0.23
ZSWIM8-212ENST00000492395 TROAPQ12815 778 aa13.63□□□□□ -0.23
ZSWIM8-212ENST00000492395 LONRF2Q1L5Z9 754 aa13.63□□□□□ -0.23
ZSWIM8-212ENST00000492395 SYDE2Q5VT97 1194 aa13.63□□□□□ -0.23
ZSWIM8-212ENST00000492395 SHC4Q6S5L8 630 aa13.63□□□□□ -0.23
ZSWIM8-212ENST00000492395 SAMD15Q9P1V8 674 aa13.63□□□□□ -0.23
ZSWIM8-212ENST00000492395 F5H6K3 240 aa13.63□□□□□ -0.23
ZSWIM8-212ENST00000492395 KLRC3Q07444 240 aa13.63□□□□□ -0.23
ZSWIM8-212ENST00000492395 RESP18Q5W5W9 173 aa13.63□□□□□ -0.23
ZSWIM8-212ENST00000492395 PAGR1Q9BTK6 254 aa13.63□□□□□ -0.23
ZSWIM8-212ENST00000492395 TSKSQ9UJT2 592 aa13.63□□□□□ -0.23
ZSWIM8-212ENST00000492395 KIAA1024Q9UPX6 916 aa13.63□□□□□ -0.23
ZSWIM8-212ENST00000492395 KCNK3O14649 394 aa13.63□□□□□ -0.23
ZSWIM8-212ENST00000492395 TCP1P17987 556 aaKnown RBP13.63□□□□□ -0.23
ZSWIM8-212ENST00000492395 NFIAQ12857 509 aa13.63□□□□□ -0.23
ZSWIM8-212ENST00000492395 B4GALNT4Q76KP1 1039 aa13.63□□□□□ -0.23
ZSWIM8-212ENST00000492395 PLA2G4DQ86XP0 818 aa13.63□□□□□ -0.23
ZSWIM8-212ENST00000492395 SUGT1Q9Y2Z0 365 aa13.63□□□□□ -0.23
ZSWIM8-212ENST00000492395 HYOU1Q9Y4L1 999 aa13.63□□□□□ -0.23
ZSWIM8-212ENST00000492395 RGPD1P0DJD0 1748 aa13.63□□□□□ -0.23
ZSWIM8-212ENST00000492395 DPEP1P16444 411 aa13.62□□□□□ -0.23
ZSWIM8-212ENST00000492395 STAT1P42224 750 aa13.62□□□□□ -0.23
ZSWIM8-212ENST00000492395 CLCN6P51797 869 aa13.62□□□□□ -0.23
ZSWIM8-212ENST00000492395 CACNB1Q02641 598 aaPredicted RBP13.62□□□□□ -0.23
ZSWIM8-212ENST00000492395 ZBTB16Q05516 673 aa13.62□□□□□ -0.23
ZSWIM8-212ENST00000492395 APBB1IPQ7Z5R6 666 aaPredicted RBP13.62□□□□□ -0.23
ZSWIM8-212ENST00000492395 ZNF341Q9BYN7 854 aa13.62□□□□□ -0.23
ZSWIM8-212ENST00000492395 MTMR4Q9NYA4 1195 aa13.62□□□□□ -0.23
ZSWIM8-212ENST00000492395 FOXN1O15353 648 aa13.62□□□□□ -0.23
ZSWIM8-212ENST00000492395 SMTNP53814 917 aa13.62□□□□□ -0.23
ZSWIM8-212ENST00000492395 RUFY4Q6ZNE9 571 aa13.62□□□□□ -0.23
ZSWIM8-212ENST00000492395 U2AF1L4Q8WU68 220 aaKnown RBP13.62□□□□□ -0.23
ZSWIM8-212ENST00000492395 IQCDQ96DY2 449 aa13.62□□□□□ -0.23
ZSWIM8-212ENST00000492395 SPC25Q9HBM1 224 aa13.62□□□□□ -0.23
ZSWIM8-212ENST00000492395 FAM208AQ9UK61 1670 aaKnown RBP13.62□□□□□ -0.23
ZSWIM8-212ENST00000492395 INPP5BP32019 993 aa13.62□□□□□ -0.23
ZSWIM8-212ENST00000492395 ADAM9Q13443 819 aa13.62□□□□□ -0.23
ZSWIM8-212ENST00000492395 KIF22Q14807 665 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms