RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 HAS1Q92839 578 aa17.48■□□□□ 0.39
BRD9-208ENST00000489816 POTEB3A0JP26 581 aa17.48■□□□□ 0.39
BRD9-208ENST00000489816 POTECB2RU33 542 aa17.48■□□□□ 0.39
BRD9-208ENST00000489816 KIF20AO95235 890 aa17.48■□□□□ 0.39
BRD9-208ENST00000489816 NAP1L1P55209 391 aaKnown RBP17.48■□□□□ 0.39
BRD9-208ENST00000489816 PTPROQ16827 1216 aa17.48■□□□□ 0.39
BRD9-208ENST00000489816 POTEBQ6S5H4 581 aa17.48■□□□□ 0.39
BRD9-208ENST00000489816 CCDC102AQ96A19 550 aa17.48■□□□□ 0.39
BRD9-208ENST00000489816 MYH10P35580 1976 aa17.47■□□□□ 0.39
BRD9-208ENST00000489816 FECHP22830 423 aa17.47■□□□□ 0.39
BRD9-208ENST00000489816 BEND6Q5SZJ8 279 aaPredicted RBP17.47■□□□□ 0.39
BRD9-208ENST00000489816 VPS18Q9P253 973 aa17.47■□□□□ 0.39
BRD9-208ENST00000489816 SAR1BQ9Y6B6 198 aa17.47■□□□□ 0.39
BRD9-208ENST00000489816 GAKO14976 1311 aa17.47■□□□□ 0.39
BRD9-208ENST00000489816 A0A1W2PQC6 194 aa17.47■□□□□ 0.39
BRD9-208ENST00000489816 CCDC151A5D8V7 595 aa17.47■□□□□ 0.39
BRD9-208ENST00000489816 AKR1B10O60218 316 aa17.47■□□□□ 0.39
BRD9-208ENST00000489816 TNNT3P45378 269 aaPredicted RBP17.47■□□□□ 0.39
BRD9-208ENST00000489816 GABPAQ06546 454 aa17.47■□□□□ 0.39
BRD9-208ENST00000489816 HAUS4Q9H6D7 363 aa17.47■□□□□ 0.39
BRD9-208ENST00000489816 ARHGAP20Q9P2F6 1191 aa17.47■□□□□ 0.39
BRD9-208ENST00000489816 PDE2AO00408 941 aaPredicted RBP17.46■□□□□ 0.39
BRD9-208ENST00000489816 BUB1O43683 1085 aa17.46■□□□□ 0.39
BRD9-208ENST00000489816 MOCS3O95396 460 aa17.46■□□□□ 0.39
BRD9-208ENST00000489816 EIF4A3P38919 411 aaKnown RBP17.46■□□□□ 0.39
BRD9-208ENST00000489816 FAM193AP78312 1265 aa17.46■□□□□ 0.39
BRD9-208ENST00000489816 AMPD2Q01433 879 aa17.46■□□□□ 0.39
BRD9-208ENST00000489816 TDRD12Q587J7 1177 aaKnown RBP17.46■□□□□ 0.39
BRD9-208ENST00000489816 TTYH3Q9C0H2 523 aa17.46■□□□□ 0.39
BRD9-208ENST00000489816 PCDHA1Q9Y5I3 950 aa17.46■□□□□ 0.39
BRD9-208ENST00000489816 DDTLA6NHG4 134 aaPredicted RBP17.46■□□□□ 0.39
BRD9-208ENST00000489816 LRRC53A6NM62 1247 aa17.46■□□□□ 0.39
BRD9-208ENST00000489816 KRT86O43790 486 aa17.46■□□□□ 0.39
BRD9-208ENST00000489816 CYLC1P35663 651 aaPredicted RBP17.46■□□□□ 0.39
BRD9-208ENST00000489816 VWA3BQ502W6 1294 aa17.46■□□□□ 0.39
BRD9-208ENST00000489816 CERKQ8TCT0 537 aa17.46■□□□□ 0.39
BRD9-208ENST00000489816 CAPN6Q9Y6Q1 641 aa17.46■□□□□ 0.39
BRD9-208ENST00000489816 DDX60LQ5H9U9 1706 aaKnown RBP17.46■□□□□ 0.39
BRD9-208ENST00000489816 PNMA6FA0A0J9YX94 578 aa17.46■□□□□ 0.39
BRD9-208ENST00000489816 NCK2O43639 380 aa17.46■□□□□ 0.39
BRD9-208ENST00000489816 KRT18P05783 430 aaKnown RBP17.46■□□□□ 0.39
BRD9-208ENST00000489816 SLC1A4P43007 532 aa17.46■□□□□ 0.39
BRD9-208ENST00000489816 ZBED6P86452 979 aa17.46■□□□□ 0.39
BRD9-208ENST00000489816 C2orf54Q08AI8 447 aa17.46■□□□□ 0.39
BRD9-208ENST00000489816 SPA17Q15506 151 aa17.46■□□□□ 0.39
BRD9-208ENST00000489816 CACNA2D4Q7Z3S7 1137 aa17.46■□□□□ 0.39
BRD9-208ENST00000489816 RAD54LQ92698 747 aa17.46■□□□□ 0.39
BRD9-208ENST00000489816 EEF2P13639 858 aaKnown RBP17.45■□□□□ 0.38
BRD9-208ENST00000489816 HOXA13P31271 388 aaPredicted RBP17.45■□□□□ 0.38
BRD9-208ENST00000489816 LMAN1P49257 510 aa17.45■□□□□ 0.38
BRD9-208ENST00000489816 RNASE9P60153 205 aaKnown RBP17.45■□□□□ 0.38
BRD9-208ENST00000489816 CYP4A11Q02928 519 aa17.45■□□□□ 0.38
BRD9-208ENST00000489816 GFPT1Q06210 699 aaPredicted RBP17.45■□□□□ 0.38
BRD9-208ENST00000489816 KIF5AQ12840 1032 aa17.45■□□□□ 0.38
BRD9-208ENST00000489816 ASPRV1Q53RT3 343 aa17.45■□□□□ 0.38
BRD9-208ENST00000489816 PROM2Q8N271 834 aa17.45■□□□□ 0.38
BRD9-208ENST00000489816 CUL5Q93034 780 aa17.45■□□□□ 0.38
BRD9-208ENST00000489816 FAM163AQ96GL9 167 aaPredicted RBP17.45■□□□□ 0.38
BRD9-208ENST00000489816 TRIM34Q9BYJ4 488 aa17.45■□□□□ 0.38
BRD9-208ENST00000489816 LTBP4Q8N2S1 1624 aa17.45■□□□□ 0.38
BRD9-208ENST00000489816 POTEFA5A3E0 1075 aa17.45■□□□□ 0.38
BRD9-208ENST00000489816 POTEIP0CG38 1075 aa17.45■□□□□ 0.38
BRD9-208ENST00000489816 SEPT2Q15019 361 aa17.45■□□□□ 0.38
BRD9-208ENST00000489816 QRICH1Q2TAL8 776 aa17.45■□□□□ 0.38
BRD9-208ENST00000489816 CCDC40Q4G0X9 1142 aa17.45■□□□□ 0.38
BRD9-208ENST00000489816 HERC4Q5GLZ8 1057 aaPredicted RBP17.45■□□□□ 0.38
BRD9-208ENST00000489816 CENPPQ6IPU0 288 aa17.45■□□□□ 0.38
BRD9-208ENST00000489816 APOBEC3HQ6NTF7 200 aaKnown RBP17.45■□□□□ 0.38
BRD9-208ENST00000489816 POTEGQ6S5H5 508 aa17.45■□□□□ 0.38
BRD9-208ENST00000489816 POTEEQ6S8J3 1075 aa17.45■□□□□ 0.38
BRD9-208ENST00000489816 UNC13DQ70J99 1090 aa17.45■□□□□ 0.38
BRD9-208ENST00000489816 RIN2Q8WYP3 895 aaPredicted RBP17.45■□□□□ 0.38
BRD9-208ENST00000489816 IFIH1Q9BYX4 1025 aaKnown RBP17.45■□□□□ 0.38
BRD9-208ENST00000489816 DNAJC18Q9H819 358 aa17.45■□□□□ 0.38
BRD9-208ENST00000489816 SBF2Q86WG5 1849 aa17.44■□□□□ 0.38
BRD9-208ENST00000489816 KRT83P78385 493 aa17.44■□□□□ 0.38
BRD9-208ENST00000489816 EZH2Q15910 746 aaKnown RBP17.44■□□□□ 0.38
BRD9-208ENST00000489816 PRR16Q569H4 304 aa17.44■□□□□ 0.38
BRD9-208ENST00000489816 CUEDC2Q9H467 287 aa17.44■□□□□ 0.38
BRD9-208ENST00000489816 PANK4Q9NVE7 773 aa17.44■□□□□ 0.38
BRD9-208ENST00000489816 NAV1Q8NEY1 1877 aa17.44■□□□□ 0.38
BRD9-208ENST00000489816 MYL1P05976 194 aa17.44■□□□□ 0.38
BRD9-208ENST00000489816 C15orf52Q6ZUT6 534 aaKnown RBP17.44■□□□□ 0.38
BRD9-208ENST00000489816 FAM114A1Q8IWE2 563 aa17.44■□□□□ 0.38
BRD9-208ENST00000489816 MYH1P12882 1939 aa17.44■□□□□ 0.38
BRD9-208ENST00000489816 PSMC6P62333 389 aa17.44■□□□□ 0.38
BRD9-208ENST00000489816 WHAMMP3Q1A5X7 153 aa17.44■□□□□ 0.38
BRD9-208ENST00000489816 TRMT1LQ7Z2T5 733 aaKnown RBP17.44■□□□□ 0.38
BRD9-208ENST00000489816 CYP2W1Q8TAV3 490 aa17.44■□□□□ 0.38
BRD9-208ENST00000489816 COG1Q8WTW3 980 aa17.44■□□□□ 0.38
BRD9-208ENST00000489816 TEKT1Q969V4 418 aa17.44■□□□□ 0.38
BRD9-208ENST00000489816 P2RX7Q99572 595 aaKnown RBP17.44■□□□□ 0.38
BRD9-208ENST00000489816 RAB34Q9BZG1 259 aa17.44■□□□□ 0.38
BRD9-208ENST00000489816 LRRIQ3A6PVS8 624 aaPredicted RBP17.43■□□□□ 0.38
BRD9-208ENST00000489816 SFI1A8K8P3 1242 aa17.43■□□□□ 0.38
BRD9-208ENST00000489816 ZBTB5O15062 677 aa17.43■□□□□ 0.38
BRD9-208ENST00000489816 RGL2O15211 777 aa17.43■□□□□ 0.38
BRD9-208ENST00000489816 MRPL12P52815 198 aaKnown RBP17.43■□□□□ 0.38
BRD9-208ENST00000489816 SLC7A5Q01650 507 aa17.43■□□□□ 0.38
BRD9-208ENST00000489816 RASSF7Q02833 373 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms