RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 FDX1P10109 184 aa18.01■□□□□ 0.47
UFD1-209ENST00000489406 COASYQ13057 564 aa18.01■□□□□ 0.47
UFD1-209ENST00000489406 POTEDQ86YR6 584 aa18.01■□□□□ 0.47
UFD1-209ENST00000489406 KCNG4Q8TDN1 519 aa18.01■□□□□ 0.47
UFD1-209ENST00000489406 WNT8BQ93098 351 aa18.01■□□□□ 0.47
UFD1-209ENST00000489406 ATP8A2Q9NTI2 1148 aa18.01■□□□□ 0.47
UFD1-209ENST00000489406 ISY1Q9ULR0 285 aaKnown RBP18.01■□□□□ 0.47
UFD1-209ENST00000489406 MAP1BP46821 2468 aaKnown RBP18■□□□□ 0.47
UFD1-209ENST00000489406 NKRFO15226 690 aaKnown RBP eCLIP18■□□□□ 0.47
UFD1-209ENST00000489406 BMPR1AP36894 532 aa18■□□□□ 0.47
UFD1-209ENST00000489406 ALDH5A1P51649 535 aaPredicted RBP18■□□□□ 0.47
UFD1-209ENST00000489406 TRIM71Q2Q1W2 868 aaKnown RBP18■□□□□ 0.47
UFD1-209ENST00000489406 FIBCD1Q8N539 461 aa18■□□□□ 0.47
UFD1-209ENST00000489406 EAF2Q96CJ1 260 aaPredicted RBP18■□□□□ 0.47
UFD1-209ENST00000489406 ADD3Q9UEY8 706 aaKnown RBP18■□□□□ 0.47
UFD1-209ENST00000489406 RALYQ9UKM9 306 aaKnown RBP18■□□□□ 0.47
UFD1-209ENST00000489406 BARX2Q9UMQ3 279 aaPredicted RBP18■□□□□ 0.47
UFD1-209ENST00000489406 PCDHGC5Q9Y5F6 944 aa18■□□□□ 0.47
UFD1-209ENST00000489406 RALGAPA2Q2PPJ7 1873 aa18■□□□□ 0.47
UFD1-209ENST00000489406 CEP250Q9BV73 2442 aa18■□□□□ 0.47
UFD1-209ENST00000489406 TCRBV5S4A2TA0A5A2 114 aa17.99■□□□□ 0.47
UFD1-209ENST00000489406 TMEM232C9JQI7 657 aa17.99■□□□□ 0.47
UFD1-209ENST00000489406 GNAI2P04899 355 aa17.99■□□□□ 0.47
UFD1-209ENST00000489406 SNAP25P60880 206 aa17.99■□□□□ 0.47
UFD1-209ENST00000489406 PDE4BQ07343 736 aa17.99■□□□□ 0.47
UFD1-209ENST00000489406 PTK7Q13308 1070 aa17.99■□□□□ 0.47
UFD1-209ENST00000489406 HDAC6Q9UBN7 1215 aa17.99■□□□□ 0.47
UFD1-209ENST00000489406 GTF2IRD1Q9UHL9 959 aa17.99■□□□□ 0.47
UFD1-209ENST00000489406 LCTP09848 1927 aa17.99■□□□□ 0.47
UFD1-209ENST00000489406 MBD4O95243 580 aa17.98■□□□□ 0.47
UFD1-209ENST00000489406 BMP3P12645 472 aa17.98■□□□□ 0.47
UFD1-209ENST00000489406 ASTLQ6HA08 431 aaPredicted RBP17.98■□□□□ 0.47
UFD1-209ENST00000489406 ADGRD2Q7Z7M1 963 aa17.98■□□□□ 0.47
UFD1-209ENST00000489406 STK11IPQ8N1F8 1099 aa17.98■□□□□ 0.47
UFD1-209ENST00000489406 EFHBQ8N7U6 833 aa17.98■□□□□ 0.47
UFD1-209ENST00000489406 C7orf31Q8N865 590 aa17.98■□□□□ 0.47
UFD1-209ENST00000489406 KAT2BQ92831 832 aa17.98■□□□□ 0.47
UFD1-209ENST00000489406 IL17RAQ96F46 866 aa17.98■□□□□ 0.47
UFD1-209ENST00000489406 IFIH1Q9BYX4 1025 aaKnown RBP17.98■□□□□ 0.47
UFD1-209ENST00000489406 DLL3Q9NYJ7 618 aa17.98■□□□□ 0.47
UFD1-209ENST00000489406 EMSYQ7Z589 1322 aa17.98■□□□□ 0.47
UFD1-209ENST00000489406 SURF6O75683 361 aaKnown RBP17.97■□□□□ 0.47
UFD1-209ENST00000489406 MMP1P03956 469 aa17.97■□□□□ 0.47
UFD1-209ENST00000489406 TXNP10599 105 aaKnown RBP17.97■□□□□ 0.47
UFD1-209ENST00000489406 IKQ13123 557 aaPredicted RBP17.97■□□□□ 0.47
UFD1-209ENST00000489406 CAMK1Q14012 370 aa17.97■□□□□ 0.47
UFD1-209ENST00000489406 BAATQ14032 418 aaPredicted RBP17.97■□□□□ 0.47
UFD1-209ENST00000489406 PLEKHG4Q58EX7 1191 aa17.97■□□□□ 0.47
UFD1-209ENST00000489406 KREMEN2Q8NCW0 462 aa17.97■□□□□ 0.47
UFD1-209ENST00000489406 SCFD2Q8WU76 684 aa17.97■□□□□ 0.47
UFD1-209ENST00000489406 PPP2R3CQ969Q6 453 aa17.97■□□□□ 0.47
UFD1-209ENST00000489406 CHMP4CQ96CF2 233 aa17.97■□□□□ 0.47
UFD1-209ENST00000489406 MRS2Q9HD23 443 aa17.97■□□□□ 0.47
UFD1-209ENST00000489406 GREB1LQ9C091 1923 aaPredicted RBP17.97■□□□□ 0.47
UFD1-209ENST00000489406 SPTBN2O15020 2390 aa17.97■□□□□ 0.47
UFD1-209ENST00000489406 LINC00271P0C7V0 271 aa17.96■□□□□ 0.47
UFD1-209ENST00000489406 RASA1P20936 1047 aa17.96■□□□□ 0.47
UFD1-209ENST00000489406 STAT2P52630 851 aa17.96■□□□□ 0.47
UFD1-209ENST00000489406 TTF1Q15361 905 aaPredicted RBP17.96■□□□□ 0.47
UFD1-209ENST00000489406 SLFNL1Q499Z3 407 aa17.96■□□□□ 0.47
UFD1-209ENST00000489406 SLFN13Q68D06 897 aa17.96■□□□□ 0.47
UFD1-209ENST00000489406 CTR9Q6PD62 1173 aa17.96■□□□□ 0.47
UFD1-209ENST00000489406 RBM23Q86U06 439 aaKnown RBP17.96■□□□□ 0.47
UFD1-209ENST00000489406 RPAP2Q8IXW5 612 aaPredicted RBP17.96■□□□□ 0.47
UFD1-209ENST00000489406 AFG1LQ8WV93 481 aa17.96■□□□□ 0.47
UFD1-209ENST00000489406 ALG1Q9BT22 464 aa17.96■□□□□ 0.47
UFD1-209ENST00000489406 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.95■□□□□ 0.46
UFD1-209ENST00000489406 RSPH10B2B2RC85 870 aa17.95■□□□□ 0.46
UFD1-209ENST00000489406 GLP2RO95838 553 aa17.95■□□□□ 0.46
UFD1-209ENST00000489406 LMNAP02545 664 aaKnown RBP17.95■□□□□ 0.46
UFD1-209ENST00000489406 MMP3P08254 477 aa17.95■□□□□ 0.46
UFD1-209ENST00000489406 RSPH10BP0C881 870 aa17.95■□□□□ 0.46
UFD1-209ENST00000489406 ATF7P17544 494 aaPredicted RBP17.95■□□□□ 0.46
UFD1-209ENST00000489406 SP100P23497 879 aaPredicted RBP17.95■□□□□ 0.46
UFD1-209ENST00000489406 NRIP1P48552 1158 aa17.95■□□□□ 0.46
UFD1-209ENST00000489406 ZNF200P98182 395 aaPredicted RBP17.95■□□□□ 0.46
UFD1-209ENST00000489406 PDE4DQ08499 809 aa17.95■□□□□ 0.46
UFD1-209ENST00000489406 DDRGK1Q96HY6 314 aa17.95■□□□□ 0.46
UFD1-209ENST00000489406 RWDD3Q9Y3V2 267 aa17.95■□□□□ 0.46
UFD1-209ENST00000489406 ARIH2O95376 493 aa17.94■□□□□ 0.46
UFD1-209ENST00000489406 GMCL1P1Q8NEA9 526 aa17.94■□□□□ 0.46
UFD1-209ENST00000489406 CHURC1Q8WUH1 139 aa17.94■□□□□ 0.46
UFD1-209ENST00000489406 SEPT8Q92599 483 aa17.94■□□□□ 0.46
UFD1-209ENST00000489406 MKL1Q969V6 931 aa17.94■□□□□ 0.46
UFD1-209ENST00000489406 MFSD1Q9H3U5 465 aa17.94■□□□□ 0.46
UFD1-209ENST00000489406 MKNK2Q9HBH9 465 aa17.94■□□□□ 0.46
UFD1-209ENST00000489406 CCPG1Q9ULG6 757 aa17.94■□□□□ 0.46
UFD1-209ENST00000489406 USP24Q9UPU5 2620 aa17.94■□□□□ 0.46
UFD1-209ENST00000489406 MYH4Q9Y623 1939 aa17.94■□□□□ 0.46
UFD1-209ENST00000489406 BRD1O95696 1058 aa17.93■□□□□ 0.46
UFD1-209ENST00000489406 CASTP20810 708 aaKnown RBP17.93■□□□□ 0.46
UFD1-209ENST00000489406 DNAJB1P25685 340 aa17.93■□□□□ 0.46
UFD1-209ENST00000489406 THPOP40225 353 aa17.93■□□□□ 0.46
UFD1-209ENST00000489406 PSEN2P49810 448 aa17.93■□□□□ 0.46
UFD1-209ENST00000489406 POLA2Q14181 598 aa17.93■□□□□ 0.46
UFD1-209ENST00000489406 FAM160B2Q86V87 743 aa17.93■□□□□ 0.46
UFD1-209ENST00000489406 UBALD2Q8IYN6 164 aa17.93■□□□□ 0.46
UFD1-209ENST00000489406 STAG1Q8WVM7 1258 aa17.93■□□□□ 0.46
UFD1-209ENST00000489406 SUSD6Q92537 303 aa17.93■□□□□ 0.46
UFD1-209ENST00000489406 COL26A1Q96A83 441 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms