RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 NFKBIBQ15653 356 aa18.18■□□□□ 0.5
CLDN11-208ENST00000488989 WDR78Q5VTH9 848 aa18.18■□□□□ 0.5
CLDN11-208ENST00000488989 NIPA1Q7RTP0 329 aa18.18■□□□□ 0.5
CLDN11-208ENST00000488989 VSIG10LQ86VR7 867 aa18.18■□□□□ 0.5
CLDN11-208ENST00000488989 CCAR1Q8IX12 1150 aaKnown RBP18.18■□□□□ 0.5
CLDN11-208ENST00000488989 JMYQ8N9B5 988 aa18.18■□□□□ 0.5
CLDN11-208ENST00000488989 MTMR9Q96QG7 549 aa18.18■□□□□ 0.5
CLDN11-208ENST00000488989 TMEM60Q9H2L4 133 aa18.18■□□□□ 0.5
CLDN11-208ENST00000488989 RNF186Q9NXI6 227 aa18.18■□□□□ 0.5
CLDN11-208ENST00000488989 DDX25Q9UHL0 483 aaKnown RBP18.18■□□□□ 0.5
CLDN11-208ENST00000488989 UBIAD1Q9Y5Z9 338 aa18.18■□□□□ 0.5
CLDN11-208ENST00000488989 IVNS1ABPQ9Y6Y0 642 aa18.18■□□□□ 0.5
CLDN11-208ENST00000488989 MEIS1O00470 390 aa18.17■□□□□ 0.5
CLDN11-208ENST00000488989 TBX3O15119 743 aa18.17■□□□□ 0.5
CLDN11-208ENST00000488989 PRPF40AO75400 957 aaKnown RBP18.17■□□□□ 0.5
CLDN11-208ENST00000488989 STAM2O75886 525 aa18.17■□□□□ 0.5
CLDN11-208ENST00000488989 NR3C2P08235 984 aa18.17■□□□□ 0.5
CLDN11-208ENST00000488989 ADORA2AP29274 412 aa18.17■□□□□ 0.5
CLDN11-208ENST00000488989 UBXN2AP68543 259 aa18.17■□□□□ 0.5
CLDN11-208ENST00000488989 ZNF792Q3KQV3 632 aa18.17■□□□□ 0.5
CLDN11-208ENST00000488989 CEP55Q53EZ4 464 aa18.17■□□□□ 0.5
CLDN11-208ENST00000488989 MORN1Q5T089 497 aa18.17■□□□□ 0.5
CLDN11-208ENST00000488989 AXDND1Q5T1B0 1012 aaPredicted RBP18.17■□□□□ 0.5
CLDN11-208ENST00000488989 POTEDQ86YR6 584 aa18.17■□□□□ 0.5
CLDN11-208ENST00000488989 MORC4Q8TE76 937 aa18.17■□□□□ 0.5
CLDN11-208ENST00000488989 MXRA8Q9BRK3 442 aa18.17■□□□□ 0.5
CLDN11-208ENST00000488989 KCNMB3Q9NPA1 279 aa18.17■□□□□ 0.5
CLDN11-208ENST00000488989 FBXO2Q9UK22 296 aaPredicted RBP18.17■□□□□ 0.5
CLDN11-208ENST00000488989 PCDHA7Q9UN72 937 aa18.17■□□□□ 0.5
CLDN11-208ENST00000488989 DIS3Q9Y2L1 958 aaKnown RBP18.17■□□□□ 0.5
CLDN11-208ENST00000488989 SRPRBQ9Y5M8 271 aaKnown RBP18.17■□□□□ 0.5
CLDN11-208ENST00000488989 ZSWIM8A7E2V4 1837 aa18.16■□□□□ 0.5
CLDN11-208ENST00000488989 OR52Z1P0C646 297 aa18.16■□□□□ 0.5
CLDN11-208ENST00000488989 PTMSP20962 102 aa18.16■□□□□ 0.5
CLDN11-208ENST00000488989 MARCKSP29966 332 aaPredicted RBP18.16■□□□□ 0.5
CLDN11-208ENST00000488989 CCND2P30279 289 aa18.16■□□□□ 0.5
CLDN11-208ENST00000488989 ZNF76P36508 570 aa18.16■□□□□ 0.5
CLDN11-208ENST00000488989 ADALQ6DHV7 355 aa18.16■□□□□ 0.5
CLDN11-208ENST00000488989 ZNF467Q7Z7K2 595 aaPredicted RBP18.16■□□□□ 0.5
CLDN11-208ENST00000488989 FERMT2Q96AC1 680 aa18.16■□□□□ 0.5
CLDN11-208ENST00000488989 SAGE1Q9NXZ1 904 aa18.16■□□□□ 0.5
CLDN11-208ENST00000488989 MRVI1Q9Y6F6 885 aa18.16■□□□□ 0.5
CLDN11-208ENST00000488989 CASP8AP2Q9UKL3 1982 aa18.15■□□□□ 0.5
CLDN11-208ENST00000488989 B4DLN1 442 aa18.15■□□□□ 0.5
CLDN11-208ENST00000488989 CUTAO60888 179 aa18.15■□□□□ 0.5
CLDN11-208ENST00000488989 COBLO75128 1261 aa18.15■□□□□ 0.5
CLDN11-208ENST00000488989 PGK2P07205 417 aa18.15■□□□□ 0.5
CLDN11-208ENST00000488989 UBE2HP62256 183 aa18.15■□□□□ 0.5
CLDN11-208ENST00000488989 SETQ01105 290 aaPredicted RBP18.15■□□□□ 0.5
CLDN11-208ENST00000488989 CALCRLQ16602 461 aa18.15■□□□□ 0.5
CLDN11-208ENST00000488989 KRI1Q8N9T8 703 aaKnown RBP18.15■□□□□ 0.5
CLDN11-208ENST00000488989 ZNF579Q8NAF0 562 aaKnown RBP18.15■□□□□ 0.5
CLDN11-208ENST00000488989 CYP2W1Q8TAV3 490 aa18.15■□□□□ 0.5
CLDN11-208ENST00000488989 ETNPPLQ8TBG4 499 aa18.15■□□□□ 0.5
CLDN11-208ENST00000488989 USP6NLQ92738 828 aa18.15■□□□□ 0.5
CLDN11-208ENST00000488989 HAS1Q92839 578 aa18.15■□□□□ 0.5
CLDN11-208ENST00000488989 INPP4AQ96PE3 977 aaPredicted RBP18.15■□□□□ 0.5
CLDN11-208ENST00000488989 JADE2Q9NQC1 790 aa18.15■□□□□ 0.5
CLDN11-208ENST00000488989 A0A1W2PQ27 194 aa18.14■□□□□ 0.49
CLDN11-208ENST00000488989 A0A1W2PQ64 194 aa18.14■□□□□ 0.49
CLDN11-208ENST00000488989 A0A1W2PQD8 194 aa18.14■□□□□ 0.49
CLDN11-208ENST00000488989 GADD45BO75293 160 aaPredicted RBP18.14■□□□□ 0.49
CLDN11-208ENST00000488989 TRPA1O75762 1119 aa18.14■□□□□ 0.49
CLDN11-208ENST00000488989 TBC1D8O95759 1140 aa18.14■□□□□ 0.49
CLDN11-208ENST00000488989 HOXC6P09630 235 aa18.14■□□□□ 0.49
CLDN11-208ENST00000488989 ITGB5P18084 799 aa18.14■□□□□ 0.49
CLDN11-208ENST00000488989 ME1P48163 572 aa18.14■□□□□ 0.49
CLDN11-208ENST00000488989 IL17AQ16552 155 aa18.14■□□□□ 0.49
CLDN11-208ENST00000488989 PRR16Q569H4 304 aa18.14■□□□□ 0.49
CLDN11-208ENST00000488989 PLA2G4DQ86XP0 818 aa18.14■□□□□ 0.49
CLDN11-208ENST00000488989 FAM20AQ96MK3 541 aa18.14■□□□□ 0.49
CLDN11-208ENST00000488989 MPHOSPH6Q99547 160 aaKnown RBP18.14■□□□□ 0.49
CLDN11-208ENST00000488989 MSH4O15457 936 aa18.13■□□□□ 0.49
CLDN11-208ENST00000488989 EIF3JO75822 258 aaKnown RBP18.13■□□□□ 0.49
CLDN11-208ENST00000488989 MYCLP12524 364 aaPredicted RBP18.13■□□□□ 0.49
CLDN11-208ENST00000488989 CTGFP29279 349 aa18.13■□□□□ 0.49
CLDN11-208ENST00000488989 LACTBP83111 547 aaPredicted RBP18.13■□□□□ 0.49
CLDN11-208ENST00000488989 SP3Q02447 781 aa18.13■□□□□ 0.49
CLDN11-208ENST00000488989 MAP2K5Q13163 448 aa18.13■□□□□ 0.49
CLDN11-208ENST00000488989 STXBP2Q15833 593 aa18.13■□□□□ 0.49
CLDN11-208ENST00000488989 SLFN12Q8IYM2 578 aa18.13■□□□□ 0.49
CLDN11-208ENST00000488989 SOCS4Q8WXH5 440 aa18.13■□□□□ 0.49
CLDN11-208ENST00000488989 GPRASP2Q96D09 838 aa18.13■□□□□ 0.49
CLDN11-208ENST00000488989 GJD2Q9UKL4 321 aa18.13■□□□□ 0.49
CLDN11-208ENST00000488989 ASB14A6NK59 587 aa18.12■□□□□ 0.49
CLDN11-208ENST00000488989 MAFGO15525 162 aa18.12■□□□□ 0.49
CLDN11-208ENST00000488989 RGS20O76081 388 aa18.12■□□□□ 0.49
CLDN11-208ENST00000488989 ICAM3P32942 547 aa18.12■□□□□ 0.49
CLDN11-208ENST00000488989 FXR2P51116 673 aaKnown RBP eCLIP18.12■□□□□ 0.49
CLDN11-208ENST00000488989 FCGRTP55899 365 aa18.12■□□□□ 0.49
CLDN11-208ENST00000488989 GRIN1Q05586 938 aa18.12■□□□□ 0.49
CLDN11-208ENST00000488989 MAMDC4Q6UXC1 1216 aa18.12■□□□□ 0.49
CLDN11-208ENST00000488989 DTHD1Q6ZMT9 781 aa18.12■□□□□ 0.49
CLDN11-208ENST00000488989 NLRX1Q86UT6 975 aa18.12■□□□□ 0.49
CLDN11-208ENST00000488989 MSL3Q8N5Y2 521 aaKnown RBP18.12■□□□□ 0.49
CLDN11-208ENST00000488989 SLC5A5Q92911 643 aa18.12■□□□□ 0.49
CLDN11-208ENST00000488989 NUDT12Q9BQG2 462 aa18.12■□□□□ 0.49
CLDN11-208ENST00000488989 SLC5A4Q9NY91 659 aa18.12■□□□□ 0.49
CLDN11-208ENST00000488989 WDR81Q562E7 1941 aa18.11■□□□□ 0.49
CLDN11-208ENST00000488989 FAM237AA0A1B0GTK4 181 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms