RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 RNF10Q8N5U6 811 aaKnown RBP21.59■■□□□ 1.05
HMG20B-213ENST00000488973 TSEN2Q8NCE0 465 aaKnown RBP21.59■■□□□ 1.05
HMG20B-213ENST00000488973 C8orf37Q96NL8 207 aa21.59■■□□□ 1.05
HMG20B-213ENST00000488973 SPATA31A6Q5VVP1 1343 aa21.59■■□□□ 1.05
HMG20B-213ENST00000488973 EPHB6O15197 1021 aa21.59■■□□□ 1.05
HMG20B-213ENST00000488973 ERLIN2O94905 339 aa21.59■■□□□ 1.05
HMG20B-213ENST00000488973 CALRP27797 417 aaKnown RBP21.59■■□□□ 1.05
HMG20B-213ENST00000488973 C8orf74Q6P047 294 aa21.59■■□□□ 1.05
HMG20B-213ENST00000488973 KRT25Q7Z3Z0 450 aa21.59■■□□□ 1.05
HMG20B-213ENST00000488973 EDEM3Q9BZQ6 932 aa21.59■■□□□ 1.05
HMG20B-213ENST00000488973 FAM207AQ9NSI2 230 aaPredicted RBP21.59■■□□□ 1.05
HMG20B-213ENST00000488973 MCM9Q9NXL9 1143 aa21.59■■□□□ 1.05
HMG20B-213ENST00000488973 TTMPQ5BVD1 217 aa21.58■■□□□ 1.05
HMG20B-213ENST00000488973 ZMYND12Q9H0C1 365 aa21.58■■□□□ 1.05
HMG20B-213ENST00000488973 LRRC53A6NM62 1247 aa21.58■■□□□ 1.04
HMG20B-213ENST00000488973 ASTE1Q2TB18 679 aaPredicted RBP21.58■■□□□ 1.04
HMG20B-213ENST00000488973 LZTS2Q9BRK4 669 aa21.58■■□□□ 1.04
HMG20B-213ENST00000488973 TLR10Q9BXR5 811 aa21.58■■□□□ 1.04
HMG20B-213ENST00000488973 EHD4Q9H223 541 aa21.58■■□□□ 1.04
HMG20B-213ENST00000488973 MMRN2Q9H8L6 949 aa21.58■■□□□ 1.04
HMG20B-213ENST00000488973 ATXN2Q99700 1313 aaKnown RBP21.57■■□□□ 1.04
HMG20B-213ENST00000488973 CCNT1O60563 726 aaKnown RBP21.57■■□□□ 1.04
HMG20B-213ENST00000488973 CXCR5P32302 372 aa21.57■■□□□ 1.04
HMG20B-213ENST00000488973 APBA1Q02410 837 aa21.57■■□□□ 1.04
HMG20B-213ENST00000488973 ARHGAP27Q6ZUM4 889 aa21.57■■□□□ 1.04
HMG20B-213ENST00000488973 RRAGAQ7L523 313 aa21.57■■□□□ 1.04
HMG20B-213ENST00000488973 IFT20Q8IY31 132 aa21.57■■□□□ 1.04
HMG20B-213ENST00000488973 BAP1Q92560 729 aa21.57■■□□□ 1.04
HMG20B-213ENST00000488973 ARL8AQ96BM9 186 aa21.57■■□□□ 1.04
HMG20B-213ENST00000488973 CALML4Q96GE6 196 aa21.57■■□□□ 1.04
HMG20B-213ENST00000488973 SGSM3Q96HU1 749 aa21.57■■□□□ 1.04
HMG20B-213ENST00000488973 NOX5Q96PH1 765 aa21.57■■□□□ 1.04
HMG20B-213ENST00000488973 SLC39A2Q9NP94 309 aa21.57■■□□□ 1.04
HMG20B-213ENST00000488973 SSU72P8A0A1W2PR75 194 aa21.57■■□□□ 1.04
HMG20B-213ENST00000488973 PALM3A6NDB9 673 aaPredicted RBP21.57■■□□□ 1.04
HMG20B-213ENST00000488973 IRF6O14896 467 aa21.57■■□□□ 1.04
HMG20B-213ENST00000488973 HOXA7P31268 230 aaPredicted RBP21.57■■□□□ 1.04
HMG20B-213ENST00000488973 NONOQ15233 471 aaKnown RBP eCLIP21.57■■□□□ 1.04
HMG20B-213ENST00000488973 FAM98CQ17RN3 349 aaKnown RBP21.57■■□□□ 1.04
HMG20B-213ENST00000488973 CFAP221Q4G0U5 840 aa21.57■■□□□ 1.04
HMG20B-213ENST00000488973 C12orf60Q5U649 245 aa21.57■■□□□ 1.04
HMG20B-213ENST00000488973 POTEDQ86YR6 584 aa21.57■■□□□ 1.04
HMG20B-213ENST00000488973 MMTAG2Q9BU76 263 aaKnown RBP21.57■■□□□ 1.04
HMG20B-213ENST00000488973 PVALEFA0A1B0GWK0 134 aa21.56■■□□□ 1.04
HMG20B-213ENST00000488973 TULP1O00294 542 aaPredicted RBP21.56■■□□□ 1.04
HMG20B-213ENST00000488973 USP17L8P0C7I0 530 aa21.56■■□□□ 1.04
HMG20B-213ENST00000488973 ORC2Q13416 577 aaPredicted RBP21.56■■□□□ 1.04
HMG20B-213ENST00000488973 LETM2Q2VYF4 491 aa21.56■■□□□ 1.04
HMG20B-213ENST00000488973 KLHDC7AQ5VTJ3 777 aa21.56■■□□□ 1.04
HMG20B-213ENST00000488973 UNC13DQ70J99 1090 aa21.56■■□□□ 1.04
HMG20B-213ENST00000488973 SV2BQ7L1I2 683 aa21.56■■□□□ 1.04
HMG20B-213ENST00000488973 RBM12Q9NTZ6 932 aaKnown RBP21.56■■□□□ 1.04
HMG20B-213ENST00000488973 SALL4Q9UJQ4 1053 aa21.56■■□□□ 1.04
HMG20B-213ENST00000488973 ZNF652Q9Y2D9 606 aa21.56■■□□□ 1.04
HMG20B-213ENST00000488973 GUF1Q8N442 669 aaKnown RBP21.56■■□□□ 1.04
HMG20B-213ENST00000488973 HPS3Q969F9 1004 aa21.56■■□□□ 1.04
HMG20B-213ENST00000488973 ZIM3Q96PE6 472 aa21.56■■□□□ 1.04
HMG20B-213ENST00000488973 PSMB7Q99436 277 aa21.56■■□□□ 1.04
HMG20B-213ENST00000488973 GDF3Q9NR23 364 aa21.56■■□□□ 1.04
HMG20B-213ENST00000488973 SMARCAL1Q9NZC9 954 aa21.56■■□□□ 1.04
HMG20B-213ENST00000488973 ROBO3Q96MS0 1386 aa21.55■■□□□ 1.04
HMG20B-213ENST00000488973 PRDX5P30044 214 aa21.55■■□□□ 1.04
HMG20B-213ENST00000488973 TECP42680 631 aa21.55■■□□□ 1.04
HMG20B-213ENST00000488973 MRPS25P82663 173 aaKnown RBP21.55■■□□□ 1.04
HMG20B-213ENST00000488973 LRRC63Q05C16 580 aa21.55■■□□□ 1.04
HMG20B-213ENST00000488973 PDXDC1Q6P996 788 aa21.55■■□□□ 1.04
HMG20B-213ENST00000488973 FAM43BQ6ZT52 329 aaPredicted RBP21.55■■□□□ 1.04
HMG20B-213ENST00000488973 C3orf67Q6ZVT6 689 aa21.55■■□□□ 1.04
HMG20B-213ENST00000488973 B4GALNT4Q76KP1 1039 aa21.55■■□□□ 1.04
HMG20B-213ENST00000488973 NEK8Q86SG6 692 aa21.55■■□□□ 1.04
HMG20B-213ENST00000488973 EHD2Q9NZN4 543 aa21.55■■□□□ 1.04
HMG20B-213ENST00000488973 RBAK-RBAKDNI3L0D1 243 aa21.55■■□□□ 1.04
HMG20B-213ENST00000488973 KIF3CO14782 793 aa21.55■■□□□ 1.04
HMG20B-213ENST00000488973 NCK2O43639 380 aa21.55■■□□□ 1.04
HMG20B-213ENST00000488973 ITPK1Q13572 414 aa21.55■■□□□ 1.04
HMG20B-213ENST00000488973 ERFEQ4G0M1 354 aa21.55■■□□□ 1.04
HMG20B-213ENST00000488973 LRCH2Q5VUJ6 765 aa21.55■■□□□ 1.04
HMG20B-213ENST00000488973 MTMR8Q96EF0 704 aa21.55■■□□□ 1.04
HMG20B-213ENST00000488973 STK17AQ9UEE5 414 aa21.55■■□□□ 1.04
HMG20B-213ENST00000488973 HIBADHP31937 336 aaKnown RBP21.54■■□□□ 1.04
HMG20B-213ENST00000488973 LIG3P49916 1009 aa21.54■■□□□ 1.04
HMG20B-213ENST00000488973 FOXR2Q6PJQ5 311 aa21.54■■□□□ 1.04
HMG20B-213ENST00000488973 SPATS2Q86XZ4 545 aaKnown RBP21.54■■□□□ 1.04
HMG20B-213ENST00000488973 IQCKQ8N0W5 287 aa21.54■■□□□ 1.04
HMG20B-213ENST00000488973 SPZ1Q9BXG8 430 aa21.54■■□□□ 1.04
HMG20B-213ENST00000488973 ZEB2O60315 1214 aa21.54■■□□□ 1.04
HMG20B-213ENST00000488973 GNA11P29992 359 aa21.54■■□□□ 1.04
HMG20B-213ENST00000488973 NAPAP54920 295 aa21.54■■□□□ 1.04
HMG20B-213ENST00000488973 RASSF7Q02833 373 aa21.54■■□□□ 1.04
HMG20B-213ENST00000488973 EMC10Q5UCC4 262 aa21.54■■□□□ 1.04
HMG20B-213ENST00000488973 MREGQ8N565 214 aa21.54■■□□□ 1.04
HMG20B-213ENST00000488973 MKNK2Q9HBH9 465 aa21.54■■□□□ 1.04
HMG20B-213ENST00000488973 C6orf50Q9HD87 102 aa21.54■■□□□ 1.04
HMG20B-213ENST00000488973 USP17L3A6NCW0 530 aa21.53■■□□□ 1.04
HMG20B-213ENST00000488973 USP17L4A6NCW7 530 aa21.53■■□□□ 1.04
HMG20B-213ENST00000488973 KLRK1P26718 216 aa21.53■■□□□ 1.04
HMG20B-213ENST00000488973 GFPT1Q06210 699 aaPredicted RBP21.53■■□□□ 1.04
HMG20B-213ENST00000488973 PAK2Q13177 524 aa21.53■■□□□ 1.04
HMG20B-213ENST00000488973 HGSNATQ68CP4 663 aa21.53■■□□□ 1.04
HMG20B-213ENST00000488973 USP17L1Q7RTZ2 530 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms