RNA–Protein interactions for RNA: ENST00000488966.1

YIPF3-207, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-207ENST00000488966 CNKSR3Q6P9H4 555 aa12.62□□□□□ -0.39
YIPF3-207ENST00000488966 NSUN6Q8TEA1 469 aaKnown RBP12.62□□□□□ -0.39
YIPF3-207ENST00000488966 SUGCTQ9HAC7 445 aa12.62□□□□□ -0.39
YIPF3-207ENST00000488966 HDAC6Q9UBN7 1215 aa12.62□□□□□ -0.39
YIPF3-207ENST00000488966 GTF2IRD1Q9UHL9 959 aa12.62□□□□□ -0.39
YIPF3-207ENST00000488966 DDX41Q9UJV9 622 aaKnown RBP12.62□□□□□ -0.39
YIPF3-207ENST00000488966 MTUS1Q9ULD2 1270 aa12.62□□□□□ -0.39
YIPF3-207ENST00000488966 REV3LO60673 3130 aa12.62□□□□□ -0.39
YIPF3-207ENST00000488966 ABCB11O95342 1321 aa12.62□□□□□ -0.39
YIPF3-207ENST00000488966 CCDC171Q6TFL3 1326 aa12.62□□□□□ -0.39
YIPF3-207ENST00000488966 NCOR1O75376 2440 aa12.61□□□□□ -0.39
YIPF3-207ENST00000488966 ABHD14A-ACY1A0A1B0GW23 586 aa12.61□□□□□ -0.39
YIPF3-207ENST00000488966 GJB5O95377 273 aa12.61□□□□□ -0.39
YIPF3-207ENST00000488966 PSEN2P49810 448 aa12.61□□□□□ -0.39
YIPF3-207ENST00000488966 STXBP2Q15833 593 aa12.61□□□□□ -0.39
YIPF3-207ENST00000488966 DGKDQ16760 1214 aa12.61□□□□□ -0.39
YIPF3-207ENST00000488966 TMEM31Q5JXX7 168 aa12.61□□□□□ -0.39
YIPF3-207ENST00000488966 TRAF7Q6Q0C0 670 aa12.61□□□□□ -0.39
YIPF3-207ENST00000488966 DGKHQ86XP1 1220 aa12.61□□□□□ -0.39
YIPF3-207ENST00000488966 ADGRF4Q8IZF3 695 aa12.61□□□□□ -0.39
YIPF3-207ENST00000488966 ESR2Q92731 530 aa12.61□□□□□ -0.39
YIPF3-207ENST00000488966 WNT8BQ93098 351 aa12.61□□□□□ -0.39
YIPF3-207ENST00000488966 IWS1Q96ST2 819 aa12.61□□□□□ -0.39
YIPF3-207ENST00000488966 RMDN3Q96TC7 470 aa12.61□□□□□ -0.39
YIPF3-207ENST00000488966 RAD9AQ99638 391 aa12.61□□□□□ -0.39
YIPF3-207ENST00000488966 ALG1Q9BT22 464 aa12.61□□□□□ -0.39
YIPF3-207ENST00000488966 RNF41Q9H4P4 317 aaPredicted RBP12.61□□□□□ -0.39
YIPF3-207ENST00000488966 CD320Q9NPF0 282 aa12.61□□□□□ -0.39
YIPF3-207ENST00000488966 C11orf16Q9NQ32 467 aa12.61□□□□□ -0.39
YIPF3-207ENST00000488966 LMCD1Q9NZU5 365 aa12.61□□□□□ -0.39
YIPF3-207ENST00000488966 ZBTB47Q9UFB7 747 aaPredicted RBP12.61□□□□□ -0.39
YIPF3-207ENST00000488966 TANC1Q9C0D5 1861 aa12.6□□□□□ -0.39
YIPF3-207ENST00000488966 PARNO95453 639 aaKnown RBP12.6□□□□□ -0.39
YIPF3-207ENST00000488966 F2P00734 622 aa12.6□□□□□ -0.39
YIPF3-207ENST00000488966 ZNF286BP0CG31 522 aa12.6□□□□□ -0.39
YIPF3-207ENST00000488966 EIF2AK2P19525 551 aaKnown RBP12.6□□□□□ -0.39
YIPF3-207ENST00000488966 ERVK-21P61565 698 aa12.6□□□□□ -0.39
YIPF3-207ENST00000488966 ZNF200P98182 395 aaPredicted RBP12.6□□□□□ -0.39
YIPF3-207ENST00000488966 MBTPS1Q14703 1052 aa12.6□□□□□ -0.39
YIPF3-207ENST00000488966 MFSD10Q14728 455 aa12.6□□□□□ -0.39
YIPF3-207ENST00000488966 TRIM71Q2Q1W2 868 aaKnown RBP12.6□□□□□ -0.39
YIPF3-207ENST00000488966 QRICH1Q2TAL8 776 aa12.6□□□□□ -0.39
YIPF3-207ENST00000488966 ZNF618Q5T7W0 954 aa12.6□□□□□ -0.39
YIPF3-207ENST00000488966 FAM117BQ6P1L5 589 aa12.6□□□□□ -0.39
YIPF3-207ENST00000488966 C7orf31Q8N865 590 aa12.6□□□□□ -0.39
YIPF3-207ENST00000488966 PNMA1Q8ND90 353 aa12.6□□□□□ -0.39
YIPF3-207ENST00000488966 TET1Q8NFU7 2136 aa12.6□□□□□ -0.39
YIPF3-207ENST00000488966 EMID1Q96A84 441 aaPredicted RBP12.6□□□□□ -0.39
YIPF3-207ENST00000488966 TGS1Q96RS0 853 aaKnown RBP12.6□□□□□ -0.39
YIPF3-207ENST00000488966 MAF1Q9H063 256 aa12.6□□□□□ -0.39
YIPF3-207ENST00000488966 LINC01553A4QN01 128 aa12.59□□□□□ -0.39
YIPF3-207ENST00000488966 FAM86C2PA6NEL3 165 aa12.59□□□□□ -0.39
YIPF3-207ENST00000488966 HAS3O00219 553 aa12.59□□□□□ -0.39
YIPF3-207ENST00000488966 EIF3JO75822 258 aaKnown RBP12.59□□□□□ -0.39
YIPF3-207ENST00000488966 HOXD11P31277 338 aaPredicted RBP12.59□□□□□ -0.39
YIPF3-207ENST00000488966 PTK7Q13308 1070 aa12.59□□□□□ -0.39
YIPF3-207ENST00000488966 LAMC2Q13753 1193 aa12.59□□□□□ -0.39
YIPF3-207ENST00000488966 IKBKEQ14164 716 aa12.59□□□□□ -0.39
YIPF3-207ENST00000488966 HIC1Q14526 733 aa12.59□□□□□ -0.39
YIPF3-207ENST00000488966 KIAA0753Q2KHM9 967 aa12.59□□□□□ -0.39
YIPF3-207ENST00000488966 ARHGEF16Q5VV41 709 aa12.59□□□□□ -0.39
YIPF3-207ENST00000488966 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.59□□□□□ -0.39
YIPF3-207ENST00000488966 TICAM2Q86XR7 235 aa12.59□□□□□ -0.39
YIPF3-207ENST00000488966 MCF2L2Q86YR7 1114 aa12.59□□□□□ -0.39
YIPF3-207ENST00000488966 ANKS1AQ92625 1134 aa12.59□□□□□ -0.39
YIPF3-207ENST00000488966 KATNAL1Q9BW62 490 aa12.59□□□□□ -0.39
YIPF3-207ENST00000488966 VAT1LQ9HCJ6 419 aa12.59□□□□□ -0.39
YIPF3-207ENST00000488966 MRPL11Q9Y3B7 192 aaKnown RBP12.59□□□□□ -0.39
YIPF3-207ENST00000488966 HCN4Q9Y3Q4 1203 aa12.59□□□□□ -0.39
YIPF3-207ENST00000488966 MRVI1Q9Y6F6 885 aa12.59□□□□□ -0.39
YIPF3-207ENST00000488966 BDP1A6H8Y1 2624 aa12.58□□□□□ -0.39
YIPF3-207ENST00000488966 TRIM6-TRIM34B2RNG4 842 aa12.58□□□□□ -0.4
YIPF3-207ENST00000488966 B4E1Z4 1266 aa12.58□□□□□ -0.4
YIPF3-207ENST00000488966 ZNF213O14771 459 aa12.58□□□□□ -0.4
YIPF3-207ENST00000488966 OPLAHO14841 1288 aa12.58□□□□□ -0.4
YIPF3-207ENST00000488966 KDM4AO75164 1064 aa12.58□□□□□ -0.4
YIPF3-207ENST00000488966 NR3C2P08235 984 aa12.58□□□□□ -0.4
YIPF3-207ENST00000488966 ASPRV1Q53RT3 343 aa12.58□□□□□ -0.4
YIPF3-207ENST00000488966 IQCA1Q86XH1 822 aa12.58□□□□□ -0.4
YIPF3-207ENST00000488966 FBXO11Q86XK2 927 aa12.58□□□□□ -0.4
YIPF3-207ENST00000488966 ENAHQ8N8S7 591 aaPredicted RBP12.58□□□□□ -0.4
YIPF3-207ENST00000488966 PPTC7Q8NI37 304 aa12.58□□□□□ -0.4
YIPF3-207ENST00000488966 CRBNQ96SW2 442 aa12.58□□□□□ -0.4
YIPF3-207ENST00000488966 UBE2ZQ9H832 354 aaPredicted RBP12.58□□□□□ -0.4
YIPF3-207ENST00000488966 KAT14Q9H8E8 782 aa12.58□□□□□ -0.4
YIPF3-207ENST00000488966 JMJD4Q9H9V9 463 aa12.58□□□□□ -0.4
YIPF3-207ENST00000488966 PXMP2Q9NR77 195 aa12.58□□□□□ -0.4
YIPF3-207ENST00000488966 ARIH1Q9Y4X5 557 aaPredicted RBP12.58□□□□□ -0.4
YIPF3-207ENST00000488966 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.57□□□□□ -0.4
YIPF3-207ENST00000488966 PI4K2BG5E9Z4 385 aa12.57□□□□□ -0.4
YIPF3-207ENST00000488966 DHX16O60231 1041 aaKnown RBP12.57□□□□□ -0.4
YIPF3-207ENST00000488966 SORBS3O60504 671 aa12.57□□□□□ -0.4
YIPF3-207ENST00000488966 GPR37L1O60883 481 aa12.57□□□□□ -0.4
YIPF3-207ENST00000488966 EFCAB14O75071 495 aa12.57□□□□□ -0.4
YIPF3-207ENST00000488966 LGR5O75473 907 aa12.57□□□□□ -0.4
YIPF3-207ENST00000488966 CFBP00751 764 aa12.57□□□□□ -0.4
YIPF3-207ENST00000488966 PARP1P09874 1014 aaKnown RBP12.57□□□□□ -0.4
YIPF3-207ENST00000488966 HOXD8P13378 290 aaPredicted RBP12.57□□□□□ -0.4
YIPF3-207ENST00000488966 SDSP20132 328 aa12.57□□□□□ -0.4
YIPF3-207ENST00000488966 KCNA5P22460 613 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms