RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 PIK3CDO00329 1044 aa27.24■■□□□ 1.95
RHBDD3-205ENST00000488106 EIF5BO60841 1220 aaKnown RBP27.24■■□□□ 1.95
RHBDD3-205ENST00000488106 PDIA3P30101 505 aaKnown RBP27.24■■□□□ 1.95
RHBDD3-205ENST00000488106 CCT2P78371 535 aaKnown RBP27.24■■□□□ 1.95
RHBDD3-205ENST00000488106 LY6KQ17RY6 165 aa27.24■■□□□ 1.95
RHBDD3-205ENST00000488106 NCOA5Q9HCD5 579 aaKnown RBP27.24■■□□□ 1.95
RHBDD3-205ENST00000488106 MRVI1Q9Y6F6 885 aa27.24■■□□□ 1.95
RHBDD3-205ENST00000488106 ELP1O95163 1332 aa27.23■■□□□ 1.95
RHBDD3-205ENST00000488106 CPT1AP50416 773 aa27.23■■□□□ 1.95
RHBDD3-205ENST00000488106 ANAPC15P60006 121 aa27.23■■□□□ 1.95
RHBDD3-205ENST00000488106 TLE2Q04725 743 aa27.23■■□□□ 1.95
RHBDD3-205ENST00000488106 C1orf53Q5VUE5 145 aa27.23■■□□□ 1.95
RHBDD3-205ENST00000488106 TYW1BQ6NUM6 668 aa27.23■■□□□ 1.95
RHBDD3-205ENST00000488106 CCDC62Q6P9F0 684 aa27.23■■□□□ 1.95
RHBDD3-205ENST00000488106 VSIG10LQ86VR7 867 aa27.23■■□□□ 1.95
RHBDD3-205ENST00000488106 A0A0U1RQG5 324 aaPredicted RBP27.22■■□□□ 1.95
RHBDD3-205ENST00000488106 PPFIA3O75145 1194 aa27.22■■□□□ 1.95
RHBDD3-205ENST00000488106 EVCP57679 992 aa27.22■■□□□ 1.95
RHBDD3-205ENST00000488106 PPP1R18Q6NYC8 613 aa27.22■■□□□ 1.95
RHBDD3-205ENST00000488106 PHKBQ93100 1093 aa27.22■■□□□ 1.95
RHBDD3-205ENST00000488106 PRKAG2Q9UGJ0 569 aa27.22■■□□□ 1.95
RHBDD3-205ENST00000488106 TRIP12Q14669 1992 aaPredicted RBP27.22■■□□□ 1.95
RHBDD3-205ENST00000488106 STXBP3O00186 592 aa27.21■■□□□ 1.95
RHBDD3-205ENST00000488106 RGS20O76081 388 aa27.21■■□□□ 1.95
RHBDD3-205ENST00000488106 MYL3P08590 195 aa27.21■■□□□ 1.95
RHBDD3-205ENST00000488106 STK3Q13188 491 aa27.21■■□□□ 1.95
RHBDD3-205ENST00000488106 PDLIM7Q9NR12 457 aa27.21■■□□□ 1.95
RHBDD3-205ENST00000488106 hCG_1984214I3L0E3 225 aa27.2■■□□□ 1.94
RHBDD3-205ENST00000488106 GH1P01241 217 aa27.2■■□□□ 1.94
RHBDD3-205ENST00000488106 MAGEA10P43363 369 aaPredicted RBP27.2■■□□□ 1.94
RHBDD3-205ENST00000488106 ARHGAP1Q07960 439 aa27.2■■□□□ 1.94
RHBDD3-205ENST00000488106 PFKFB3Q16875 520 aaPredicted RBP27.2■■□□□ 1.94
RHBDD3-205ENST00000488106 BRDTQ58F21 947 aaPredicted RBP27.2■■□□□ 1.94
RHBDD3-205ENST00000488106 ZNF713Q8N859 430 aaPredicted RBP27.2■■□□□ 1.94
RHBDD3-205ENST00000488106 KAT6AQ92794 2004 aa27.2■■□□□ 1.94
RHBDD3-205ENST00000488106 BARHL2Q9NY43 387 aa27.2■■□□□ 1.94
RHBDD3-205ENST00000488106 SORBS3O60504 671 aa27.19■■□□□ 1.94
RHBDD3-205ENST00000488106 CABYRO75952 493 aa27.19■■□□□ 1.94
RHBDD3-205ENST00000488106 SCG2P13521 617 aa27.19■■□□□ 1.94
RHBDD3-205ENST00000488106 ADCY7P51828 1080 aa27.19■■□□□ 1.94
RHBDD3-205ENST00000488106 PSMC6P62333 389 aa27.19■■□□□ 1.94
RHBDD3-205ENST00000488106 MRPS9P82933 396 aaKnown RBP27.19■■□□□ 1.94
RHBDD3-205ENST00000488106 MDM2Q00987 491 aaPredicted RBP27.19■■□□□ 1.94
RHBDD3-205ENST00000488106 C8orf34Q49A92 452 aa27.19■■□□□ 1.94
RHBDD3-205ENST00000488106 SLC26A6Q9BXS9 759 aa27.19■■□□□ 1.94
RHBDD3-205ENST00000488106 POLR3EQ9NVU0 708 aa27.19■■□□□ 1.94
RHBDD3-205ENST00000488106 RBM27Q9P2N5 1060 aaKnown RBP27.19■■□□□ 1.94
RHBDD3-205ENST00000488106 DDX41Q9UJV9 622 aaKnown RBP27.19■■□□□ 1.94
RHBDD3-205ENST00000488106 SPDYE3A6NKU9 549 aa27.18■■□□□ 1.94
RHBDD3-205ENST00000488106 ARVCFO00192 962 aa27.18■■□□□ 1.94
RHBDD3-205ENST00000488106 CLTBP09497 229 aa27.18■■□□□ 1.94
RHBDD3-205ENST00000488106 AKAP17AQ02040 695 aaKnown RBP27.18■■□□□ 1.94
RHBDD3-205ENST00000488106 NTRK3Q16288 839 aa27.18■■□□□ 1.94
RHBDD3-205ENST00000488106 SH3RF1Q7Z6J0 888 aa27.18■■□□□ 1.94
RHBDD3-205ENST00000488106 AFG1LQ8WV93 481 aa27.18■■□□□ 1.94
RHBDD3-205ENST00000488106 RIC8AQ9NPQ8 531 aa27.18■■□□□ 1.94
RHBDD3-205ENST00000488106 RTEL1Q9NZ71 1219 aa27.18■■□□□ 1.94
RHBDD3-205ENST00000488106 LAMA3Q16787 3333 aa27.18■■□□□ 1.94
RHBDD3-205ENST00000488106 MROH7Q68CQ1 1323 aa27.17■■□□□ 1.94
RHBDD3-205ENST00000488106 PRPF3O43395 683 aaKnown RBP27.17■■□□□ 1.94
RHBDD3-205ENST00000488106 PURAQ00577 322 aaKnown RBP27.17■■□□□ 1.94
RHBDD3-205ENST00000488106 GNPTABQ3T906 1256 aa27.17■■□□□ 1.94
RHBDD3-205ENST00000488106 PCNX4Q63HM2 1172 aa27.17■■□□□ 1.94
RHBDD3-205ENST00000488106 ANKRD33Q7Z3H0 272 aa27.17■■□□□ 1.94
RHBDD3-205ENST00000488106 ZNF274Q96GC6 653 aaPredicted RBP27.17■■□□□ 1.94
RHBDD3-205ENST00000488106 SMCO2A6NFE2 343 aa27.16■■□□□ 1.94
RHBDD3-205ENST00000488106 A6NJR5 290 aa27.16■■□□□ 1.94
RHBDD3-205ENST00000488106 DCDC2CA8MYV0 355 aa27.16■■□□□ 1.94
RHBDD3-205ENST00000488106 MMP3P08254 477 aa27.16■■□□□ 1.94
RHBDD3-205ENST00000488106 IFNAR1P17181 557 aa27.16■■□□□ 1.94
RHBDD3-205ENST00000488106 ITGA7Q13683 1181 aa27.16■■□□□ 1.94
RHBDD3-205ENST00000488106 PKN1Q16512 942 aa27.16■■□□□ 1.94
RHBDD3-205ENST00000488106 KCNV1Q6PIU1 500 aa27.16■■□□□ 1.94
RHBDD3-205ENST00000488106 PGBD1Q96JS3 809 aa27.16■■□□□ 1.94
RHBDD3-205ENST00000488106 GDF15Q99988 308 aa27.16■■□□□ 1.94
RHBDD3-205ENST00000488106 RNF26Q9BY78 433 aaPredicted RBP27.16■■□□□ 1.94
RHBDD3-205ENST00000488106 PCDHA6Q9UN73 950 aa27.16■■□□□ 1.94
RHBDD3-205ENST00000488106 PCDHA8Q9Y5H6 950 aa27.16■■□□□ 1.94
RHBDD3-205ENST00000488106 CPLX1O14810 134 aa27.15■■□□□ 1.94
RHBDD3-205ENST00000488106 STAM2O75886 525 aa27.15■■□□□ 1.94
RHBDD3-205ENST00000488106 UBA1P22314 1058 aaKnown RBP27.15■■□□□ 1.94
RHBDD3-205ENST00000488106 CDK7P50613 346 aa27.15■■□□□ 1.94
RHBDD3-205ENST00000488106 HABP4Q5JVS0 413 aaKnown RBP27.15■■□□□ 1.94
RHBDD3-205ENST00000488106 DHX37Q8IY37 1157 aaKnown RBP27.15■■□□□ 1.94
RHBDD3-205ENST00000488106 LBHD1Q9BQE6 289 aaPredicted RBP27.15■■□□□ 1.94
RHBDD3-205ENST00000488106 MTG1Q9BT17 334 aaPredicted RBP27.15■■□□□ 1.94
RHBDD3-205ENST00000488106 PRO3102Q9H379 93 aa27.15■■□□□ 1.94
RHBDD3-205ENST00000488106 GRIN2DO15399 1336 aa27.15■■□□□ 1.94
RHBDD3-205ENST00000488106 WDR81Q562E7 1941 aa27.14■■□□□ 1.94
RHBDD3-205ENST00000488106 TRIM43BA6NCK2 446 aa27.14■■□□□ 1.94
RHBDD3-205ENST00000488106 GGPS1O95749 300 aa27.14■■□□□ 1.94
RHBDD3-205ENST00000488106 AK2P54819 239 aa27.14■■□□□ 1.94
RHBDD3-205ENST00000488106 FAAP100Q0VG06 881 aa27.14■■□□□ 1.94
RHBDD3-205ENST00000488106 TRIM43Q96BQ3 446 aaPredicted RBP27.14■■□□□ 1.94
RHBDD3-205ENST00000488106 TOX2Q96NM4 488 aa27.14■■□□□ 1.94
RHBDD3-205ENST00000488106 INPP4AQ96PE3 977 aaPredicted RBP27.14■■□□□ 1.94
RHBDD3-205ENST00000488106 EHMT1Q9H9B1 1298 aa27.14■■□□□ 1.94
RHBDD3-205ENST00000488106 TMEM39AQ9NV64 488 aa27.14■■□□□ 1.94
RHBDD3-205ENST00000488106 TANC1Q9C0D5 1861 aa27.14■■□□□ 1.94
RHBDD3-205ENST00000488106 SCN5AQ14524 2016 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms