RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 NTRK1P04629 796 aa5.59□□□□□ -1.51
ECHDC1-217ENST00000488087 GRK2P25098 689 aa5.59□□□□□ -1.51
ECHDC1-217ENST00000488087 GRK3P35626 688 aa5.59□□□□□ -1.51
ECHDC1-217ENST00000488087 PAK1Q13153 545 aa5.59□□□□□ -1.51
ECHDC1-217ENST00000488087 RAB3GAP1Q15042 981 aa5.59□□□□□ -1.51
ECHDC1-217ENST00000488087 PLEKHG4Q58EX7 1191 aa5.59□□□□□ -1.51
ECHDC1-217ENST00000488087 MROH9Q5TGP6 573 aa5.59□□□□□ -1.51
ECHDC1-217ENST00000488087 WWC2Q6AWC2 1192 aa5.59□□□□□ -1.51
ECHDC1-217ENST00000488087 ZC3H7AQ8IWR0 971 aaKnown RBP5.59□□□□□ -1.51
ECHDC1-217ENST00000488087 GSTCDQ8NEC7 633 aa5.59□□□□□ -1.51
ECHDC1-217ENST00000488087 PLEKHO2Q8TD55 490 aa5.59□□□□□ -1.51
ECHDC1-217ENST00000488087 LIN37Q96GY3 246 aaPredicted RBP5.59□□□□□ -1.51
ECHDC1-217ENST00000488087 CLUHP3Q96NS8 147 aa5.59□□□□□ -1.51
ECHDC1-217ENST00000488087 KCNJ15Q99712 375 aa5.59□□□□□ -1.51
ECHDC1-217ENST00000488087 KRTAP4-11Q9BYQ6 195 aa5.59□□□□□ -1.51
ECHDC1-217ENST00000488087 TNFRSF12AQ9NP84 129 aa5.59□□□□□ -1.51
ECHDC1-217ENST00000488087 PPARGC1AQ9UBK2 798 aaKnown RBP5.59□□□□□ -1.51
ECHDC1-217ENST00000488087 FBLN5Q9UBX5 448 aa5.59□□□□□ -1.51
ECHDC1-217ENST00000488087 FAM47E-STBD1D6RA91 191 aa5.58□□□□□ -1.52
ECHDC1-217ENST00000488087 DGKIO75912 1065 aa5.58□□□□□ -1.52
ECHDC1-217ENST00000488087 RASGRP1O95267 797 aa5.58□□□□□ -1.52
ECHDC1-217ENST00000488087 DBHP09172 617 aa5.58□□□□□ -1.52
ECHDC1-217ENST00000488087 SRGAP2CP0DJJ0 459 aa5.58□□□□□ -1.52
ECHDC1-217ENST00000488087 CANXP27824 592 aaKnown RBP5.58□□□□□ -1.52
ECHDC1-217ENST00000488087 ERVFRD-1P60508 538 aa5.58□□□□□ -1.52
ECHDC1-217ENST00000488087 PAQR3Q6TCH7 311 aa5.58□□□□□ -1.52
ECHDC1-217ENST00000488087 FGD2Q7Z6J4 655 aa5.58□□□□□ -1.52
ECHDC1-217ENST00000488087 IRF2BP1Q8IU81 584 aa5.58□□□□□ -1.52
ECHDC1-217ENST00000488087 DIRC2Q96SL1 478 aa5.58□□□□□ -1.52
ECHDC1-217ENST00000488087 JAM3Q9BX67 310 aa5.58□□□□□ -1.52
ECHDC1-217ENST00000488087 KRTAP9-8Q9BYQ0 159 aa5.58□□□□□ -1.52
ECHDC1-217ENST00000488087 KRTAP4-5Q9BYR2 181 aa5.58□□□□□ -1.52
ECHDC1-217ENST00000488087 IPPKQ9H8X2 491 aa5.58□□□□□ -1.52
ECHDC1-217ENST00000488087 RXFP1Q9HBX9 757 aa5.58□□□□□ -1.52
ECHDC1-217ENST00000488087 NUDT5Q9UKK9 219 aa5.58□□□□□ -1.52
ECHDC1-217ENST00000488087 PLAAQ9Y263 795 aa5.58□□□□□ -1.52
ECHDC1-217ENST00000488087 X6R8D5 127 aa5.58□□□□□ -1.52
ECHDC1-217ENST00000488087 ZC3H12DA2A288 527 aaKnown RBP5.57□□□□□ -1.52
ECHDC1-217ENST00000488087 ZNF503-AS2A6NEH8 195 aa5.57□□□□□ -1.52
ECHDC1-217ENST00000488087 F8W031 263 aaPredicted RBP5.57□□□□□ -1.52
ECHDC1-217ENST00000488087 IRS4O14654 1257 aaPredicted RBP5.57□□□□□ -1.52
ECHDC1-217ENST00000488087 SRGAP3O43295 1099 aa5.57□□□□□ -1.52
ECHDC1-217ENST00000488087 KCNQ2O43526 872 aa5.57□□□□□ -1.52
ECHDC1-217ENST00000488087 OPA1O60313 960 aa5.57□□□□□ -1.52
ECHDC1-217ENST00000488087 RFPL3O75679 317 aa5.57□□□□□ -1.52
ECHDC1-217ENST00000488087 CYBBP04839 570 aa5.57□□□□□ -1.52
ECHDC1-217ENST00000488087 GLI4P10075 376 aa5.57□□□□□ -1.52
ECHDC1-217ENST00000488087 ST5P78524 1137 aa5.57□□□□□ -1.52
ECHDC1-217ENST00000488087 TMEM62Q0P6H9 643 aa5.57□□□□□ -1.52
ECHDC1-217ENST00000488087 NR1I3Q14994 352 aa5.57□□□□□ -1.52
ECHDC1-217ENST00000488087 KIAA0907Q7Z7F0 614 aaPredicted RBP5.57□□□□□ -1.52
ECHDC1-217ENST00000488087 ZNF605Q86T29 641 aa5.57□□□□□ -1.52
ECHDC1-217ENST00000488087 DCP2Q8IU60 420 aaKnown RBP5.57□□□□□ -1.52
ECHDC1-217ENST00000488087 DHX37Q8IY37 1157 aaKnown RBP5.57□□□□□ -1.52
ECHDC1-217ENST00000488087 NIM1KQ8IY84 436 aa5.57□□□□□ -1.52
ECHDC1-217ENST00000488087 Q8N1Y9 231 aa5.57□□□□□ -1.52
ECHDC1-217ENST00000488087 NETO2Q8NC67 525 aa5.57□□□□□ -1.52
ECHDC1-217ENST00000488087 SCLYQ96I15 445 aa5.57□□□□□ -1.52
ECHDC1-217ENST00000488087 AP5M1Q9H0R1 490 aa5.57□□□□□ -1.52
ECHDC1-217ENST00000488087 EPB41L1Q9H4G0 881 aa5.57□□□□□ -1.52
ECHDC1-217ENST00000488087 TRIM39Q9HCM9 518 aa5.57□□□□□ -1.52
ECHDC1-217ENST00000488087 FAM53CQ9NYF3 392 aa5.57□□□□□ -1.52
ECHDC1-217ENST00000488087 CARMIL2Q6F5E8 1435 aa5.57□□□□□ -1.52
ECHDC1-217ENST00000488087 LOC105371045A0A1W2PR82 267 aa5.56□□□□□ -1.52
ECHDC1-217ENST00000488087 LRRC10BA6NIK2 292 aa5.56□□□□□ -1.52
ECHDC1-217ENST00000488087 ARVCFO00192 962 aa5.56□□□□□ -1.52
ECHDC1-217ENST00000488087 GNAT1P11488 350 aa5.56□□□□□ -1.52
ECHDC1-217ENST00000488087 GYS2P54840 703 aa5.56□□□□□ -1.52
ECHDC1-217ENST00000488087 SPIRE1Q08AE8 756 aa5.56□□□□□ -1.52
ECHDC1-217ENST00000488087 MLANAQ16655 118 aa5.56□□□□□ -1.52
ECHDC1-217ENST00000488087 FAM47CQ5HY64 1035 aa5.56□□□□□ -1.52
ECHDC1-217ENST00000488087 OLFML2BQ68BL8 750 aa5.56□□□□□ -1.52
ECHDC1-217ENST00000488087 RPTNQ6XPR3 784 aa5.56□□□□□ -1.52
ECHDC1-217ENST00000488087 PRR23BQ6ZRT6 265 aa5.56□□□□□ -1.52
ECHDC1-217ENST00000488087 RIOX2Q8IUF8 465 aa5.56□□□□□ -1.52
ECHDC1-217ENST00000488087 NINJ1Q92982 152 aa5.56□□□□□ -1.52
ECHDC1-217ENST00000488087 PEX11GQ96HA9 241 aa5.56□□□□□ -1.52
ECHDC1-217ENST00000488087 NSUN3Q9H649 340 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-217ENST00000488087 DCP1AQ9NPI6 582 aaPredicted RBP5.56□□□□□ -1.52
ECHDC1-217ENST00000488087 CATSPERZQ9NTU4 200 aa5.56□□□□□ -1.52
ECHDC1-217ENST00000488087 MAGEC2Q9UBF1 373 aaPredicted RBP5.56□□□□□ -1.52
ECHDC1-217ENST00000488087 SIT1Q9Y3P8 196 aa5.56□□□□□ -1.52
ECHDC1-217ENST00000488087 TCRBV16S1A1N1A0A5B0 115 aa5.55□□□□□ -1.52
ECHDC1-217ENST00000488087 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.55□□□□□ -1.52
ECHDC1-217ENST00000488087 KRIT1O00522 736 aa5.55□□□□□ -1.52
ECHDC1-217ENST00000488087 ABLIM1O14639 778 aa5.55□□□□□ -1.52
ECHDC1-217ENST00000488087 GSTA4O15217 222 aa5.55□□□□□ -1.52
ECHDC1-217ENST00000488087 DNAJC8O75937 253 aaPredicted RBP5.55□□□□□ -1.52
ECHDC1-217ENST00000488087 ASLP04424 464 aa5.55□□□□□ -1.52
ECHDC1-217ENST00000488087 SDSP20132 328 aa5.55□□□□□ -1.52
ECHDC1-217ENST00000488087 IGFALSP35858 605 aa5.55□□□□□ -1.52
ECHDC1-217ENST00000488087 DNM2P50570 870 aa5.55□□□□□ -1.52
ECHDC1-217ENST00000488087 JAG1P78504 1218 aa5.55□□□□□ -1.52
ECHDC1-217ENST00000488087 CHRNA2Q15822 529 aa5.55□□□□□ -1.52
ECHDC1-217ENST00000488087 DALRD3Q5D0E6 543 aaKnown RBP5.55□□□□□ -1.52
ECHDC1-217ENST00000488087 EGFLAMQ63HQ2 1017 aa5.55□□□□□ -1.52
ECHDC1-217ENST00000488087 STEAP3Q658P3 488 aa5.55□□□□□ -1.52
ECHDC1-217ENST00000488087 CNNM4Q6P4Q7 775 aa5.55□□□□□ -1.52
ECHDC1-217ENST00000488087 ZC3H14Q6PJT7 736 aaKnown RBP5.55□□□□□ -1.52
ECHDC1-217ENST00000488087 PCDH19Q8TAB3 1148 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms