RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 TEPSINQ96N21 525 aa7.86□□□□□ -1.15
SEC22C-215ENST00000487701 LRRCC1Q9C099 1032 aa7.86□□□□□ -1.15
SEC22C-215ENST00000487701 BCL11AQ9H165 835 aa7.86□□□□□ -1.15
SEC22C-215ENST00000487701 GBA2Q9HCG7 927 aaPredicted RBP7.86□□□□□ -1.15
SEC22C-215ENST00000487701 PIH1D3Q9NQM4 214 aaKnown RBP7.86□□□□□ -1.15
SEC22C-215ENST00000487701 DOCK1Q14185 1865 aa7.85□□□□□ -1.15
SEC22C-215ENST00000487701 MROH7-TTC4A0A0A0MT08 1334 aa7.85□□□□□ -1.15
SEC22C-215ENST00000487701 TCP10L2B9ZVM9 353 aa7.85□□□□□ -1.15
SEC22C-215ENST00000487701 BRD1O95696 1058 aa7.85□□□□□ -1.15
SEC22C-215ENST00000487701 NEFLP07196 543 aa7.85□□□□□ -1.15
SEC22C-215ENST00000487701 GLB1P16278 677 aa7.85□□□□□ -1.15
SEC22C-215ENST00000487701 IRX6P78412 446 aaPredicted RBP7.85□□□□□ -1.15
SEC22C-215ENST00000487701 NFIAQ12857 509 aa7.85□□□□□ -1.15
SEC22C-215ENST00000487701 RASA3Q14644 834 aa7.85□□□□□ -1.15
SEC22C-215ENST00000487701 NBPF12Q5TAG4 269 aaPredicted RBP7.85□□□□□ -1.15
SEC22C-215ENST00000487701 CYP4F22Q6NT55 531 aa7.85□□□□□ -1.15
SEC22C-215ENST00000487701 CDC42EP5Q6NZY7 148 aa7.85□□□□□ -1.15
SEC22C-215ENST00000487701 DZIP1Q86YF9 867 aaKnown RBP7.85□□□□□ -1.15
SEC22C-215ENST00000487701 JMYQ8N9B5 988 aa7.85□□□□□ -1.15
SEC22C-215ENST00000487701 NSUN4Q96CB9 384 aaKnown RBP7.85□□□□□ -1.15
SEC22C-215ENST00000487701 TMEM39BQ9GZU3 492 aa7.85□□□□□ -1.15
SEC22C-215ENST00000487701 ANTXR1Q9H6X2 564 aa7.85□□□□□ -1.15
SEC22C-215ENST00000487701 FZD1Q9UP38 647 aa7.85□□□□□ -1.15
SEC22C-215ENST00000487701 RPAP1Q9BWH6 1393 aaPredicted RBP7.84□□□□□ -1.15
SEC22C-215ENST00000487701 CASP8AP2Q9UKL3 1982 aa7.84□□□□□ -1.15
SEC22C-215ENST00000487701 WISP1O95388 367 aa7.84□□□□□ -1.15
SEC22C-215ENST00000487701 IFIT2P09913 472 aaKnown RBP7.84□□□□□ -1.15
SEC22C-215ENST00000487701 HUNKP57058 714 aa7.84□□□□□ -1.15
SEC22C-215ENST00000487701 RHBDL3P58872 404 aa7.84□□□□□ -1.15
SEC22C-215ENST00000487701 ORC1Q13415 861 aa7.84□□□□□ -1.15
SEC22C-215ENST00000487701 HDAC1Q13547 482 aaPredicted RBP7.84□□□□□ -1.15
SEC22C-215ENST00000487701 DEFB115Q30KQ5 88 aa7.84□□□□□ -1.15
SEC22C-215ENST00000487701 PEAR1Q5VY43 1037 aaPredicted RBP7.84□□□□□ -1.15
SEC22C-215ENST00000487701 SPTY2D1Q68D10 685 aaPredicted RBP7.84□□□□□ -1.15
SEC22C-215ENST00000487701 ADGRA1Q86SQ6 560 aa7.84□□□□□ -1.15
SEC22C-215ENST00000487701 TMEM130Q8N3G9 435 aa7.84□□□□□ -1.15
SEC22C-215ENST00000487701 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.84□□□□□ -1.15
SEC22C-215ENST00000487701 BSNDQ8WZ55 320 aa7.84□□□□□ -1.15
SEC22C-215ENST00000487701 NXPE3Q969Y0 559 aa7.84□□□□□ -1.15
SEC22C-215ENST00000487701 EDC3Q96F86 508 aaKnown RBP7.84□□□□□ -1.15
SEC22C-215ENST00000487701 KLHDC7BQ96G42 594 aa7.84□□□□□ -1.15
SEC22C-215ENST00000487701 HHIPL1Q96JK4 782 aa7.84□□□□□ -1.15
SEC22C-215ENST00000487701 CAPNS2Q96L46 248 aa7.84□□□□□ -1.15
SEC22C-215ENST00000487701 SSBP4Q9BWG4 385 aaPredicted RBP7.84□□□□□ -1.15
SEC22C-215ENST00000487701 KCNK4Q9NYG8 393 aa7.84□□□□□ -1.15
SEC22C-215ENST00000487701 RAI14Q9P0K7 980 aa7.84□□□□□ -1.15
SEC22C-215ENST00000487701 SOX13Q9UN79 622 aa7.84□□□□□ -1.15
SEC22C-215ENST00000487701 PPP2R3BQ9Y5P8 575 aa7.84□□□□□ -1.15
SEC22C-215ENST00000487701 WDR33Q9C0J8 1336 aaKnown RBP7.83□□□□□ -1.16
SEC22C-215ENST00000487701 GPR75-ASB3A0A0A6YYF3 556 aa7.83□□□□□ -1.16
SEC22C-215ENST00000487701 SOWAHDA6NJG2 315 aa7.83□□□□□ -1.16
SEC22C-215ENST00000487701 FAM155AB1AL88 458 aaPredicted RBP7.83□□□□□ -1.16
SEC22C-215ENST00000487701 UBE2Q2LH0YL09 131 aa7.83□□□□□ -1.16
SEC22C-215ENST00000487701 DDX3YO15523 660 aaKnown RBP7.83□□□□□ -1.16
SEC22C-215ENST00000487701 AOC2O75106 756 aa7.83□□□□□ -1.16
SEC22C-215ENST00000487701 WDHD1O75717 1129 aaPredicted RBP7.83□□□□□ -1.16
SEC22C-215ENST00000487701 H2AFB1P0C5Y9 115 aa7.83□□□□□ -1.16
SEC22C-215ENST00000487701 H2AFB2P0C5Z0 115 aa7.83□□□□□ -1.16
SEC22C-215ENST00000487701 ATP5JP18859 108 aa7.83□□□□□ -1.16
SEC22C-215ENST00000487701 BTDP43251 543 aa7.83□□□□□ -1.16
SEC22C-215ENST00000487701 ARL4DP49703 201 aa7.83□□□□□ -1.16
SEC22C-215ENST00000487701 NLRP12P59046 1061 aa7.83□□□□□ -1.16
SEC22C-215ENST00000487701 FKBP1BP68106 108 aa7.83□□□□□ -1.16
SEC22C-215ENST00000487701 TNFAIP1Q13829 316 aa7.83□□□□□ -1.16
SEC22C-215ENST00000487701 PRKG1Q13976 671 aa7.83□□□□□ -1.16
SEC22C-215ENST00000487701 IKBKEQ14164 716 aa7.83□□□□□ -1.16
SEC22C-215ENST00000487701 DUOXA2Q1HG44 320 aa7.83□□□□□ -1.16
SEC22C-215ENST00000487701 FKBP1CQ5VVH2 108 aa7.83□□□□□ -1.16
SEC22C-215ENST00000487701 TSHZ3Q63HK5 1081 aa7.83□□□□□ -1.16
SEC22C-215ENST00000487701 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.83□□□□□ -1.16
SEC22C-215ENST00000487701 ZFPM1Q8IX07 1006 aa7.83□□□□□ -1.16
SEC22C-215ENST00000487701 C2orf69Q8N8R5 385 aa7.83□□□□□ -1.16
SEC22C-215ENST00000487701 OTUD7AQ8TE49 926 aaPredicted RBP7.83□□□□□ -1.16
SEC22C-215ENST00000487701 WNT8BQ93098 351 aa7.83□□□□□ -1.16
SEC22C-215ENST00000487701 DDX4Q9NQI0 724 aaKnown RBP7.83□□□□□ -1.16
SEC22C-215ENST00000487701 USP40Q9NVE5 1235 aa7.83□□□□□ -1.16
SEC22C-215ENST00000487701 TMOD2Q9NZR1 351 aa7.83□□□□□ -1.16
SEC22C-215ENST00000487701 LRP2BPQ9P2M1 347 aa7.83□□□□□ -1.16
SEC22C-215ENST00000487701 ATRNL1Q5VV63 1379 aa7.83□□□□□ -1.16
SEC22C-215ENST00000487701 SALL3Q9BXA9 1300 aa7.82□□□□□ -1.16
SEC22C-215ENST00000487701 METTL12A8MUP2 240 aa7.82□□□□□ -1.16
SEC22C-215ENST00000487701 IDH1O75874 414 aaKnown RBP7.82□□□□□ -1.16
SEC22C-215ENST00000487701 IGHDP01880 384 aa7.82□□□□□ -1.16
SEC22C-215ENST00000487701 GSTO1P78417 241 aa7.82□□□□□ -1.16
SEC22C-215ENST00000487701 TCP10Q12799 353 aa7.82□□□□□ -1.16
SEC22C-215ENST00000487701 GRM1Q13255 1194 aa7.82□□□□□ -1.16
SEC22C-215ENST00000487701 NAA16Q6N069 864 aaPredicted RBP7.82□□□□□ -1.16
SEC22C-215ENST00000487701 RGMBQ6NW40 437 aa7.82□□□□□ -1.16
SEC22C-215ENST00000487701 FAM83AQ86UY5 434 aa7.82□□□□□ -1.16
SEC22C-215ENST00000487701 RASAL3Q86YV0 1011 aa7.82□□□□□ -1.16
SEC22C-215ENST00000487701 UBASH3BQ8TF42 649 aa7.82□□□□□ -1.16
SEC22C-215ENST00000487701 FOXD4L4Q8WXT5 416 aaPredicted RBP7.82□□□□□ -1.16
SEC22C-215ENST00000487701 CLMNQ96JQ2 1002 aa7.82□□□□□ -1.16
SEC22C-215ENST00000487701 CITED4Q96RK1 184 aa7.82□□□□□ -1.16
SEC22C-215ENST00000487701 FAM129BQ96TA1 746 aa7.82□□□□□ -1.16
SEC22C-215ENST00000487701 DNAJC2Q99543 621 aaKnown RBP7.82□□□□□ -1.16
SEC22C-215ENST00000487701 HAUS7Q99871 368 aa7.82□□□□□ -1.16
SEC22C-215ENST00000487701 IDI2Q9BXS1 227 aa7.82□□□□□ -1.16
SEC22C-215ENST00000487701 BHLHE41Q9C0J9 482 aaPredicted RBP7.82□□□□□ -1.16
SEC22C-215ENST00000487701 BOLA2Q9H3K6 86 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms