RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 LBX2Q6XYB7 198 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 GADL1Q6ZQY3 521 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 RNF207Q6ZRF8 634 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 NIPA1Q7RTP0 329 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 KCTD17Q8N5Z5 321 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 MLKLQ8NB16 471 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 CHST13Q8NET6 341 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 SPATA20Q8TB22 786 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 ETNPPLQ8TBG4 499 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 SYTL5Q8TDW5 730 aaPredicted RBP6.93□□□□□ -1.3
VAMP3-203ENST00000487194 SNX29Q8TEQ0 813 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 GTF3C2Q8WUA4 911 aaPredicted RBP6.93□□□□□ -1.3
VAMP3-203ENST00000487194 TBC1D5Q92609 795 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 CCDC47Q96A33 483 aaKnown RBP6.93□□□□□ -1.3
VAMP3-203ENST00000487194 OPTNQ96CV9 577 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 CLMNQ96JQ2 1002 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 NT5C3AQ9H0P0 336 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 ACAD9Q9H845 621 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 RRAGCQ9HB90 399 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 CBX8Q9HC52 389 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 RNF146Q9NTX7 359 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 RMND1Q9NWS8 449 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 STK17AQ9UEE5 414 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 FBXO40Q9UH90 709 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 ZNF214Q9UL59 606 aaPredicted RBP6.93□□□□□ -1.3
VAMP3-203ENST00000487194 AGTPBP1Q9UPW5 1226 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 RPTORQ8N122 1335 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 OTOFQ9HC10 1997 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 IGLV3-22A0A075B6J6 115 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.92□□□□□ -1.3
VAMP3-203ENST00000487194 PP2D1A8MPX8 630 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 FAM86B1E9PN63 330 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 MEIS1O00470 390 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 BIN1O00499 593 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 FOXN1O15353 648 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 FAM86B2P0C5J1 330 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 BCRP11274 1271 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 CDC25AP30304 524 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 AFMP43652 599 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 RPS6P62753 249 aaKnown RBP6.92□□□□□ -1.3
VAMP3-203ENST00000487194 DPYDQ12882 1025 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 MORC3Q14149 939 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 MUM1L1Q5H9M0 696 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 HYIQ5T013 277 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 TREML2Q5T2D2 321 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 PCNX4Q63HM2 1172 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 MAP1SQ66K74 1059 aaPredicted RBP6.92□□□□□ -1.3
VAMP3-203ENST00000487194 NSMFQ6X4W1 530 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 MOB2Q70IA6 237 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 PLA2G4DQ86XP0 818 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 C2orf69Q8N8R5 385 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 CNKSR2Q8WXI2 1034 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 ERCC4Q92889 916 aaPredicted RBP6.92□□□□□ -1.3
VAMP3-203ENST00000487194 LENG9Q96B70 501 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 PPP1R9BQ96SB3 815 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 MXRA8Q9BRK3 442 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 MMTAG2Q9BU76 263 aaKnown RBP6.92□□□□□ -1.3
VAMP3-203ENST00000487194 WDR11Q9BZH6 1224 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 ZNF408Q9H9D4 720 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 HOMER2Q9NSB8 354 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 KBTBD4Q9NVX7 518 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.92□□□□□ -1.3
VAMP3-203ENST00000487194 MAN1B1Q9UKM7 699 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 PNMA3Q9UL41 463 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 FRMPD4Q14CM0 1322 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 LOC285556D6RIA3 1793 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 PARP14Q460N5 1801 aa6.92□□□□□ -1.3
VAMP3-203ENST00000487194 PTPRFP10586 1907 aa6.91□□□□□ -1.3
VAMP3-203ENST00000487194 SMCHD1A6NHR9 2005 aa6.91□□□□□ -1.3
VAMP3-203ENST00000487194 POTEMA6NI47 508 aa6.91□□□□□ -1.3
VAMP3-203ENST00000487194 TRAF5O00463 557 aa6.91□□□□□ -1.3
VAMP3-203ENST00000487194 IKBKBO14920 756 aa6.91□□□□□ -1.3
VAMP3-203ENST00000487194 MSH4O15457 936 aa6.91□□□□□ -1.3
VAMP3-203ENST00000487194 MAFGO15525 162 aa6.91□□□□□ -1.3
VAMP3-203ENST00000487194 STAM2O75886 525 aa6.91□□□□□ -1.3
VAMP3-203ENST00000487194 SLC25A27O95847 323 aa6.91□□□□□ -1.3
VAMP3-203ENST00000487194 PRR29P0C7W0 189 aa6.91□□□□□ -1.3
VAMP3-203ENST00000487194 POTEIP0CG38 1075 aa6.91□□□□□ -1.3
VAMP3-203ENST00000487194 POTEJP0CG39 1038 aa6.91□□□□□ -1.3
VAMP3-203ENST00000487194 CETPP11597 493 aa6.91□□□□□ -1.3
VAMP3-203ENST00000487194 PLCG1P19174 1290 aa6.91□□□□□ -1.3
VAMP3-203ENST00000487194 MUTP22033 750 aa6.91□□□□□ -1.3
VAMP3-203ENST00000487194 CCND2P30279 289 aa6.91□□□□□ -1.3
VAMP3-203ENST00000487194 CCT6AP40227 531 aaKnown RBP6.91□□□□□ -1.3
VAMP3-203ENST00000487194 GTF2A2P52657 109 aa6.91□□□□□ -1.3
VAMP3-203ENST00000487194 GRB10Q13322 594 aa6.91□□□□□ -1.3
VAMP3-203ENST00000487194 BAATQ14032 418 aaPredicted RBP6.91□□□□□ -1.3
VAMP3-203ENST00000487194 PLS1Q14651 629 aa6.91□□□□□ -1.3
VAMP3-203ENST00000487194 KCNB1Q14721 858 aa6.91□□□□□ -1.3
VAMP3-203ENST00000487194 IQCB1Q15051 598 aa6.91□□□□□ -1.3
VAMP3-203ENST00000487194 DPCR1Q3MIW9 517 aa6.91□□□□□ -1.3
VAMP3-203ENST00000487194 TMEM119Q4V9L6 283 aa6.91□□□□□ -1.3
VAMP3-203ENST00000487194 NAALADL2Q58DX5 795 aa6.91□□□□□ -1.3
VAMP3-203ENST00000487194 ARHGEF16Q5VV41 709 aa6.91□□□□□ -1.3
VAMP3-203ENST00000487194 C11orf57Q6ZUT1 292 aaPredicted RBP6.91□□□□□ -1.3
VAMP3-203ENST00000487194 SV2BQ7L1I2 683 aa6.91□□□□□ -1.3
VAMP3-203ENST00000487194 LUZP1Q86V48 1076 aa6.91□□□□□ -1.3
VAMP3-203ENST00000487194 RIOX2Q8IUF8 465 aa6.91□□□□□ -1.3
VAMP3-203ENST00000487194 GRAMD1CQ8IYS0 662 aa6.91□□□□□ -1.3
VAMP3-203ENST00000487194 NSUN6Q8TEA1 469 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms