RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 ABCA3Q99758 1704 aa12.77□□□□□ -0.37
SEC61A1-205ENST00000483956 DIAPH2O60879 1101 aa12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 RPN1P04843 607 aaKnown RBP12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 FGRP09769 529 aa12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 CYP19A1P11511 503 aaPredicted RBP12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 EEF1GP26641 437 aaKnown RBP12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 BYSLQ13895 437 aaKnown RBP12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 CCDC122Q5T0U0 273 aa12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 ARL6IP4Q66PJ3 421 aaKnown RBP12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 EMBQ6PCB8 327 aa12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 IRF2BP1Q8IU81 584 aa12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 MFN1Q8IWA4 741 aa12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 ZNF34Q8IZ26 560 aa12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 MIGA1Q8NAN2 632 aa12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 SEC16BQ96JE7 1060 aa12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 FAM167BQ9BTA0 163 aa12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 TSGA10Q9BZW7 698 aa12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 CAPN11Q9UMQ6 739 aa12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 LTBP4Q8N2S1 1624 aa12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 PDS5AQ29RF7 1337 aaKnown RBP12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 CNTNAP5Q8WYK1 1306 aa12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 TTC26A0AVF1 554 aa12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 PPFIA2O75334 1257 aa12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 DNAJC8O75937 253 aaPredicted RBP12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 MEA1Q16626 185 aa12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 LACTB2Q53H82 288 aaPredicted RBP12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 IFIT1BQ5T764 474 aaKnown RBP12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 MB21D1Q8N884 522 aa12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 ZNF507Q8TCN5 953 aa12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 STAMQ92783 540 aa12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 TMX4Q9H1E5 349 aaPredicted RBP12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 JADE2Q9NQC1 790 aa12.76□□□□□ -0.37
SEC61A1-205ENST00000483956 A0A1B0GVG6 124 aa12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 CLTAP09496 248 aa12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 PARP1P09874 1014 aaKnown RBP12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 LONP1P36776 959 aaKnown RBP12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 HERVK_113P62684 666 aa12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 CFAP58Q5T655 872 aa12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 EMC10Q5UCC4 262 aa12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 SPATA21Q7Z572 469 aa12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 PNMA8AQ86V59 439 aaPredicted RBP12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 LUC7L2Q9Y383 392 aaKnown RBP12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 CICQ96RK0 1608 aaPredicted RBP12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 GMNCA6NCL1 334 aa12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 COBLO75128 1261 aa12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 PRCPP42785 496 aa12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 KRT83P78385 493 aa12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 ITGB3BPQ13352 177 aaPredicted RBP12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 BLMHQ13867 455 aa12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 IL17AQ16552 155 aa12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 ADSSL1Q8N142 457 aa12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 TSC22D3Q99576 134 aa12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 THAP9Q9H5L6 903 aa12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 LRP2BPQ9P2M1 347 aa12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 CACNA1SQ13698 1873 aa12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 SOS2Q07890 1332 aaPredicted RBP12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 ANO9A1A5B4 782 aa12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 MINDY4BA8MYZ0 360 aa12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 ECEL1O95672 775 aa12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 ABL2P42684 1182 aa12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 MTA1Q13330 715 aa12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 HHATQ5VTY9 493 aa12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 WDR59Q6PJI9 974 aa12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 CRELD2Q6UXH1 353 aaPredicted RBP12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 IQCKQ8N0W5 287 aa12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 MMGT1Q8N4V1 131 aa12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 AGAP11Q8TF27 550 aa12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 CAVIN3Q969G5 261 aa12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 SLC5A4Q9NY91 659 aa12.75□□□□□ -0.37
SEC61A1-205ENST00000483956 LAMB2P55268 1798 aa12.74□□□□□ -0.37
SEC61A1-205ENST00000483956 hCG_1642624A0A1W2PR95 340 aa12.74□□□□□ -0.37
SEC61A1-205ENST00000483956 A6NHS1 94 aa12.74□□□□□ -0.37
SEC61A1-205ENST00000483956 CYP7A1P22680 504 aa12.74□□□□□ -0.37
SEC61A1-205ENST00000483956 BCAMP50895 628 aa12.74□□□□□ -0.37
SEC61A1-205ENST00000483956 ROR2Q01974 943 aaKnown RBP12.74□□□□□ -0.37
SEC61A1-205ENST00000483956 IQCEQ6IPM2 695 aa12.74□□□□□ -0.37
SEC61A1-205ENST00000483956 ADGRA1Q86SQ6 560 aa12.74□□□□□ -0.37
SEC61A1-205ENST00000483956 SDR42E1Q8WUS8 393 aa12.74□□□□□ -0.37
SEC61A1-205ENST00000483956 L3MBTL3Q96JM7 780 aaPredicted RBP12.74□□□□□ -0.37
SEC61A1-205ENST00000483956 ATP6V1G3Q96LB4 118 aa12.74□□□□□ -0.37
SEC61A1-205ENST00000483956 BRIP1Q9BX63 1249 aa12.74□□□□□ -0.37
SEC61A1-205ENST00000483956 RGL1Q9NZL6 768 aa12.74□□□□□ -0.37
SEC61A1-205ENST00000483956 MAGEB6P1A0A0J9YX57 407 aa12.74□□□□□ -0.37
SEC61A1-205ENST00000483956 SNAP23O00161 211 aa12.74□□□□□ -0.37
SEC61A1-205ENST00000483956 MYL1P05976 194 aa12.74□□□□□ -0.37
SEC61A1-205ENST00000483956 FAM153BP0C7A2 387 aa12.74□□□□□ -0.37
SEC61A1-205ENST00000483956 FERP16591 822 aa12.74□□□□□ -0.37
SEC61A1-205ENST00000483956 ATP4AP20648 1035 aa12.74□□□□□ -0.37
SEC61A1-205ENST00000483956 CTCFP49711 727 aaPredicted RBP12.74□□□□□ -0.37
SEC61A1-205ENST00000483956 FAM153CQ494X1 144 aa12.74□□□□□ -0.37
SEC61A1-205ENST00000483956 CACNA2D3Q8IZS8 1091 aa12.74□□□□□ -0.37
SEC61A1-205ENST00000483956 CCT6BQ92526 530 aa12.74□□□□□ -0.37
SEC61A1-205ENST00000483956 TBC1D5Q92609 795 aa12.74□□□□□ -0.37
SEC61A1-205ENST00000483956 ALS2CR12Q96Q35 445 aa12.74□□□□□ -0.37
SEC61A1-205ENST00000483956 SMARCAL1Q9NZC9 954 aa12.74□□□□□ -0.37
SEC61A1-205ENST00000483956 NOP53Q9NZM5 478 aaKnown RBP12.74□□□□□ -0.37
SEC61A1-205ENST00000483956 FAM153AQ9UHL3 310 aa12.74□□□□□ -0.37
SEC61A1-205ENST00000483956 KRT86O43790 486 aa12.73□□□□□ -0.37
SEC61A1-205ENST00000483956 IDEP14735 1019 aa12.73□□□□□ -0.37
SEC61A1-205ENST00000483956 TSR1Q2NL82 804 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms