RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 STK4Q13043 487 aa9.93□□□□□ -0.82
CDC42SE1-204ENST00000483763 SPP2Q13103 211 aa9.93□□□□□ -0.82
CDC42SE1-204ENST00000483763 TMEM266Q2M3C6 531 aa9.93□□□□□ -0.82
CDC42SE1-204ENST00000483763 SPATA1Q5VX52 437 aa9.93□□□□□ -0.82
CDC42SE1-204ENST00000483763 SNX29Q8TEQ0 813 aa9.93□□□□□ -0.82
CDC42SE1-204ENST00000483763 KIAA1683Q9H0B3 1180 aa9.93□□□□□ -0.82
CDC42SE1-204ENST00000483763 FEM1BQ9UK73 627 aa9.93□□□□□ -0.82
CDC42SE1-204ENST00000483763 RHOBTB3O94955 611 aa9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 TPM3P06753 285 aa9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 CCZ1BP86790 482 aa9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 CCZ1P86791 482 aaPredicted RBP9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 GOLGA8FQ08AF8 430 aa9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 GOLGA8DPQ0D2H9 430 aa9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 CDKAL1Q5VV42 579 aa9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 EEF2KMTQ96G04 330 aa9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 CALML4Q96GE6 196 aa9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 WNK4Q96J92 1243 aa9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 WRNIP1Q96S55 665 aa9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 C7orf25Q9BPX7 421 aa9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 CUEDC2Q9H467 287 aa9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 TAF1DQ9H5J8 278 aaPredicted RBP9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 SH2D4AQ9H788 454 aa9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 IGLV3-22A0A075B6J6 115 aa9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 TRAF5O00463 557 aa9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 MSH4O15457 936 aa9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 MARCH6O60337 910 aa9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 TOMM70O94826 608 aa9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 FOSP01100 380 aaPredicted RBP9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 VCAM1P19320 739 aa9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 CIITAP33076 1130 aa9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 KCNB1Q14721 858 aa9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 TMEM119Q4V9L6 283 aa9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 KRT79Q5XKE5 535 aa9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 FAM160B2Q86V87 743 aa9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 ADSSL1Q8N142 457 aa9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 GIMAP8Q8ND71 665 aaPredicted RBP9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 NELFBQ8WX92 580 aa9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 LARP4BQ92615 738 aaKnown RBP9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 SPTLC3Q9NUV7 552 aa9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 POLR2AP24928 1970 aaKnown RBP9.92□□□□□ -0.82
CDC42SE1-204ENST00000483763 NFIBO00712 420 aa9.91□□□□□ -0.82
CDC42SE1-204ENST00000483763 TEX33O43247 280 aa9.91□□□□□ -0.82
CDC42SE1-204ENST00000483763 OFD1O75665 1012 aa9.91□□□□□ -0.82
CDC42SE1-204ENST00000483763 MYL1P05976 194 aa9.91□□□□□ -0.82
CDC42SE1-204ENST00000483763 PTPRAP18433 802 aa9.91□□□□□ -0.82
CDC42SE1-204ENST00000483763 EPHX2P34913 555 aa9.91□□□□□ -0.82
CDC42SE1-204ENST00000483763 ASIC1P78348 528 aa9.91□□□□□ -0.82
CDC42SE1-204ENST00000483763 PAK1Q13153 545 aa9.91□□□□□ -0.82
CDC42SE1-204ENST00000483763 Q4G0T1 1027 aa9.91□□□□□ -0.82
CDC42SE1-204ENST00000483763 CT47A1Q5JQC4 288 aaPredicted RBP9.91□□□□□ -0.82
CDC42SE1-204ENST00000483763 MOXD1Q6UVY6 613 aa9.91□□□□□ -0.82
CDC42SE1-204ENST00000483763 DYMQ7RTS9 669 aa9.91□□□□□ -0.82
CDC42SE1-204ENST00000483763 IRF2BP1Q8IU81 584 aa9.91□□□□□ -0.82
CDC42SE1-204ENST00000483763 VSTM4Q8IW00 320 aa9.91□□□□□ -0.82
CDC42SE1-204ENST00000483763 CPXCR1Q8N123 301 aa9.91□□□□□ -0.82
CDC42SE1-204ENST00000483763 PRPF38AQ8NAV1 312 aaKnown RBP9.91□□□□□ -0.82
CDC42SE1-204ENST00000483763 RAD54LQ92698 747 aa9.91□□□□□ -0.82
CDC42SE1-204ENST00000483763 WDR18Q9BV38 432 aa9.91□□□□□ -0.82
CDC42SE1-204ENST00000483763 RAB34Q9BZG1 259 aa9.91□□□□□ -0.82
CDC42SE1-204ENST00000483763 RMND1Q9NWS8 449 aa9.91□□□□□ -0.82
CDC42SE1-204ENST00000483763 COL20A1Q9P218 1284 aa9.91□□□□□ -0.82
CDC42SE1-204ENST00000483763 RWDD2AQ9UIY3 292 aa9.91□□□□□ -0.82
CDC42SE1-204ENST00000483763 ZNF112Q9UJU3 913 aa9.91□□□□□ -0.82
CDC42SE1-204ENST00000483763 ATAD5Q96QE3 1844 aa9.91□□□□□ -0.82
CDC42SE1-204ENST00000483763 POTEB3A0JP26 581 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 E9PMD0 336 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 WDR46O15213 610 aaKnown RBP9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 MED24O75448 989 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 SKILP12757 684 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 PRKG1Q13976 671 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 NR1I3Q14994 352 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 POTEBQ6S5H4 581 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 SV2BQ7L1I2 683 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 APOBEC3FQ8IUX4 373 aaKnown RBP9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 KIAA0895Q8NCT3 520 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 GLIS3Q8NEA6 775 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 CLEC4DQ8WXI8 215 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 LPAR1Q92633 364 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 SLF1Q9BQI6 1058 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 TANGO6Q9C0B7 1094 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 KIAA1024Q9UPX6 916 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 SSC5DA1L4H1 1573 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 A0A1B0GTH6 734 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 GCOM1H8Y6P7 765 aaPredicted RBP9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 NKRFO15226 690 aaKnown RBP eCLIP9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 FLOT1O75955 427 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 ICAM1P05362 532 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 CYP3A4P08684 503 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 POLR2MP0CAP2 368 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 PSMC6P62333 389 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 PDE4DQ08499 809 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 CATSPER3Q86XQ3 398 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 IFNLR1Q8IU57 520 aaPredicted RBP9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 SCYL3Q8IZE3 742 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 DDX12PQ92771 950 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 KLRG1Q96E93 195 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 RPAP3Q9H6T3 665 aaPredicted RBP9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 MAGEF1Q9HAY2 307 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 RAVER2Q9HCJ3 691 aaKnown RBP9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 HOMER2Q9NSB8 354 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms