RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 FBXO16Q8IX29 292 aaPredicted RBP11.09□□□□□ -0.63
HMG20B-210ENST00000483417 GPKOWQ92917 476 aaPredicted RBP eCLIP11.09□□□□□ -0.63
HMG20B-210ENST00000483417 GLT1D1Q96MS3 346 aa11.09□□□□□ -0.63
HMG20B-210ENST00000483417 LZTS2Q9BRK4 669 aa11.09□□□□□ -0.63
HMG20B-210ENST00000483417 SLC26A6Q9BXS9 759 aa11.09□□□□□ -0.63
HMG20B-210ENST00000483417 SPC25Q9HBM1 224 aa11.09□□□□□ -0.63
HMG20B-210ENST00000483417 PRDM5Q9NQX1 630 aaPredicted RBP11.09□□□□□ -0.63
HMG20B-210ENST00000483417 RBM28Q9NW13 759 aaKnown RBP11.09□□□□□ -0.63
HMG20B-210ENST00000483417 TBX21Q9UL17 535 aa11.09□□□□□ -0.63
HMG20B-210ENST00000483417 LRRC37A2A6NM11 1700 aa11.09□□□□□ -0.63
HMG20B-210ENST00000483417 CNTNAP5Q8WYK1 1306 aa11.09□□□□□ -0.63
HMG20B-210ENST00000483417 PTPDC1A2A3K4 754 aa11.08□□□□□ -0.64
HMG20B-210ENST00000483417 PQBP1O60828 265 aaKnown RBP11.08□□□□□ -0.64
HMG20B-210ENST00000483417 CD4P01730 458 aa11.08□□□□□ -0.64
HMG20B-210ENST00000483417 CALML3P27482 149 aa11.08□□□□□ -0.64
HMG20B-210ENST00000483417 RCAN1P53805 252 aa11.08□□□□□ -0.64
HMG20B-210ENST00000483417 FSCN1Q16658 493 aaKnown RBP11.08□□□□□ -0.64
HMG20B-210ENST00000483417 DUSP28Q4G0W2 176 aa11.08□□□□□ -0.64
HMG20B-210ENST00000483417 C9orf50Q5SZB4 431 aa11.08□□□□□ -0.64
HMG20B-210ENST00000483417 TLK2Q86UE8 772 aa11.08□□□□□ -0.64
HMG20B-210ENST00000483417 FBXO11Q86XK2 927 aa11.08□□□□□ -0.64
HMG20B-210ENST00000483417 DNERQ8NFT8 737 aa11.08□□□□□ -0.64
HMG20B-210ENST00000483417 GTF3C6Q969F1 213 aa11.08□□□□□ -0.64
HMG20B-210ENST00000483417 RRP36Q96EU6 259 aaKnown RBP11.08□□□□□ -0.64
HMG20B-210ENST00000483417 TMEM39AQ9NV64 488 aa11.08□□□□□ -0.64
HMG20B-210ENST00000483417 COL20A1Q9P218 1284 aa11.08□□□□□ -0.64
HMG20B-210ENST00000483417 PCDHA1Q9Y5I3 950 aa11.08□□□□□ -0.64
HMG20B-210ENST00000483417 NID2Q14112 1375 aa11.07□□□□□ -0.64
HMG20B-210ENST00000483417 DCDC2CA8MYV0 355 aa11.07□□□□□ -0.64
HMG20B-210ENST00000483417 ST18O60284 1047 aa11.07□□□□□ -0.64
HMG20B-210ENST00000483417 GHRHRQ02643 423 aa11.07□□□□□ -0.64
HMG20B-210ENST00000483417 SSRP1Q08945 709 aaKnown RBP11.07□□□□□ -0.64
HMG20B-210ENST00000483417 PPP2R5BQ15173 497 aa11.07□□□□□ -0.64
HMG20B-210ENST00000483417 WWC2Q6AWC2 1192 aa11.07□□□□□ -0.64
HMG20B-210ENST00000483417 CXCL17Q6UXB2 119 aa11.07□□□□□ -0.64
HMG20B-210ENST00000483417 FAM126BQ8IXS8 530 aa11.07□□□□□ -0.64
HMG20B-210ENST00000483417 NSUN7Q8NE18 718 aaKnown RBP11.07□□□□□ -0.64
HMG20B-210ENST00000483417 SYTL5Q8TDW5 730 aaPredicted RBP11.07□□□□□ -0.64
HMG20B-210ENST00000483417 ZSCAN31Q96LW9 406 aaPredicted RBP11.07□□□□□ -0.64
HMG20B-210ENST00000483417 TAAR1Q96RJ0 339 aa11.07□□□□□ -0.64
HMG20B-210ENST00000483417 WDR11Q9BZH6 1224 aa11.07□□□□□ -0.64
HMG20B-210ENST00000483417 AP5M1Q9H0R1 490 aa11.07□□□□□ -0.64
HMG20B-210ENST00000483417 ABCB11O95342 1321 aa11.07□□□□□ -0.64
HMG20B-210ENST00000483417 A0A0U1RQG5 324 aaPredicted RBP11.06□□□□□ -0.64
HMG20B-210ENST00000483417 CCDC196A0A1B0GTZ2 297 aa11.06□□□□□ -0.64
HMG20B-210ENST00000483417 STXBP3O00186 592 aa11.06□□□□□ -0.64
HMG20B-210ENST00000483417 CABYRO75952 493 aa11.06□□□□□ -0.64
HMG20B-210ENST00000483417 TIMP1P01033 207 aa11.06□□□□□ -0.64
HMG20B-210ENST00000483417 RAG1P15918 1043 aa11.06□□□□□ -0.64
HMG20B-210ENST00000483417 PFKFB3Q16875 520 aaPredicted RBP11.06□□□□□ -0.64
HMG20B-210ENST00000483417 FAM109BQ6ICB4 259 aaPredicted RBP11.06□□□□□ -0.64
HMG20B-210ENST00000483417 CCDC62Q6P9F0 684 aa11.06□□□□□ -0.64
HMG20B-210ENST00000483417 Q7L0L9 218 aa11.06□□□□□ -0.64
HMG20B-210ENST00000483417 C16orf59Q7L2K0 433 aa11.06□□□□□ -0.64
HMG20B-210ENST00000483417 AMNQ9BXJ7 453 aa11.06□□□□□ -0.64
HMG20B-210ENST00000483417 FOXD4L1Q9NU39 408 aa11.06□□□□□ -0.64
HMG20B-210ENST00000483417 MTMR10Q9NXD2 777 aa11.06□□□□□ -0.64
HMG20B-210ENST00000483417 MROH7Q68CQ1 1323 aa11.06□□□□□ -0.64
HMG20B-210ENST00000483417 CPLX1O14810 134 aa11.05□□□□□ -0.64
HMG20B-210ENST00000483417 HOXA13P31271 388 aaPredicted RBP11.05□□□□□ -0.64
HMG20B-210ENST00000483417 FOSBP53539 338 aa11.05□□□□□ -0.64
HMG20B-210ENST00000483417 PDE4DQ08499 809 aa11.05□□□□□ -0.64
HMG20B-210ENST00000483417 ITGA7Q13683 1181 aa11.05□□□□□ -0.64
HMG20B-210ENST00000483417 MFSD5Q6N075 450 aa11.05□□□□□ -0.64
HMG20B-210ENST00000483417 USP17L6PQ6QN14 398 aa11.05□□□□□ -0.64
HMG20B-210ENST00000483417 HEATR3Q7Z4Q2 680 aa11.05□□□□□ -0.64
HMG20B-210ENST00000483417 DEFB123Q8N688 67 aa11.05□□□□□ -0.64
HMG20B-210ENST00000483417 SMARCC2Q8TAQ2 1214 aa11.05□□□□□ -0.64
HMG20B-210ENST00000483417 SNX21Q969T3 373 aa11.05□□□□□ -0.64
HMG20B-210ENST00000483417 VTI1AQ96AJ9 217 aa11.05□□□□□ -0.64
HMG20B-210ENST00000483417 ZFP91Q96JP5 570 aaPredicted RBP11.05□□□□□ -0.64
HMG20B-210ENST00000483417 SEZ6LQ9BYH1 1024 aa11.05□□□□□ -0.64
HMG20B-210ENST00000483417 ORC3Q9UBD5 711 aaPredicted RBP11.05□□□□□ -0.64
HMG20B-210ENST00000483417 MRPL11Q9Y3B7 192 aaKnown RBP11.05□□□□□ -0.64
HMG20B-210ENST00000483417 A6NJR5 290 aa11.04□□□□□ -0.64
HMG20B-210ENST00000483417 MEIS2O14770 477 aa11.04□□□□□ -0.64
HMG20B-210ENST00000483417 ARIH2O95376 493 aa11.04□□□□□ -0.64
HMG20B-210ENST00000483417 SCG2P13521 617 aa11.04□□□□□ -0.64
HMG20B-210ENST00000483417 HSD17B4P51659 736 aa11.04□□□□□ -0.64
HMG20B-210ENST00000483417 PURAQ00577 322 aaKnown RBP11.04□□□□□ -0.64
HMG20B-210ENST00000483417 CUL4AQ13619 759 aa11.04□□□□□ -0.64
HMG20B-210ENST00000483417 MCF2L2Q86YR7 1114 aa11.04□□□□□ -0.64
HMG20B-210ENST00000483417 SPRYD3Q8NCJ5 442 aa11.04□□□□□ -0.64
HMG20B-210ENST00000483417 NSUN6Q8TEA1 469 aaKnown RBP11.04□□□□□ -0.64
HMG20B-210ENST00000483417 SCFD2Q8WU76 684 aa11.04□□□□□ -0.64
HMG20B-210ENST00000483417 COPS5Q92905 334 aa11.04□□□□□ -0.64
HMG20B-210ENST00000483417 IWS1Q96ST2 819 aa11.04□□□□□ -0.64
HMG20B-210ENST00000483417 RNF26Q9BY78 433 aaPredicted RBP11.04□□□□□ -0.64
HMG20B-210ENST00000483417 SH2B1Q9NRF2 756 aaPredicted RBP11.04□□□□□ -0.64
HMG20B-210ENST00000483417 TMEM260Q9NX78 707 aa11.04□□□□□ -0.64
HMG20B-210ENST00000483417 MAP3K20Q9NYL2 800 aaKnown RBP11.04□□□□□ -0.64
HMG20B-210ENST00000483417 VPS54Q9P1Q0 977 aa11.04□□□□□ -0.64
HMG20B-210ENST00000483417 KCNJ14Q9UNX9 436 aa11.04□□□□□ -0.64
HMG20B-210ENST00000483417 SMCO2A6NFE2 343 aa11.03□□□□□ -0.64
HMG20B-210ENST00000483417 B4DLN1 442 aa11.03□□□□□ -0.64
HMG20B-210ENST00000483417 NKRFO15226 690 aaKnown RBP eCLIP11.03□□□□□ -0.64
HMG20B-210ENST00000483417 EDIL3O43854 480 aa11.03□□□□□ -0.64
HMG20B-210ENST00000483417 ZEB2O60315 1214 aa11.03□□□□□ -0.64
HMG20B-210ENST00000483417 CFBP00751 764 aa11.03□□□□□ -0.64
HMG20B-210ENST00000483417 TXNP10599 105 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms