RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 TSPY26PQ9H489 355 aa8.95□□□□□ -0.98
SNX13-208ENST00000482558 PRDM10Q9NQV6 1147 aa8.95□□□□□ -0.98
SNX13-208ENST00000482558 CNNM1Q9NRU3 951 aa8.95□□□□□ -0.98
SNX13-208ENST00000482558 TCEAL9Q9UHQ7 104 aa8.95□□□□□ -0.98
SNX13-208ENST00000482558 GGT7Q9UJ14 662 aa8.95□□□□□ -0.98
SNX13-208ENST00000482558 CFAP45Q9UL16 551 aa8.95□□□□□ -0.98
SNX13-208ENST00000482558 PNMA2Q9UL42 364 aa8.95□□□□□ -0.98
SNX13-208ENST00000482558 TTF2Q9UNY4 1162 aaKnown RBP8.95□□□□□ -0.98
SNX13-208ENST00000482558 MYH3P11055 1940 aa8.94□□□□□ -0.98
SNX13-208ENST00000482558 TOM1O60784 492 aa8.94□□□□□ -0.98
SNX13-208ENST00000482558 PDE8BO95263 885 aa8.94□□□□□ -0.98
SNX13-208ENST00000482558 CYP21A2P08686 494 aa8.94□□□□□ -0.98
SNX13-208ENST00000482558 CTSHP09668 335 aa8.94□□□□□ -0.98
SNX13-208ENST00000482558 RARAP10276 462 aa8.94□□□□□ -0.98
SNX13-208ENST00000482558 HSPD1P10809 573 aaKnown RBP8.94□□□□□ -0.98
SNX13-208ENST00000482558 HMGB2P26583 209 aaKnown RBP8.94□□□□□ -0.98
SNX13-208ENST00000482558 TARSP26639 723 aaKnown RBP8.94□□□□□ -0.98
SNX13-208ENST00000482558 MCM5P33992 734 aa8.94□□□□□ -0.98
SNX13-208ENST00000482558 EVCP57679 992 aa8.94□□□□□ -0.98
SNX13-208ENST00000482558 PAK2Q13177 524 aa8.94□□□□□ -0.98
SNX13-208ENST00000482558 ORC1Q13415 861 aa8.94□□□□□ -0.98
SNX13-208ENST00000482558 TOB2Q14106 344 aaPredicted RBP8.94□□□□□ -0.98
SNX13-208ENST00000482558 UBE3CQ15386 1083 aa8.94□□□□□ -0.98
SNX13-208ENST00000482558 PUM3Q15397 648 aaKnown RBP8.94□□□□□ -0.98
SNX13-208ENST00000482558 CCDC152Q4G0S7 254 aa8.94□□□□□ -0.98
SNX13-208ENST00000482558 NAA16Q6N069 864 aaPredicted RBP8.94□□□□□ -0.98
SNX13-208ENST00000482558 FBF1Q8TES7 1133 aa8.94□□□□□ -0.98
SNX13-208ENST00000482558 UTP14AQ9BVJ6 771 aaKnown RBP8.94□□□□□ -0.98
SNX13-208ENST00000482558 RAXQ9Y2V3 346 aa8.94□□□□□ -0.98
SNX13-208ENST00000482558 COMMD10Q9Y6G5 202 aa8.94□□□□□ -0.98
SNX13-208ENST00000482558 ZMYM6O95789 1325 aa8.94□□□□□ -0.98
SNX13-208ENST00000482558 SPATA31A5Q5VU36 1347 aa8.94□□□□□ -0.98
SNX13-208ENST00000482558 SPATA31A7Q8IWB4 1347 aa8.94□□□□□ -0.98
SNX13-208ENST00000482558 CARMIL3Q8ND23 1372 aa8.94□□□□□ -0.98
SNX13-208ENST00000482558 VPS37CA5D8V6 355 aaPredicted RBP8.93□□□□□ -0.98
SNX13-208ENST00000482558 TNFRSF21O75509 655 aa8.93□□□□□ -0.98
SNX13-208ENST00000482558 CAVIN2O95810 425 aa8.93□□□□□ -0.98
SNX13-208ENST00000482558 EGFRP00533 1210 aa8.93□□□□□ -0.98
SNX13-208ENST00000482558 SSBP05455 408 aaKnown RBP eCLIP8.93□□□□□ -0.98
SNX13-208ENST00000482558 SLC5A1P13866 664 aa8.93□□□□□ -0.98
SNX13-208ENST00000482558 EXOSC10Q01780 885 aaKnown RBP8.93□□□□□ -0.98
SNX13-208ENST00000482558 MLLT1Q03111 559 aaPredicted RBP8.93□□□□□ -0.98
SNX13-208ENST00000482558 UBE4AQ14139 1066 aa8.93□□□□□ -0.98
SNX13-208ENST00000482558 XKR5Q6UX68 686 aa8.93□□□□□ -0.98
SNX13-208ENST00000482558 Q6ZUG5 572 aa8.93□□□□□ -0.98
SNX13-208ENST00000482558 SYTL4Q96C24 671 aaPredicted RBP8.93□□□□□ -0.98
SNX13-208ENST00000482558 CDC5LQ99459 802 aaKnown RBP8.93□□□□□ -0.98
SNX13-208ENST00000482558 IER2Q9BTL4 223 aa8.93□□□□□ -0.98
SNX13-208ENST00000482558 TRIM55Q9BYV6 548 aa8.93□□□□□ -0.98
SNX13-208ENST00000482558 ELP3Q9H9T3 547 aa8.93□□□□□ -0.98
SNX13-208ENST00000482558 GNL3LQ9NVN8 582 aaKnown RBP8.93□□□□□ -0.98
SNX13-208ENST00000482558 FANCLQ9NW38 375 aa8.93□□□□□ -0.98
SNX13-208ENST00000482558 TMEM63CQ9P1W3 806 aa8.93□□□□□ -0.98
SNX13-208ENST00000482558 FOXD3Q9UJU5 478 aaPredicted RBP8.93□□□□□ -0.98
SNX13-208ENST00000482558 ZBTB1Q9Y2K1 713 aa8.93□□□□□ -0.98
SNX13-208ENST00000482558 OAS3Q9Y6K5 1087 aaKnown RBP8.93□□□□□ -0.98
SNX13-208ENST00000482558 MAST3O60307 1309 aa8.93□□□□□ -0.98
SNX13-208ENST00000482558 ATRNO75882 1429 aa8.93□□□□□ -0.98
SNX13-208ENST00000482558 RREB1Q92766 1687 aa8.93□□□□□ -0.98
SNX13-208ENST00000482558 NRAPQ86VF7 1730 aa8.93□□□□□ -0.98
SNX13-208ENST00000482558 NUP98P52948 1817 aa8.92□□□□□ -0.98
SNX13-208ENST00000482558 PHLPP1O60346 1717 aa8.92□□□□□ -0.98
SNX13-208ENST00000482558 LTBP4Q8N2S1 1624 aa8.92□□□□□ -0.98
SNX13-208ENST00000482558 LOC102724428A0A0B4J2F2 783 aa8.92□□□□□ -0.98
SNX13-208ENST00000482558 GOLGA6L4A6NEF3 574 aa8.92□□□□□ -0.98
SNX13-208ENST00000482558 E7EWF7 191 aa8.92□□□□□ -0.98
SNX13-208ENST00000482558 H3BQV1 296 aa8.92□□□□□ -0.98
SNX13-208ENST00000482558 EIF1AYO14602 144 aaKnown RBP8.92□□□□□ -0.98
SNX13-208ENST00000482558 WDHD1O75717 1129 aaPredicted RBP8.92□□□□□ -0.98
SNX13-208ENST00000482558 ALX3O95076 343 aa8.92□□□□□ -0.98
SNX13-208ENST00000482558 LARGE1O95461 756 aa8.92□□□□□ -0.98
SNX13-208ENST00000482558 IGLV1-40P01703 118 aa8.92□□□□□ -0.98
SNX13-208ENST00000482558 CPA1P15085 419 aa8.92□□□□□ -0.98
SNX13-208ENST00000482558 TAL1P17542 331 aaPredicted RBP8.92□□□□□ -0.98
SNX13-208ENST00000482558 GNAT2P19087 354 aa8.92□□□□□ -0.98
SNX13-208ENST00000482558 IGHMBP2P38935 993 aaKnown RBP8.92□□□□□ -0.98
SNX13-208ENST00000482558 GP2P55259 537 aaKnown RBP8.92□□□□□ -0.98
SNX13-208ENST00000482558 SIK1P57059 783 aa8.92□□□□□ -0.98
SNX13-208ENST00000482558 TRDNQ13061 729 aa8.92□□□□□ -0.98
SNX13-208ENST00000482558 ALX1Q15699 326 aa8.92□□□□□ -0.98
SNX13-208ENST00000482558 HLFQ16534 295 aa8.92□□□□□ -0.98
SNX13-208ENST00000482558 KRT25Q7Z3Z0 450 aa8.92□□□□□ -0.98
SNX13-208ENST00000482558 C11orf96Q7Z7L8 435 aa8.92□□□□□ -0.98
SNX13-208ENST00000482558 NCOA7Q8NI08 942 aa8.92□□□□□ -0.98
SNX13-208ENST00000482558 SMARCC2Q8TAQ2 1214 aa8.92□□□□□ -0.98
SNX13-208ENST00000482558 EDC3Q96F86 508 aaKnown RBP8.92□□□□□ -0.98
SNX13-208ENST00000482558 PDLIM2Q96JY6 352 aa8.92□□□□□ -0.98
SNX13-208ENST00000482558 CSRNP1Q96S65 589 aa8.92□□□□□ -0.98
SNX13-208ENST00000482558 MPHOSPH8Q99549 860 aa8.92□□□□□ -0.98
SNX13-208ENST00000482558 MTA3Q9BTC8 594 aa8.92□□□□□ -0.98
SNX13-208ENST00000482558 PUS3Q9BZE2 481 aaKnown RBP8.92□□□□□ -0.98
SNX13-208ENST00000482558 ABI2Q9NYB9 513 aaPredicted RBP8.92□□□□□ -0.98
SNX13-208ENST00000482558 SLIT2O94813 1529 aa8.91□□□□□ -0.98
SNX13-208ENST00000482558 RIC1Q4ADV7 1423 aa8.91□□□□□ -0.98
SNX13-208ENST00000482558 SYCE3A1L190 88 aa8.91□□□□□ -0.98
SNX13-208ENST00000482558 ZNF213O14771 459 aa8.91□□□□□ -0.98
SNX13-208ENST00000482558 CPNE3O75131 537 aaKnown RBP8.91□□□□□ -0.98
SNX13-208ENST00000482558 PHACTR2O75167 634 aa8.91□□□□□ -0.98
SNX13-208ENST00000482558 SASH3O75995 380 aa8.91□□□□□ -0.98
SNX13-208ENST00000482558 EIF2AK2P19525 551 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms