RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 LHFPL2Q6ZUX7 228 aa7.26□□□□□ -1.25
UPF3A-207ENST00000481131 UBE2R2Q712K3 238 aaPredicted RBP7.26□□□□□ -1.25
UPF3A-207ENST00000481131 DDX53Q86TM3 631 aaKnown RBP7.26□□□□□ -1.25
UPF3A-207ENST00000481131 VSIG10LQ86VR7 867 aa7.26□□□□□ -1.25
UPF3A-207ENST00000481131 ANKLE2Q86XL3 938 aa7.26□□□□□ -1.25
UPF3A-207ENST00000481131 MTA3Q9BTC8 594 aa7.26□□□□□ -1.25
UPF3A-207ENST00000481131 CELF4Q9BZC1 486 aaKnown RBP7.26□□□□□ -1.25
UPF3A-207ENST00000481131 PAK6Q9NQU5 681 aaPredicted RBP7.26□□□□□ -1.25
UPF3A-207ENST00000481131 BTG4Q9NY30 223 aa7.26□□□□□ -1.25
UPF3A-207ENST00000481131 TMEM59LQ9UK28 342 aa7.26□□□□□ -1.25
UPF3A-207ENST00000481131 CBLCQ9ULV8 474 aa7.26□□□□□ -1.25
UPF3A-207ENST00000481131 A0A1W2PQ45 241 aaPredicted RBP7.25□□□□□ -1.25
UPF3A-207ENST00000481131 A0A1W2PQY0 241 aa7.25□□□□□ -1.25
UPF3A-207ENST00000481131 CCDC66A2RUB6 948 aa7.25□□□□□ -1.25
UPF3A-207ENST00000481131 M0R2C6 588 aa7.25□□□□□ -1.25
UPF3A-207ENST00000481131 TRAF5O00463 557 aa7.25□□□□□ -1.25
UPF3A-207ENST00000481131 MSL3P1P0C860 447 aa7.25□□□□□ -1.25
UPF3A-207ENST00000481131 PYGMP11217 842 aa7.25□□□□□ -1.25
UPF3A-207ENST00000481131 MECP2P51608 486 aaKnown RBP7.25□□□□□ -1.25
UPF3A-207ENST00000481131 RTP1P59025 263 aa7.25□□□□□ -1.25
UPF3A-207ENST00000481131 DUSP4Q13115 394 aa7.25□□□□□ -1.25
UPF3A-207ENST00000481131 KIR3DS1Q14943 382 aa7.25□□□□□ -1.25
UPF3A-207ENST00000481131 HSF5Q4G112 596 aaPredicted RBP7.25□□□□□ -1.25
UPF3A-207ENST00000481131 TMEM177Q53S58 311 aa7.25□□□□□ -1.25
UPF3A-207ENST00000481131 OVCH1Q7RTY7 1134 aa7.25□□□□□ -1.25
UPF3A-207ENST00000481131 TEX2Q8IWB9 1127 aa7.25□□□□□ -1.25
UPF3A-207ENST00000481131 PLEKHO2Q8TD55 490 aa7.25□□□□□ -1.25
UPF3A-207ENST00000481131 WNK4Q96J92 1243 aa7.25□□□□□ -1.25
UPF3A-207ENST00000481131 CHAMP1Q96JM3 812 aa7.25□□□□□ -1.25
UPF3A-207ENST00000481131 PLCD4Q9BRC7 762 aa7.25□□□□□ -1.25
UPF3A-207ENST00000481131 JAM3Q9BX67 310 aa7.25□□□□□ -1.25
UPF3A-207ENST00000481131 SP110Q9HB58 689 aa7.25□□□□□ -1.25
UPF3A-207ENST00000481131 GOLGA2P5Q9HBQ8 144 aa7.25□□□□□ -1.25
UPF3A-207ENST00000481131 C19orf73Q9NVV2 129 aa7.25□□□□□ -1.25
UPF3A-207ENST00000481131 CLDND1Q9NY35 253 aa7.25□□□□□ -1.25
UPF3A-207ENST00000481131 ADAMTS6Q9UKP5 1117 aa7.25□□□□□ -1.25
UPF3A-207ENST00000481131 WTIPA6NIX2 430 aaPredicted RBP7.24□□□□□ -1.25
UPF3A-207ENST00000481131 ZNF891A8MT65 544 aaPredicted RBP7.24□□□□□ -1.25
UPF3A-207ENST00000481131 FAM47E-STBD1D6RA91 191 aa7.24□□□□□ -1.25
UPF3A-207ENST00000481131 FUT4P22083 530 aa7.24□□□□□ -1.25
UPF3A-207ENST00000481131 DNM2P50570 870 aa7.24□□□□□ -1.25
UPF3A-207ENST00000481131 GTF2A2P52657 109 aa7.24□□□□□ -1.25
UPF3A-207ENST00000481131 HK2P52789 917 aa7.24□□□□□ -1.25
UPF3A-207ENST00000481131 CEP128Q6ZU80 1094 aa7.24□□□□□ -1.25
UPF3A-207ENST00000481131 CEP68Q76N32 757 aa7.24□□□□□ -1.25
UPF3A-207ENST00000481131 CISD2Q8N5K1 135 aaKnown RBP7.24□□□□□ -1.25
UPF3A-207ENST00000481131 FLCNQ8NFG4 579 aa7.24□□□□□ -1.25
UPF3A-207ENST00000481131 NLGN2Q8NFZ4 835 aa7.24□□□□□ -1.25
UPF3A-207ENST00000481131 FBXW5Q969U6 566 aa7.24□□□□□ -1.25
UPF3A-207ENST00000481131 FMNL2Q96PY5 1086 aa7.24□□□□□ -1.25
UPF3A-207ENST00000481131 KCNJ15Q99712 375 aa7.24□□□□□ -1.25
UPF3A-207ENST00000481131 MARCH2Q9P0N8 246 aa7.24□□□□□ -1.25
UPF3A-207ENST00000481131 IMPACTQ9P2X3 320 aa7.24□□□□□ -1.25
UPF3A-207ENST00000481131 MCM8Q9UJA3 840 aa7.24□□□□□ -1.25
UPF3A-207ENST00000481131 RWDD3Q9Y3V2 267 aa7.24□□□□□ -1.25
UPF3A-207ENST00000481131 H7BY64 318 aa7.23□□□□□ -1.25
UPF3A-207ENST00000481131 WNT11O96014 354 aa7.23□□□□□ -1.25
UPF3A-207ENST00000481131 BPIP17213 487 aa7.23□□□□□ -1.25
UPF3A-207ENST00000481131 DSG1Q02413 1049 aa7.23□□□□□ -1.25
UPF3A-207ENST00000481131 MVKQ03426 396 aa7.23□□□□□ -1.25
UPF3A-207ENST00000481131 PLEKHG6Q3KR16 790 aa7.23□□□□□ -1.25
UPF3A-207ENST00000481131 C16orf59Q7L2K0 433 aa7.23□□□□□ -1.25
UPF3A-207ENST00000481131 NXPE1Q8N323 547 aa7.23□□□□□ -1.25
UPF3A-207ENST00000481131 ANKS4BQ8N8V4 417 aa7.23□□□□□ -1.25
UPF3A-207ENST00000481131 SYTL4Q96C24 671 aaPredicted RBP7.23□□□□□ -1.25
UPF3A-207ENST00000481131 ASIC4Q96FT7 647 aa7.23□□□□□ -1.25
UPF3A-207ENST00000481131 TMEM169Q96HH4 297 aa7.23□□□□□ -1.25
UPF3A-207ENST00000481131 X6R8D5 127 aa7.23□□□□□ -1.25
UPF3A-207ENST00000481131 C22orf46C9J442 243 aa7.22□□□□□ -1.25
UPF3A-207ENST00000481131 NEMP1O14524 444 aa7.22□□□□□ -1.25
UPF3A-207ENST00000481131 F2P00734 622 aa7.22□□□□□ -1.25
UPF3A-207ENST00000481131 FUCA1P04066 466 aa7.22□□□□□ -1.25
UPF3A-207ENST00000481131 PDGFRBP09619 1106 aa7.22□□□□□ -1.25
UPF3A-207ENST00000481131 YBX3P16989 372 aaKnown RBP eCLIP7.22□□□□□ -1.25
UPF3A-207ENST00000481131 ID4P47928 161 aa7.22□□□□□ -1.25
UPF3A-207ENST00000481131 CORO7P57737 925 aa7.22□□□□□ -1.25
UPF3A-207ENST00000481131 ERVFC1P60507 584 aa7.22□□□□□ -1.25
UPF3A-207ENST00000481131 STAT4Q14765 748 aa7.22□□□□□ -1.25
UPF3A-207ENST00000481131 TIGD5Q53EQ6 642 aa7.22□□□□□ -1.25
UPF3A-207ENST00000481131 HABP4Q5JVS0 413 aaKnown RBP7.22□□□□□ -1.25
UPF3A-207ENST00000481131 SLC23A3Q6PIS1 610 aa7.22□□□□□ -1.25
UPF3A-207ENST00000481131 KIF18BQ86Y91 864 aa7.22□□□□□ -1.25
UPF3A-207ENST00000481131 ABI1Q8IZP0 508 aa7.22□□□□□ -1.25
UPF3A-207ENST00000481131 PDZD8Q8NEN9 1154 aa7.22□□□□□ -1.25
UPF3A-207ENST00000481131 ATL2Q8NHH9 583 aa7.22□□□□□ -1.25
UPF3A-207ENST00000481131 TYW1Q9NV66 732 aaKnown RBP7.22□□□□□ -1.25
UPF3A-207ENST00000481131 B4GALT6Q9UBX8 382 aa7.22□□□□□ -1.25
UPF3A-207ENST00000481131 ADGRE2Q9UHX3 823 aa7.22□□□□□ -1.25
UPF3A-207ENST00000481131 ACSL6Q9UKU0 697 aa7.22□□□□□ -1.25
UPF3A-207ENST00000481131 TCRBV5S4A2TA0A5A2 114 aa7.21□□□□□ -1.26
UPF3A-207ENST00000481131 NRDCO43847 1150 aa7.21□□□□□ -1.26
UPF3A-207ENST00000481131 AMY2AP04746 511 aa7.21□□□□□ -1.26
UPF3A-207ENST00000481131 APPP05067 770 aa7.21□□□□□ -1.26
UPF3A-207ENST00000481131 AMY2BP19961 511 aa7.21□□□□□ -1.26
UPF3A-207ENST00000481131 TACR1P25103 407 aa7.21□□□□□ -1.26
UPF3A-207ENST00000481131 FAM50AQ14320 339 aaKnown RBP7.21□□□□□ -1.26
UPF3A-207ENST00000481131 BRDTQ58F21 947 aaPredicted RBP7.21□□□□□ -1.26
UPF3A-207ENST00000481131 FAM47CQ5HY64 1035 aa7.21□□□□□ -1.26
UPF3A-207ENST00000481131 CREB3L3Q68CJ9 461 aa7.21□□□□□ -1.26
UPF3A-207ENST00000481131 FSTL4Q6MZW2 842 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms