RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 DPEP1P16444 411 aa14.54□□□□□ -0.08
SEC13-216ENST00000479868 DLGAP5Q15398 846 aa14.54□□□□□ -0.08
SEC13-216ENST00000479868 NOC3LQ8WTT2 800 aaKnown RBP14.54□□□□□ -0.08
SEC13-216ENST00000479868 ATRIPQ8WXE1 791 aa14.54□□□□□ -0.08
SEC13-216ENST00000479868 ERO1AQ96HE7 468 aa14.54□□□□□ -0.08
SEC13-216ENST00000479868 TUBGCP2Q9BSJ2 902 aa14.54□□□□□ -0.08
SEC13-216ENST00000479868 CNTNAP1P78357 1384 aa14.54□□□□□ -0.08
SEC13-216ENST00000479868 CYP3A7-CYP3A51PA0A087WV96 503 aa14.53□□□□□ -0.08
SEC13-216ENST00000479868 B4DLN1 442 aa14.53□□□□□ -0.08
SEC13-216ENST00000479868 IDEP14735 1019 aa14.53□□□□□ -0.08
SEC13-216ENST00000479868 CYP3A7P24462 503 aa14.53□□□□□ -0.08
SEC13-216ENST00000479868 ERVK-24P63145 666 aa14.53□□□□□ -0.08
SEC13-216ENST00000479868 AP3B2Q13367 1082 aa14.53□□□□□ -0.08
SEC13-216ENST00000479868 TRIM14Q14142 442 aa14.53□□□□□ -0.08
SEC13-216ENST00000479868 KIAA1755Q5JYT7 1200 aa14.53□□□□□ -0.08
SEC13-216ENST00000479868 CDAN1Q8IWY9 1227 aa14.53□□□□□ -0.08
SEC13-216ENST00000479868 PDCL2Q8N4E4 241 aa14.53□□□□□ -0.08
SEC13-216ENST00000479868 CNOT6LQ96LI5 555 aaKnown RBP14.53□□□□□ -0.08
SEC13-216ENST00000479868 NAP1L4Q99733 375 aaKnown RBP14.53□□□□□ -0.08
SEC13-216ENST00000479868 GTPBP4Q9BZE4 634 aaKnown RBP14.53□□□□□ -0.08
SEC13-216ENST00000479868 OPLAHO14841 1288 aa14.53□□□□□ -0.08
SEC13-216ENST00000479868 KRT9P35527 623 aa14.53□□□□□ -0.08
SEC13-216ENST00000479868 PPP1R2P41236 205 aa14.53□□□□□ -0.08
SEC13-216ENST00000479868 GNG11P61952 73 aa14.53□□□□□ -0.08
SEC13-216ENST00000479868 ARHGAP4P98171 946 aa14.53□□□□□ -0.08
SEC13-216ENST00000479868 CENPPQ6IPU0 288 aa14.53□□□□□ -0.08
SEC13-216ENST00000479868 BTNL9Q6UXG8 535 aa14.53□□□□□ -0.08
SEC13-216ENST00000479868 DEFB132Q7Z7B7 95 aa14.53□□□□□ -0.08
SEC13-216ENST00000479868 ACER1Q8TDN7 264 aa14.53□□□□□ -0.08
SEC13-216ENST00000479868 FAM151AQ8WW52 585 aa14.53□□□□□ -0.08
SEC13-216ENST00000479868 MBOAT7Q96N66 472 aa14.53□□□□□ -0.08
SEC13-216ENST00000479868 A0A1W2PQC6 194 aa14.52□□□□□ -0.08
SEC13-216ENST00000479868 TTC26A0AVF1 554 aa14.52□□□□□ -0.08
SEC13-216ENST00000479868 EHHADHQ08426 723 aa14.52□□□□□ -0.08
SEC13-216ENST00000479868 GRIPAP1Q4V328 841 aa14.52□□□□□ -0.08
SEC13-216ENST00000479868 HYIQ5T013 277 aa14.52□□□□□ -0.08
SEC13-216ENST00000479868 OGFOD1Q8N543 542 aa14.52□□□□□ -0.08
SEC13-216ENST00000479868 GLIS3Q8NEA6 775 aa14.52□□□□□ -0.08
SEC13-216ENST00000479868 IRX2Q9BZI1 471 aaPredicted RBP14.52□□□□□ -0.08
SEC13-216ENST00000479868 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.52□□□□□ -0.08
SEC13-216ENST00000479868 HDAC9Q9UKV0 1011 aa14.52□□□□□ -0.08
SEC13-216ENST00000479868 PRR12Q9ULL5 1215 aa14.52□□□□□ -0.08
SEC13-216ENST00000479868 E9PMD0 336 aa14.52□□□□□ -0.09
SEC13-216ENST00000479868 STAT3P40763 770 aa14.52□□□□□ -0.09
SEC13-216ENST00000479868 SPDYE2Q495Y8 402 aa14.52□□□□□ -0.09
SEC13-216ENST00000479868 DNAJC19Q96DA6 116 aa14.52□□□□□ -0.09
SEC13-216ENST00000479868 VEZTQ9HBM0 779 aa14.52□□□□□ -0.09
SEC13-216ENST00000479868 LZTFL1Q9NQ48 299 aa14.52□□□□□ -0.09
SEC13-216ENST00000479868 KIAA1024Q9UPX6 916 aa14.52□□□□□ -0.09
SEC13-216ENST00000479868 POTEB3A0JP26 581 aa14.51□□□□□ -0.09
SEC13-216ENST00000479868 POTECB2RU33 542 aa14.51□□□□□ -0.09
SEC13-216ENST00000479868 URI1O94763 535 aaPredicted RBP14.51□□□□□ -0.09
SEC13-216ENST00000479868 HOXA13P31271 388 aaPredicted RBP14.51□□□□□ -0.09
SEC13-216ENST00000479868 MMP14P50281 582 aa14.51□□□□□ -0.09
SEC13-216ENST00000479868 DNM2P50570 870 aa14.51□□□□□ -0.09
SEC13-216ENST00000479868 ELF2Q15723 593 aa14.51□□□□□ -0.09
SEC13-216ENST00000479868 PRR16Q569H4 304 aa14.51□□□□□ -0.09
SEC13-216ENST00000479868 MIIPQ5JXC2 388 aa14.51□□□□□ -0.09
SEC13-216ENST00000479868 POTEBQ6S5H4 581 aa14.51□□□□□ -0.09
SEC13-216ENST00000479868 MOXD1Q6UVY6 613 aa14.51□□□□□ -0.09
SEC13-216ENST00000479868 TMTC1Q8IUR5 882 aa14.51□□□□□ -0.09
SEC13-216ENST00000479868 ETNPPLQ8TBG4 499 aa14.51□□□□□ -0.09
SEC13-216ENST00000479868 LENG9Q96B70 501 aa14.51□□□□□ -0.09
SEC13-216ENST00000479868 TMEM39BQ9GZU3 492 aa14.51□□□□□ -0.09
SEC13-216ENST00000479868 KDM3AQ9Y4C1 1321 aa14.51□□□□□ -0.09
SEC13-216ENST00000479868 FAM86B1E9PN63 330 aa14.51□□□□□ -0.09
SEC13-216ENST00000479868 FAM86B2P0C5J1 330 aa14.51□□□□□ -0.09
SEC13-216ENST00000479868 STAT2P52630 851 aa14.51□□□□□ -0.09
SEC13-216ENST00000479868 FAM114A1Q8IWE2 563 aa14.51□□□□□ -0.09
SEC13-216ENST00000479868 GUF1Q8N442 669 aaKnown RBP14.51□□□□□ -0.09
SEC13-216ENST00000479868 ACRBPQ8NEB7 543 aa14.51□□□□□ -0.09
SEC13-216ENST00000479868 KIFC2Q96AC6 838 aa14.51□□□□□ -0.09
SEC13-216ENST00000479868 LRRC27Q9C0I9 530 aa14.51□□□□□ -0.09
SEC13-216ENST00000479868 NT5C3AQ9H0P0 336 aa14.51□□□□□ -0.09
SEC13-216ENST00000479868 ARHGEF10LQ9HCE6 1279 aa14.51□□□□□ -0.09
SEC13-216ENST00000479868 ZBTB21Q9ULJ3 1066 aa14.51□□□□□ -0.09
SEC13-216ENST00000479868 SPDYE3A6NKU9 549 aa14.5□□□□□ -0.09
SEC13-216ENST00000479868 SSBP05455 408 aaKnown RBP eCLIP14.5□□□□□ -0.09
SEC13-216ENST00000479868 CASQ1P31415 396 aa14.5□□□□□ -0.09
SEC13-216ENST00000479868 SREBF1P36956 1147 aa14.5□□□□□ -0.09
SEC13-216ENST00000479868 MTIF2P46199 727 aaKnown RBP14.5□□□□□ -0.09
SEC13-216ENST00000479868 KLK7P49862 253 aa14.5□□□□□ -0.09
SEC13-216ENST00000479868 SPIRE1Q08AE8 756 aa14.5□□□□□ -0.09
SEC13-216ENST00000479868 LRRC41Q15345 812 aa14.5□□□□□ -0.09
SEC13-216ENST00000479868 FAM83BQ5T0W9 1011 aa14.5□□□□□ -0.09
SEC13-216ENST00000479868 CYP26C1Q6V0L0 522 aa14.5□□□□□ -0.09
SEC13-216ENST00000479868 CHP1Q99653 195 aa14.5□□□□□ -0.09
SEC13-216ENST00000479868 SYNPO2Q9UMS6 1093 aa14.5□□□□□ -0.09
SEC13-216ENST00000479868 TMX2Q9Y320 296 aa14.5□□□□□ -0.09
SEC13-216ENST00000479868 RASSF10A6NK89 507 aa14.49□□□□□ -0.09
SEC13-216ENST00000479868 MED24O75448 989 aa14.49□□□□□ -0.09
SEC13-216ENST00000479868 PDE4CQ08493 712 aa14.49□□□□□ -0.09
SEC13-216ENST00000479868 TBC1D8BQ0IIM8 1120 aa14.49□□□□□ -0.09
SEC13-216ENST00000479868 COASYQ13057 564 aa14.49□□□□□ -0.09
SEC13-216ENST00000479868 Q4G0T1 1027 aa14.49□□□□□ -0.09
SEC13-216ENST00000479868 MIGA2Q7L4E1 593 aa14.49□□□□□ -0.09
SEC13-216ENST00000479868 SLFN12Q8IYM2 578 aa14.49□□□□□ -0.09
SEC13-216ENST00000479868 NOC4LQ9BVI4 516 aaKnown RBP14.49□□□□□ -0.09
SEC13-216ENST00000479868 KIF13BQ9NQT8 1826 aa14.49□□□□□ -0.09
SEC13-216ENST00000479868 FOSP01100 380 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms