RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 CCDC62Q6P9F0 684 aa18.9■□□□□ 0.62
DDX56-210ENST00000479440 PI4K2BQ8TCG2 481 aa18.9■□□□□ 0.62
DDX56-210ENST00000479440 UIMC1Q96RL1 719 aa18.9■□□□□ 0.62
DDX56-210ENST00000479440 MAF1Q9H063 256 aa18.9■□□□□ 0.62
DDX56-210ENST00000479440 INSL6Q9Y581 213 aa18.9■□□□□ 0.62
DDX56-210ENST00000479440 TET1Q8NFU7 2136 aa18.89■□□□□ 0.62
DDX56-210ENST00000479440 ARHGAP1Q07960 439 aa18.89■□□□□ 0.61
DDX56-210ENST00000479440 ZNF543Q08ER8 600 aa18.89■□□□□ 0.61
DDX56-210ENST00000479440 PTK7Q13308 1070 aa18.89■□□□□ 0.61
DDX56-210ENST00000479440 TIGD5Q53EQ6 642 aa18.89■□□□□ 0.61
DDX56-210ENST00000479440 RGS22Q8NE09 1264 aa18.89■□□□□ 0.61
DDX56-210ENST00000479440 KAT2BQ92831 832 aa18.89■□□□□ 0.61
DDX56-210ENST00000479440 TCP11L1Q9NUJ3 509 aa18.89■□□□□ 0.61
DDX56-210ENST00000479440 FAM50BQ9Y247 325 aa18.89■□□□□ 0.61
DDX56-210ENST00000479440 AMHP03971 560 aa18.88■□□□□ 0.61
DDX56-210ENST00000479440 FGRP09769 529 aa18.88■□□□□ 0.61
DDX56-210ENST00000479440 LY6KQ17RY6 165 aa18.88■□□□□ 0.61
DDX56-210ENST00000479440 USH1GQ495M9 461 aa18.88■□□□□ 0.61
DDX56-210ENST00000479440 FAM117BQ6P1L5 589 aa18.88■□□□□ 0.61
DDX56-210ENST00000479440 SEPT14Q6ZU15 432 aa18.88■□□□□ 0.61
DDX56-210ENST00000479440 CHST3Q7LGC8 479 aa18.88■□□□□ 0.61
DDX56-210ENST00000479440 MRPL38Q96DV4 380 aaKnown RBP18.88■□□□□ 0.61
DDX56-210ENST00000479440 SAMD11Q96NU1 681 aa18.88■□□□□ 0.61
DDX56-210ENST00000479440 KCNH6Q9H252 994 aa18.88■□□□□ 0.61
DDX56-210ENST00000479440 HDAC6Q9UBN7 1215 aa18.88■□□□□ 0.61
DDX56-210ENST00000479440 EMSYQ7Z589 1322 aa18.88■□□□□ 0.61
DDX56-210ENST00000479440 LGR5O75473 907 aa18.87■□□□□ 0.61
DDX56-210ENST00000479440 F2P00734 622 aa18.87■□□□□ 0.61
DDX56-210ENST00000479440 PSEN2P49810 448 aa18.87■□□□□ 0.61
DDX56-210ENST00000479440 STXBP2Q15833 593 aa18.87■□□□□ 0.61
DDX56-210ENST00000479440 TCTN1Q2MV58 587 aa18.87■□□□□ 0.61
DDX56-210ENST00000479440 GPATCH4Q5T3I0 446 aaKnown RBP18.87■□□□□ 0.61
DDX56-210ENST00000479440 MIER1Q8N108 512 aa18.87■□□□□ 0.61
DDX56-210ENST00000479440 C17orf80Q9BSJ5 609 aa18.87■□□□□ 0.61
DDX56-210ENST00000479440 ABCB11O95342 1321 aa18.86■□□□□ 0.61
DDX56-210ENST00000479440 GRXCR2A6NFK2 248 aa18.86■□□□□ 0.61
DDX56-210ENST00000479440 DCXO43602 365 aa18.86■□□□□ 0.61
DDX56-210ENST00000479440 SNHG28P0DPA3 235 aa18.86■□□□□ 0.61
DDX56-210ENST00000479440 MRE11P49959 708 aa18.86■□□□□ 0.61
DDX56-210ENST00000479440 MFSD10Q14728 455 aa18.86■□□□□ 0.61
DDX56-210ENST00000479440 ALX1Q15699 326 aa18.86■□□□□ 0.61
DDX56-210ENST00000479440 VPS53Q5VIR6 699 aa18.86■□□□□ 0.61
DDX56-210ENST00000479440 MYOCDQ8IZQ8 938 aa18.86■□□□□ 0.61
DDX56-210ENST00000479440 NSUN6Q8TEA1 469 aaKnown RBP18.86■□□□□ 0.61
DDX56-210ENST00000479440 EMID1Q96A84 441 aaPredicted RBP18.86■□□□□ 0.61
DDX56-210ENST00000479440 IWS1Q96ST2 819 aa18.86■□□□□ 0.61
DDX56-210ENST00000479440 ALG1Q9BT22 464 aa18.86■□□□□ 0.61
DDX56-210ENST00000479440 RCAN3Q9UKA8 241 aa18.86■□□□□ 0.61
DDX56-210ENST00000479440 MX1P20591 662 aa18.85■□□□□ 0.61
DDX56-210ENST00000479440 KIAA0753Q2KHM9 967 aa18.85■□□□□ 0.61
DDX56-210ENST00000479440 ZNF618Q5T7W0 954 aa18.85■□□□□ 0.61
DDX56-210ENST00000479440 MCF2L2Q86YR7 1114 aa18.85■□□□□ 0.61
DDX56-210ENST00000479440 PPTC7Q8NI37 304 aa18.85■□□□□ 0.61
DDX56-210ENST00000479440 NEK9Q8TD19 979 aa18.85■□□□□ 0.61
DDX56-210ENST00000479440 SP7Q8TDD2 431 aaPredicted RBP18.85■□□□□ 0.61
DDX56-210ENST00000479440 TTC14Q96N46 770 aa18.85■□□□□ 0.61
DDX56-210ENST00000479440 COL4A6Q14031 1691 aa18.85■□□□□ 0.61
DDX56-210ENST00000479440 ZMYM6O95789 1325 aa18.84■□□□□ 0.61
DDX56-210ENST00000479440 ZNF286BP0CG31 522 aa18.84■□□□□ 0.61
DDX56-210ENST00000479440 PCP11498 1178 aaKnown RBP18.84■□□□□ 0.61
DDX56-210ENST00000479440 HTRA4P83105 476 aaPredicted RBP18.84■□□□□ 0.61
DDX56-210ENST00000479440 CDC37Q16543 378 aaPredicted RBP18.84■□□□□ 0.61
DDX56-210ENST00000479440 TRIM71Q2Q1W2 868 aaKnown RBP18.84■□□□□ 0.61
DDX56-210ENST00000479440 C20orf194Q5TEA3 1177 aa18.84■□□□□ 0.61
DDX56-210ENST00000479440 TRAF7Q6Q0C0 670 aa18.84■□□□□ 0.61
DDX56-210ENST00000479440 DHX37Q8IY37 1157 aaKnown RBP18.84■□□□□ 0.61
DDX56-210ENST00000479440 SYTL5Q8TDW5 730 aaPredicted RBP18.84■□□□□ 0.61
DDX56-210ENST00000479440 PRKAG3Q9UGI9 489 aa18.84■□□□□ 0.61
DDX56-210ENST00000479440 MRVI1Q9Y6F6 885 aa18.84■□□□□ 0.61
DDX56-210ENST00000479440 TRIP12Q14669 1992 aaPredicted RBP18.84■□□□□ 0.61
DDX56-210ENST00000479440 H3BQ06 376 aaPredicted RBP18.83■□□□□ 0.6
DDX56-210ENST00000479440 HAS3O00219 553 aa18.83■□□□□ 0.6
DDX56-210ENST00000479440 NHLH1Q02575 133 aa18.83■□□□□ 0.6
DDX56-210ENST00000479440 LAMC2Q13753 1193 aa18.83■□□□□ 0.6
DDX56-210ENST00000479440 EPC2Q52LR7 807 aa18.83■□□□□ 0.6
DDX56-210ENST00000479440 ARHGEF16Q5VV41 709 aa18.83■□□□□ 0.6
DDX56-210ENST00000479440 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.83■□□□□ 0.6
DDX56-210ENST00000479440 BANK1Q8NDB2 785 aa18.83■□□□□ 0.6
DDX56-210ENST00000479440 PABPC5Q96DU9 382 aaKnown RBP18.83■□□□□ 0.6
DDX56-210ENST00000479440 YME1L1Q96TA2 773 aa18.83■□□□□ 0.6
DDX56-210ENST00000479440 RMDN3Q96TC7 470 aa18.83■□□□□ 0.6
DDX56-210ENST00000479440 HELLSQ9NRZ9 838 aa18.83■□□□□ 0.6
DDX56-210ENST00000479440 DDX41Q9UJV9 622 aaKnown RBP18.83■□□□□ 0.6
DDX56-210ENST00000479440 MBTPS1Q14703 1052 aa18.82■□□□□ 0.6
DDX56-210ENST00000479440 WNT8BQ93098 351 aa18.82■□□□□ 0.6
DDX56-210ENST00000479440 TAAR1Q96RJ0 339 aa18.82■□□□□ 0.6
DDX56-210ENST00000479440 NSUN3Q9H649 340 aaKnown RBP18.82■□□□□ 0.6
DDX56-210ENST00000479440 RSPH10B2B2RC85 870 aa18.81■□□□□ 0.6
DDX56-210ENST00000479440 EIF3JO75822 258 aaKnown RBP18.81■□□□□ 0.6
DDX56-210ENST00000479440 FGAP02671 866 aa18.81■□□□□ 0.6
DDX56-210ENST00000479440 RSPH10BP0C881 870 aa18.81■□□□□ 0.6
DDX56-210ENST00000479440 GOLGA8HP0CJ92 632 aa18.81■□□□□ 0.6
DDX56-210ENST00000479440 EIF2AK2P19525 551 aaKnown RBP18.81■□□□□ 0.6
DDX56-210ENST00000479440 ZP2Q05996 745 aa18.81■□□□□ 0.6
DDX56-210ENST00000479440 MKRN4PQ13434 485 aaPredicted RBP18.81■□□□□ 0.6
DDX56-210ENST00000479440 TCEAL5Q5H9L2 206 aa18.81■□□□□ 0.6
DDX56-210ENST00000479440 EP400NLQ6ZTU2 488 aa18.81■□□□□ 0.6
DDX56-210ENST00000479440 DBF4BQ8NFT6 615 aa18.81■□□□□ 0.6
DDX56-210ENST00000479440 OTUD7AQ8TE49 926 aaPredicted RBP18.81■□□□□ 0.6
DDX56-210ENST00000479440 EVI5LQ96CN4 794 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms