RNA–Protein interactions for RNA: ENST00000478440.1

ITGA4-209, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,144 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-209ENST00000478440 GMLQ99445 158 aa8.15□□□□□ -1.1
ITGA4-209ENST00000478440 CD320Q9NPF0 282 aa8.15□□□□□ -1.1
ITGA4-209ENST00000478440 PDLIM7Q9NR12 457 aa8.15□□□□□ -1.1
ITGA4-209ENST00000478440 SUSD2Q9UGT4 822 aa8.15□□□□□ -1.1
ITGA4-209ENST00000478440 EMC9Q9Y3B6 208 aa8.15□□□□□ -1.1
ITGA4-209ENST00000478440 KDM5DQ9BY66 1539 aa8.14□□□□□ -1.11
ITGA4-209ENST00000478440 TCOF1Q13428 1488 aaKnown RBP8.14□□□□□ -1.11
ITGA4-209ENST00000478440 STXBP3O00186 592 aa8.14□□□□□ -1.11
ITGA4-209ENST00000478440 EFEMP2O95967 443 aa8.14□□□□□ -1.11
ITGA4-209ENST00000478440 SRSF3P84103 164 aaKnown RBP8.14□□□□□ -1.11
ITGA4-209ENST00000478440 DPY19L1Q2PZI1 675 aa8.14□□□□□ -1.11
ITGA4-209ENST00000478440 LCE5AQ5TCM9 118 aa8.14□□□□□ -1.11
ITGA4-209ENST00000478440 TNFRSF12AQ9NP84 129 aa8.14□□□□□ -1.11
ITGA4-209ENST00000478440 IQGAP1P46940 1657 aa8.14□□□□□ -1.11
ITGA4-209ENST00000478440 WASHC2CQ9Y4E1 1318 aa8.13□□□□□ -1.11
ITGA4-209ENST00000478440 MYOCOSA0A1B0GUC4 107 aa8.13□□□□□ -1.11
ITGA4-209ENST00000478440 VAMP4O75379 141 aa8.13□□□□□ -1.11
ITGA4-209ENST00000478440 DDAH1O94760 285 aa8.13□□□□□ -1.11
ITGA4-209ENST00000478440 KRT1P04264 644 aa8.13□□□□□ -1.11
ITGA4-209ENST00000478440 PAMP19021 973 aa8.13□□□□□ -1.11
ITGA4-209ENST00000478440 HSPA1LP34931 641 aa8.13□□□□□ -1.11
ITGA4-209ENST00000478440 RAB3GAP1Q15042 981 aa8.13□□□□□ -1.11
ITGA4-209ENST00000478440 CIAPIN1Q6FI81 312 aa8.13□□□□□ -1.11
ITGA4-209ENST00000478440 CABP7Q86V35 215 aa8.13□□□□□ -1.11
ITGA4-209ENST00000478440 FAM178BQ8IXR5 827 aa8.13□□□□□ -1.11
ITGA4-209ENST00000478440 EPN3Q9H201 632 aa8.13□□□□□ -1.11
ITGA4-209ENST00000478440 KCNK12Q9HB15 430 aa8.13□□□□□ -1.11
ITGA4-209ENST00000478440 IGSF5Q9NSI5 407 aa8.13□□□□□ -1.11
ITGA4-209ENST00000478440 SMG5Q9UPR3 1016 aaKnown RBP8.13□□□□□ -1.11
ITGA4-209ENST00000478440 FAM135AQ9P2D6 1515 aa8.13□□□□□ -1.11
ITGA4-209ENST00000478440 ZNF644Q9H582 1327 aaPredicted RBP8.12□□□□□ -1.11
ITGA4-209ENST00000478440 NPIPB6E9PJ23 425 aa8.12□□□□□ -1.11
ITGA4-209ENST00000478440 RFXAPO00287 272 aa8.12□□□□□ -1.11
ITGA4-209ENST00000478440 SRGAP3O43295 1099 aa8.12□□□□□ -1.11
ITGA4-209ENST00000478440 KCNH1O95259 989 aa8.12□□□□□ -1.11
ITGA4-209ENST00000478440 ETFBP38117 255 aa8.12□□□□□ -1.11
ITGA4-209ENST00000478440 ZC3H6P61129 1189 aaKnown RBP8.12□□□□□ -1.11
ITGA4-209ENST00000478440 MVKQ03426 396 aa8.12□□□□□ -1.11
ITGA4-209ENST00000478440 CBX2Q14781 532 aaPredicted RBP8.12□□□□□ -1.11
ITGA4-209ENST00000478440 C6orf15Q6UXA7 325 aaPredicted RBP8.12□□□□□ -1.11
ITGA4-209ENST00000478440 MCF2L2Q86YR7 1114 aa8.12□□□□□ -1.11
ITGA4-209ENST00000478440 LRRC56Q8IYG6 542 aaPredicted RBP8.12□□□□□ -1.11
ITGA4-209ENST00000478440 PPP1R14AQ96A00 147 aa8.12□□□□□ -1.11
ITGA4-209ENST00000478440 ZNF408Q9H9D4 720 aa8.12□□□□□ -1.11
ITGA4-209ENST00000478440 UGGT1Q9NYU2 1555 aa8.12□□□□□ -1.11
ITGA4-209ENST00000478440 CCDC141Q6ZP82 1450 aa8.12□□□□□ -1.11
ITGA4-209ENST00000478440 SHANK2Q9UPX8 1470 aa8.12□□□□□ -1.11
ITGA4-209ENST00000478440 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.11□□□□□ -1.11
ITGA4-209ENST00000478440 NEURL4Q96JN8 1562 aa8.11□□□□□ -1.11
ITGA4-209ENST00000478440 NPHP3-ACAD11A0A0J9YXS1 232 aa8.11□□□□□ -1.11
ITGA4-209ENST00000478440 AGRPO00253 132 aa8.11□□□□□ -1.11
ITGA4-209ENST00000478440 CYBBP04839 570 aa8.11□□□□□ -1.11
ITGA4-209ENST00000478440 VIPR1P32241 457 aa8.11□□□□□ -1.11
ITGA4-209ENST00000478440 BICRALQ6AI39 1079 aa8.11□□□□□ -1.11
ITGA4-209ENST00000478440 PAQR3Q6TCH7 311 aa8.11□□□□□ -1.11
ITGA4-209ENST00000478440 EEPD1Q7L9B9 569 aa8.11□□□□□ -1.11
ITGA4-209ENST00000478440 TRIM59Q8IWR1 403 aa8.11□□□□□ -1.11
ITGA4-209ENST00000478440 THEMISQ8N1K5 641 aaPredicted RBP8.11□□□□□ -1.11
ITGA4-209ENST00000478440 ZNF513Q8N8E2 541 aaPredicted RBP8.11□□□□□ -1.11
ITGA4-209ENST00000478440 CYP26B1Q9NR63 512 aa8.11□□□□□ -1.11
ITGA4-209ENST00000478440 KLHL14Q9P2G3 628 aa8.11□□□□□ -1.11
ITGA4-209ENST00000478440 LRP2BPQ9P2M1 347 aa8.11□□□□□ -1.11
ITGA4-209ENST00000478440 APEX2Q9UBZ4 518 aa8.11□□□□□ -1.11
ITGA4-209ENST00000478440 CEP152O94986 1710 aa8.11□□□□□ -1.11
ITGA4-209ENST00000478440 PZPP20742 1482 aa8.11□□□□□ -1.11
ITGA4-209ENST00000478440 CAMSAP2Q08AD1 1489 aa8.11□□□□□ -1.11
ITGA4-209ENST00000478440 ZC3H13Q5T200 1668 aaKnown RBP8.11□□□□□ -1.11
ITGA4-209ENST00000478440 NUDT19A8MXV4 375 aa8.1□□□□□ -1.11
ITGA4-209ENST00000478440 TSPY4P0CV99 314 aa8.1□□□□□ -1.11
ITGA4-209ENST00000478440 TSPY10P0CW01 314 aa8.1□□□□□ -1.11
ITGA4-209ENST00000478440 MAPKAPK2P49137 400 aa8.1□□□□□ -1.11
ITGA4-209ENST00000478440 SV2CQ496J9 727 aa8.1□□□□□ -1.11
ITGA4-209ENST00000478440 ZNF385BQ569K4 471 aa8.1□□□□□ -1.11
ITGA4-209ENST00000478440 SIAH1Q8IUQ4 282 aa8.1□□□□□ -1.11
ITGA4-209ENST00000478440 CCDC140Q96MF4 163 aa8.1□□□□□ -1.11
ITGA4-209ENST00000478440 MCMBPQ9BTE3 642 aa8.1□□□□□ -1.11
ITGA4-209ENST00000478440 MBD1Q9UIS9 605 aaPredicted RBP8.1□□□□□ -1.11
ITGA4-209ENST00000478440 CNOT6Q9ULM6 557 aaKnown RBP8.1□□□□□ -1.11
ITGA4-209ENST00000478440 RTEL1-TNFRSF6BF6WH68 1400 aa8.1□□□□□ -1.11
ITGA4-209ENST00000478440 NPHP4O75161 1426 aaPredicted RBP8.1□□□□□ -1.11
ITGA4-209ENST00000478440 DEPDC5O75140 1603 aa8.1□□□□□ -1.11
ITGA4-209ENST00000478440 RNF17Q9BXT8 1623 aaKnown RBP8.1□□□□□ -1.11
ITGA4-209ENST00000478440 SYNMO15061 1565 aa8.1□□□□□ -1.11
ITGA4-209ENST00000478440 DHX29Q7Z478 1369 aaKnown RBP8.1□□□□□ -1.11
ITGA4-209ENST00000478440 NLRP1Q9C000 1473 aa8.09□□□□□ -1.11
ITGA4-209ENST00000478440 N4BP3O15049 544 aa8.09□□□□□ -1.11
ITGA4-209ENST00000478440 LINC00310P59036 64 aa8.09□□□□□ -1.11
ITGA4-209ENST00000478440 KIR3DS1Q14943 382 aa8.09□□□□□ -1.11
ITGA4-209ENST00000478440 IQCEQ6IPM2 695 aa8.09□□□□□ -1.11
ITGA4-209ENST00000478440 ZC3H14Q6PJT7 736 aaKnown RBP8.09□□□□□ -1.11
ITGA4-209ENST00000478440 TMEM151BQ8IW70 566 aa8.09□□□□□ -1.11
ITGA4-209ENST00000478440 SIGLEC10Q96LC7 697 aa8.09□□□□□ -1.11
ITGA4-209ENST00000478440 IRAK3Q9Y616 596 aa8.09□□□□□ -1.11
ITGA4-209ENST00000478440 SUSD5O60279 629 aa8.08□□□□□ -1.12
ITGA4-209ENST00000478440 NUAK1O60285 661 aa8.08□□□□□ -1.12
ITGA4-209ENST00000478440 NPHS1O60500 1241 aa8.08□□□□□ -1.12
ITGA4-209ENST00000478440 SDHBP21912 280 aa8.08□□□□□ -1.12
ITGA4-209ENST00000478440 CFPP27918 469 aa8.08□□□□□ -1.12
ITGA4-209ENST00000478440 GTF2IRD2BQ6EKJ0 949 aa8.08□□□□□ -1.12
ITGA4-209ENST00000478440 RPTNQ6XPR3 784 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms