RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 CFAP58Q5T655 872 aa14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 PDXDC1Q6P996 788 aa14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 CCDC91Q7Z6B0 441 aa14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 FBXO33Q7Z6M2 555 aa14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 C2CD5Q86YS7 1000 aa14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 GSPT2Q8IYD1 628 aaKnown RBP14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 ARFGAP2Q8N6H7 521 aa14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 TSG101Q99816 390 aa14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 SPZ1Q9BXG8 430 aa14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 A1CFQ9NQ94 594 aaKnown RBP14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 DOT1LQ8TEK3 1739 aa14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 STK4Q13043 487 aa14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 SPTY2D1Q68D10 685 aaPredicted RBP14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 TYW1BQ6NUM6 668 aa14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 LRIG3Q6UXM1 1119 aa14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 SV2BQ7L1I2 683 aa14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 CERS3Q8IU89 383 aa14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 IQCKQ8N0W5 287 aa14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 NCAPGQ9BPX3 1015 aa14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 C6orf50Q9HD87 102 aa14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 DUSP10Q9Y6W6 482 aa14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 RGPD3A6NKT7 1758 aaPredicted RBP14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 RGPD4Q7Z3J3 1758 aa14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 ZNF831Q5JPB2 1677 aa14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 TNRC6CQ9HCJ0 1690 aaKnown RBP14.96□□□□□ -0.01
HLA-DMA-208ENST00000477541 ESYT2A0FGR8 921 aa14.96□□□□□ -0.01
HLA-DMA-208ENST00000477541 BTNL10A8MVZ5 291 aa14.96□□□□□ -0.01
HLA-DMA-208ENST00000477541 SLC26A4O43511 780 aa14.96□□□□□ -0.01
HLA-DMA-208ENST00000477541 MOCS3O95396 460 aa14.96□□□□□ -0.01
HLA-DMA-208ENST00000477541 INF2Q27J81 1249 aa14.96□□□□□ -0.01
HLA-DMA-208ENST00000477541 TTMPQ5BVD1 217 aa14.96□□□□□ -0.01
HLA-DMA-208ENST00000477541 C10orf76Q5T2E6 689 aa14.96□□□□□ -0.01
HLA-DMA-208ENST00000477541 BARGINQ6ZT62 677 aa14.96□□□□□ -0.01
HLA-DMA-208ENST00000477541 PRPF38AQ8NAV1 312 aaKnown RBP14.96□□□□□ -0.01
HLA-DMA-208ENST00000477541 BAP1Q92560 729 aa14.96□□□□□ -0.01
HLA-DMA-208ENST00000477541 TLR10Q9BXR5 811 aa14.96□□□□□ -0.01
HLA-DMA-208ENST00000477541 RAB34Q9BZG1 259 aa14.96□□□□□ -0.01
HLA-DMA-208ENST00000477541 EPN3Q9H201 632 aa14.96□□□□□ -0.01
HLA-DMA-208ENST00000477541 CEP72Q9P209 647 aa14.96□□□□□ -0.01
HLA-DMA-208ENST00000477541 MAD2L2Q9UI95 211 aa14.96□□□□□ -0.01
HLA-DMA-208ENST00000477541 TFR2Q9UP52 801 aa14.96□□□□□ -0.01
HLA-DMA-208ENST00000477541 KIF13BQ9NQT8 1826 aa14.96□□□□□ -0.01
HLA-DMA-208ENST00000477541 NDUFAB1O14561 156 aa14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 SERPING1P05155 500 aa14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 GYG1P46976 350 aa14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 KLK7P49862 253 aa14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 TNNC1P63316 161 aa14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 TXNRD1Q16881 649 aa14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 SLC9C1Q4G0N8 1177 aa14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 NFRKBQ6P4R8 1299 aa14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 CLEC4GQ6UXB4 293 aa14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 NEK8Q86SG6 692 aa14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 ZFP91Q96JP5 570 aaPredicted RBP14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 FAM84BQ96KN1 310 aaPredicted RBP14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 SEMA6BQ9H3T3 888 aa14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 MLXIPQ9HAP2 919 aa14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 ZNF287Q9HBT7 754 aa14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 BAZ2BQ9UIF8 2168 aaKnown RBP14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 NAV1Q8NEY1 1877 aa14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 PALM3A6NDB9 673 aaPredicted RBP14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 PP2D1A8MPX8 630 aa14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 MEFVO15553 781 aaPredicted RBP14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 GNA14O95837 355 aa14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 ANXA13P27216 316 aa14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 PTGER2P43116 358 aa14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 FXR2P51116 673 aaKnown RBP eCLIP14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 MECOMQ03112 1051 aa14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 DDR1Q08345 913 aa14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 KLHDC7AQ5VTJ3 777 aa14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 PPP4R3AQ6IN85 833 aa14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 INTS5Q6P9B9 1019 aaKnown RBP14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 KIAA0895Q8NCT3 520 aa14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 ZNF384Q8TF68 577 aa14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 GPKOWQ92917 476 aaPredicted RBP eCLIP14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 RRP36Q96EU6 259 aaKnown RBP14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 GDAP1L1Q96MZ0 367 aa14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 ZIM3Q96PE6 472 aa14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 MYCBPQ99417 103 aaPredicted RBP14.95□□□□□ -0.02
HLA-DMA-208ENST00000477541 CEP350Q5VT06 3117 aa14.94□□□□□ -0.02
HLA-DMA-208ENST00000477541 LRRC53A6NM62 1247 aa14.94□□□□□ -0.02
HLA-DMA-208ENST00000477541 TMEM266Q2M3C6 531 aa14.94□□□□□ -0.02
HLA-DMA-208ENST00000477541 FAM47AQ5JRC9 791 aa14.94□□□□□ -0.02
HLA-DMA-208ENST00000477541 C12orf60Q5U649 245 aa14.94□□□□□ -0.02
HLA-DMA-208ENST00000477541 KRT26Q7Z3Y9 468 aa14.94□□□□□ -0.02
HLA-DMA-208ENST00000477541 TSEN2Q8NCE0 465 aaKnown RBP14.94□□□□□ -0.02
HLA-DMA-208ENST00000477541 HDAC7Q8WUI4 952 aa14.94□□□□□ -0.02
HLA-DMA-208ENST00000477541 CEP63Q96MT8 703 aa14.94□□□□□ -0.02
HLA-DMA-208ENST00000477541 ANKRD2Q9GZV1 360 aa14.94□□□□□ -0.02
HLA-DMA-208ENST00000477541 PLEKHA4Q9H4M7 779 aa14.94□□□□□ -0.02
HLA-DMA-208ENST00000477541 NIP7Q9Y221 180 aaKnown RBP eCLIP14.94□□□□□ -0.02
HLA-DMA-208ENST00000477541 PCDHGC5Q9Y5F6 944 aa14.94□□□□□ -0.02
HLA-DMA-208ENST00000477541 SMIM22K7EJ46 135 aa14.93□□□□□ -0.02
HLA-DMA-208ENST00000477541 NMT2O60551 498 aa14.93□□□□□ -0.02
HLA-DMA-208ENST00000477541 HSPA9P38646 679 aaKnown RBP14.93□□□□□ -0.02
HLA-DMA-208ENST00000477541 TFAP4Q01664 338 aa14.93□□□□□ -0.02
HLA-DMA-208ENST00000477541 CUL1Q13616 776 aa14.93□□□□□ -0.02
HLA-DMA-208ENST00000477541 PDIA5Q14554 519 aa14.93□□□□□ -0.02
HLA-DMA-208ENST00000477541 NAB2Q15742 525 aa14.93□□□□□ -0.02
HLA-DMA-208ENST00000477541 IFI16Q16666 785 aaKnown RBP14.93□□□□□ -0.02
HLA-DMA-208ENST00000477541 RRAGAQ7L523 313 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms