RNA–Protein interactions for RNA: ENST00000476961.5

CNTNAP3B-205, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 2,643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-205ENST00000476961 SRP68Q9UHB9 627 aaKnown RBP9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 NARFQ9UHQ1 456 aa9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 BCORQ6W2J9 1755 aa9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 N4BP3O15049 544 aa9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 VARSP26640 1264 aaKnown RBP9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 STAT6P42226 847 aa9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 HALP42357 657 aa9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 CD97P48960 835 aa9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 PDE1AP54750 535 aa9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 TXNRD1Q16881 649 aa9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 SH2D4BQ5SQS7 431 aa9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 NEPROQ6NW34 567 aa9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 SYT2Q8N9I0 419 aaPredicted RBP9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 WDR66Q8TBY9 1149 aa9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 CTAGE1Q96RT6 745 aa9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 NAP1L3Q99457 506 aaPredicted RBP9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 RABEP2Q9H5N1 569 aa9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 AS3MTQ9HBK9 375 aa9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 KIAA1522Q9P206 1035 aaPredicted RBP9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 NIP7Q9Y221 180 aaKnown RBP eCLIP9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 IRS4O14654 1257 aaPredicted RBP9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 LGR5O75473 907 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 B3GALNT1O75752 331 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 CSF1RP07333 972 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 ERCC5P28715 1186 aaPredicted RBP9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 CLK1P49759 484 aaKnown RBP9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 POLE2P56282 527 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 GNGT1P63211 74 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 SULT2A1Q06520 285 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 ADAM9Q13443 819 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 LBRQ14739 615 aaKnown RBP9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 SGSM1Q2NKQ1 1148 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 RNF187Q5TA31 235 aaPredicted RBP9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 TTC22Q5TAA0 569 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 USPL1Q5W0Q7 1092 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 KAZNQ674X7 775 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 GDAP1Q8TB36 358 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 RNF25Q96BH1 459 aaPredicted RBP9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 MAELQ96JY0 434 aaKnown RBP9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 PNKPQ96T60 521 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 MPHOSPH8Q99549 860 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 BPIFA3Q9BQP9 254 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 GOLPH3LQ9H4A5 285 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 OSBPL3Q9H4L5 887 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 ABCF3Q9NUQ8 709 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 NOP53Q9NZM5 478 aaKnown RBP9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 WWC3Q9ULE0 1092 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 ZNF652Q9Y2D9 606 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 CHMP3Q9Y3E7 222 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 IQCA1LA6NCM1 817 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 OPLAHO14841 1288 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 PLSCR1O15162 318 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 RGL2O15211 777 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 FOXD2O60548 495 aaPredicted RBP9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 MTA2O94776 668 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 RPL17P18621 184 aaKnown RBP9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 TUFMP49411 452 aaKnown RBP9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 USP46P62068 366 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 RASA2Q15283 850 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 ANO6Q4KMQ2 910 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 TSHZ3Q63HK5 1081 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 SAMD14Q8IZD0 417 aaPredicted RBP9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 LRRC43Q8N309 656 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 ARHGAP18Q8N392 663 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 LRRC45Q96CN5 670 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 DDX27Q96GQ7 796 aaKnown RBP9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 L3MBTL3Q96JM7 780 aaPredicted RBP9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 MUC3BQ9H195 1237 aa9.13□□□□□ -0.95
CNTNAP3B-205ENST00000476961 SCN7AQ01118 1682 aa9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 NTSR2O95665 410 aa9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 APBA3O96018 575 aa9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 ALDH2P05091 517 aa9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 TUBA1BP68363 451 aa9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 WASHC5Q12768 1159 aa9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 TBC1D9BQ66K14 1250 aa9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 TUBA1AQ71U36 451 aa9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 ZNF554Q86TJ5 538 aa9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 IL17RAQ96F46 866 aa9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 CCT7Q99832 543 aa9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 SH3GL2Q99962 352 aa9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 EIF2AQ9BY44 585 aaKnown RBP9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 OSBPL5Q9H0X9 879 aaPredicted RBP9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 SUCLA2Q9P2R7 463 aaPredicted RBP9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 ZNF180Q9UJW8 692 aa9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 A6NNZ2 444 aa9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 FAM25EA8MYX2 175 aa9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 SGTAO43765 313 aa9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 KLC1Q07866 573 aa9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 IMMTQ16891 758 aaKnown RBP9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 TUBB8Q3ZCM7 444 aa9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 TRAPPC3LQ5T215 181 aa9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 ZCCHC8Q6NZY4 707 aaKnown RBP9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 C6orf89Q6UWU4 347 aa9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 CEP128Q6ZU80 1094 aa9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 DAAM2Q86T65 1068 aa9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 CNBD1Q8NA66 436 aa9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 TTLL11Q8NHH1 800 aa9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 ZNF594Q96JF6 807 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms