RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 MMP19Q99542 508 aa5.37□□□□□ -1.55
VPS13D-207ENST00000476169 TTC1Q99614 292 aa5.37□□□□□ -1.55
VPS13D-207ENST00000476169 ZNF180Q9UJW8 692 aa5.37□□□□□ -1.55
VPS13D-207ENST00000476169 PNMA2Q9UL42 364 aa5.37□□□□□ -1.55
VPS13D-207ENST00000476169 E2F8A0AVK6 867 aa5.36□□□□□ -1.55
VPS13D-207ENST00000476169 M0R2C6 588 aa5.36□□□□□ -1.55
VPS13D-207ENST00000476169 GSC2O15499 205 aa5.36□□□□□ -1.55
VPS13D-207ENST00000476169 FGF10O15520 208 aaPredicted RBP5.36□□□□□ -1.55
VPS13D-207ENST00000476169 GPR39O43194 453 aa5.36□□□□□ -1.55
VPS13D-207ENST00000476169 MYO1BO43795 1136 aa5.36□□□□□ -1.55
VPS13D-207ENST00000476169 GLRX3O76003 335 aaKnown RBP5.36□□□□□ -1.55
VPS13D-207ENST00000476169 SRGAP2CP0DJJ0 459 aa5.36□□□□□ -1.55
VPS13D-207ENST00000476169 KCNA6P17658 529 aa5.36□□□□□ -1.55
VPS13D-207ENST00000476169 LAPTM5Q13571 262 aa5.36□□□□□ -1.55
VPS13D-207ENST00000476169 SART3Q15020 963 aaKnown RBP5.36□□□□□ -1.55
VPS13D-207ENST00000476169 CPSF6Q16630 551 aaKnown RBP eCLIP5.36□□□□□ -1.55
VPS13D-207ENST00000476169 KIZQ2M2Z5 673 aa5.36□□□□□ -1.55
VPS13D-207ENST00000476169 SKOR2Q2VWA4 1001 aaPredicted RBP5.36□□□□□ -1.55
VPS13D-207ENST00000476169 LONRF3Q496Y0 759 aa5.36□□□□□ -1.55
VPS13D-207ENST00000476169 KIF18BQ86Y91 864 aa5.36□□□□□ -1.55
VPS13D-207ENST00000476169 CREG2Q8IUH2 290 aa5.36□□□□□ -1.55
VPS13D-207ENST00000476169 CHMP4CQ96CF2 233 aa5.36□□□□□ -1.55
VPS13D-207ENST00000476169 ARPC5LQ9BPX5 153 aa5.36□□□□□ -1.55
VPS13D-207ENST00000476169 IFT22Q9H7X7 185 aa5.36□□□□□ -1.55
VPS13D-207ENST00000476169 CHST12Q9NRB3 414 aa5.36□□□□□ -1.55
VPS13D-207ENST00000476169 BSDC1Q9NW68 430 aaPredicted RBP5.36□□□□□ -1.55
VPS13D-207ENST00000476169 TERF2IPQ9NYB0 399 aa5.36□□□□□ -1.55
VPS13D-207ENST00000476169 PLAGL2Q9UPG8 496 aa5.36□□□□□ -1.55
VPS13D-207ENST00000476169 PCDHA11Q9Y5I1 949 aa5.36□□□□□ -1.55
VPS13D-207ENST00000476169 CBX4O00257 560 aa5.35□□□□□ -1.55
VPS13D-207ENST00000476169 NEMP1O14524 444 aa5.35□□□□□ -1.55
VPS13D-207ENST00000476169 ZEB2O60315 1214 aa5.35□□□□□ -1.55
VPS13D-207ENST00000476169 IGLV1-40P01703 118 aa5.35□□□□□ -1.55
VPS13D-207ENST00000476169 IFIT2P09913 472 aaKnown RBP5.35□□□□□ -1.55
VPS13D-207ENST00000476169 IFI16Q16666 785 aaKnown RBP5.35□□□□□ -1.55
VPS13D-207ENST00000476169 INF2Q27J81 1249 aa5.35□□□□□ -1.55
VPS13D-207ENST00000476169 GFOD2Q3B7J2 385 aa5.35□□□□□ -1.55
VPS13D-207ENST00000476169 FAM47CQ5HY64 1035 aa5.35□□□□□ -1.55
VPS13D-207ENST00000476169 TMPRSS7Q7RTY8 843 aa5.35□□□□□ -1.55
VPS13D-207ENST00000476169 SPATS2Q86XZ4 545 aaKnown RBP5.35□□□□□ -1.55
VPS13D-207ENST00000476169 CPNE8Q86YQ8 564 aa5.35□□□□□ -1.55
VPS13D-207ENST00000476169 PLD6Q8N2A8 252 aaKnown RBP5.35□□□□□ -1.55
VPS13D-207ENST00000476169 PCDH19Q8TAB3 1148 aa5.35□□□□□ -1.55
VPS13D-207ENST00000476169 ORAI3Q9BRQ5 295 aa5.35□□□□□ -1.55
VPS13D-207ENST00000476169 CDH19Q9H159 772 aa5.35□□□□□ -1.55
VPS13D-207ENST00000476169 CABP5Q9NP86 173 aa5.35□□□□□ -1.55
VPS13D-207ENST00000476169 TPSG1Q9NRR2 321 aa5.35□□□□□ -1.55
VPS13D-207ENST00000476169 SEMA3GQ9NS98 782 aa5.35□□□□□ -1.55
VPS13D-207ENST00000476169 TRHDEQ9UKU6 1024 aa5.35□□□□□ -1.55
VPS13D-207ENST00000476169 APOBEC2Q9Y235 224 aaKnown RBP5.35□□□□□ -1.55
VPS13D-207ENST00000476169 COQ6Q9Y2Z9 468 aa5.35□□□□□ -1.55
VPS13D-207ENST00000476169 PCDHA2Q9Y5H9 948 aa5.35□□□□□ -1.55
VPS13D-207ENST00000476169 PHLDB1Q86UU1 1377 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 PITPNM2Q9BZ72 1349 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 TMEM265A0A087WTH1 108 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 ZNF891A8MT65 544 aaPredicted RBP5.34□□□□□ -1.55
VPS13D-207ENST00000476169 NPHP1O15259 732 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 CYP26A1O43174 497 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 GAS7O60861 476 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 TBC1D8O95759 1140 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 SOD2P04179 222 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 CKMP06732 381 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 NBPF7P0C2Y1 421 aaPredicted RBP5.34□□□□□ -1.55
VPS13D-207ENST00000476169 BPIP17213 487 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 FSTP19883 344 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 RPL10P27635 214 aaKnown RBP5.34□□□□□ -1.55
VPS13D-207ENST00000476169 ID4P47928 161 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 DNM2P50570 870 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 IL2P60568 153 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 EGR3Q06889 387 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 VPS72Q15906 364 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 TMEM177Q53S58 311 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 C10orf62Q5T681 223 aaPredicted RBP5.34□□□□□ -1.55
VPS13D-207ENST00000476169 FAM102BQ5T8I3 360 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 MBLAC2Q68D91 279 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 CYP2R1Q6VVX0 501 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 ZPBP2Q6X784 338 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 WAPLQ7Z5K2 1190 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 NXPE1Q8N323 547 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 NETO1Q8TDF5 533 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 PNISRQ8TF01 805 aaKnown RBP5.34□□□□□ -1.55
VPS13D-207ENST00000476169 COG1Q8WTW3 980 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 FBXW5Q969U6 566 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 CHAMP1Q96JM3 812 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 NAP1L4Q99733 375 aaKnown RBP5.34□□□□□ -1.55
VPS13D-207ENST00000476169 RTFDC1Q9BY42 306 aaPredicted RBP5.34□□□□□ -1.55
VPS13D-207ENST00000476169 IPPKQ9H8X2 491 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 ATP13A1Q9HD20 1204 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 INTUQ9ULD6 942 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 ZKSCAN5Q9Y2L8 839 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 SNX11Q9Y5W9 270 aa5.34□□□□□ -1.55
VPS13D-207ENST00000476169 TMEM82A0PJX8 343 aa5.33□□□□□ -1.56
VPS13D-207ENST00000476169 CCDC66A2RUB6 948 aa5.33□□□□□ -1.56
VPS13D-207ENST00000476169 FAM47E-STBD1D6RA91 191 aa5.33□□□□□ -1.56
VPS13D-207ENST00000476169 IFRD1O00458 451 aaPredicted RBP5.33□□□□□ -1.56
VPS13D-207ENST00000476169 GSTA4O15217 222 aa5.33□□□□□ -1.56
VPS13D-207ENST00000476169 F2P00734 622 aa5.33□□□□□ -1.56
VPS13D-207ENST00000476169 PYGMP11217 842 aa5.33□□□□□ -1.56
VPS13D-207ENST00000476169 GRK2P25098 689 aa5.33□□□□□ -1.56
VPS13D-207ENST00000476169 GRK3P35626 688 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms