RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 PVALEFA0A1B0GWK0 134 aa9.95□□□□□ -0.82
CCDC66-216ENST00000476142 EFCAB8A8MWE9 144 aa9.95□□□□□ -0.82
CCDC66-216ENST00000476142 E9PMD0 336 aa9.95□□□□□ -0.82
CCDC66-216ENST00000476142 FKBP1AP62942 108 aaKnown RBP9.95□□□□□ -0.82
CCDC66-216ENST00000476142 JAG1P78504 1218 aa9.95□□□□□ -0.82
CCDC66-216ENST00000476142 TMEM119Q4V9L6 283 aa9.95□□□□□ -0.82
CCDC66-216ENST00000476142 PRR16Q569H4 304 aa9.95□□□□□ -0.82
CCDC66-216ENST00000476142 GPIHBP1Q8IV16 184 aa9.95□□□□□ -0.82
CCDC66-216ENST00000476142 MKL1Q969V6 931 aa9.95□□□□□ -0.82
CCDC66-216ENST00000476142 MRIQ9BWK5 157 aa9.95□□□□□ -0.82
CCDC66-216ENST00000476142 GTPBP4Q9BZE4 634 aaKnown RBP9.95□□□□□ -0.82
CCDC66-216ENST00000476142 AGPAT5Q9NUQ2 364 aa9.95□□□□□ -0.82
CCDC66-216ENST00000476142 ZNHIT6Q9NWK9 470 aaKnown RBP9.95□□□□□ -0.82
CCDC66-216ENST00000476142 OGFRQ9NZT2 677 aa9.95□□□□□ -0.82
CCDC66-216ENST00000476142 CAPN11Q9UMQ6 739 aa9.95□□□□□ -0.82
CCDC66-216ENST00000476142 GUCA1BQ9UMX6 200 aa9.95□□□□□ -0.82
CCDC66-216ENST00000476142 EPN1Q9Y6I3 576 aaPredicted RBP9.95□□□□□ -0.82
CCDC66-216ENST00000476142 POTEB3A0JP26 581 aa9.95□□□□□ -0.82
CCDC66-216ENST00000476142 CTAGE9A4FU28 777 aa9.95□□□□□ -0.82
CCDC66-216ENST00000476142 POTECB2RU33 542 aa9.95□□□□□ -0.82
CCDC66-216ENST00000476142 NDUFA10O95299 355 aa9.95□□□□□ -0.82
CCDC66-216ENST00000476142 KRT18P05783 430 aaKnown RBP9.95□□□□□ -0.82
CCDC66-216ENST00000476142 FECHP22830 423 aa9.95□□□□□ -0.82
CCDC66-216ENST00000476142 SYDE2Q5VT97 1194 aa9.95□□□□□ -0.82
CCDC66-216ENST00000476142 TATDN1Q6P1N9 297 aa9.95□□□□□ -0.82
CCDC66-216ENST00000476142 POTEBQ6S5H4 581 aa9.95□□□□□ -0.82
CCDC66-216ENST00000476142 FBXO11Q86XK2 927 aa9.95□□□□□ -0.82
CCDC66-216ENST00000476142 UBE2Q2Q8WVN8 375 aa9.95□□□□□ -0.82
CCDC66-216ENST00000476142 AMNQ9BXJ7 453 aa9.95□□□□□ -0.82
CCDC66-216ENST00000476142 LRRC27Q9C0I9 530 aa9.95□□□□□ -0.82
CCDC66-216ENST00000476142 GLT8D2Q9H1C3 349 aa9.95□□□□□ -0.82
CCDC66-216ENST00000476142 BMP2KQ9NSY1 1161 aaPredicted RBP9.95□□□□□ -0.82
CCDC66-216ENST00000476142 TRIM10Q9UDY6 481 aa9.95□□□□□ -0.82
CCDC66-216ENST00000476142 PUF60Q9UHX1 559 aaKnown RBP9.95□□□□□ -0.82
CCDC66-216ENST00000476142 NPHP3-ACAD11A0A0J9YXS1 232 aa9.94□□□□□ -0.82
CCDC66-216ENST00000476142 SPDYE3A6NKU9 549 aa9.94□□□□□ -0.82
CCDC66-216ENST00000476142 RAD17O75943 681 aa9.94□□□□□ -0.82
CCDC66-216ENST00000476142 BMP3P12645 472 aa9.94□□□□□ -0.82
CCDC66-216ENST00000476142 RXRBP28702 533 aa9.94□□□□□ -0.82
CCDC66-216ENST00000476142 HOXA13P31271 388 aaPredicted RBP9.94□□□□□ -0.82
CCDC66-216ENST00000476142 CLCN6P51797 869 aa9.94□□□□□ -0.82
CCDC66-216ENST00000476142 MIIPQ5JXC2 388 aa9.94□□□□□ -0.82
CCDC66-216ENST00000476142 CC2D2BQ6DHV5 1058 aa9.94□□□□□ -0.82
CCDC66-216ENST00000476142 CENPPQ6IPU0 288 aa9.94□□□□□ -0.82
CCDC66-216ENST00000476142 DNAJC7Q99615 494 aa9.94□□□□□ -0.82
CCDC66-216ENST00000476142 NAP1L4Q99733 375 aaKnown RBP9.94□□□□□ -0.82
CCDC66-216ENST00000476142 TSG101Q99816 390 aa9.94□□□□□ -0.82
CCDC66-216ENST00000476142 TANGO6Q9C0B7 1094 aa9.94□□□□□ -0.82
CCDC66-216ENST00000476142 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.94□□□□□ -0.82
CCDC66-216ENST00000476142 PANK4Q9NVE7 773 aa9.94□□□□□ -0.82
CCDC66-216ENST00000476142 ARGLU1Q9NWB6 273 aaPredicted RBP9.94□□□□□ -0.82
CCDC66-216ENST00000476142 TMOD2Q9NZR1 351 aa9.94□□□□□ -0.82
CCDC66-216ENST00000476142 DDX41Q9UJV9 622 aaKnown RBP9.94□□□□□ -0.82
CCDC66-216ENST00000476142 TFR2Q9UP52 801 aa9.94□□□□□ -0.82
CCDC66-216ENST00000476142 C10orf71Q711Q0 1435 aa9.94□□□□□ -0.82
CCDC66-216ENST00000476142 YDJCA8MPS7 323 aa9.94□□□□□ -0.82
CCDC66-216ENST00000476142 ARHGAP4P98171 946 aa9.94□□□□□ -0.82
CCDC66-216ENST00000476142 COASYQ13057 564 aa9.94□□□□□ -0.82
CCDC66-216ENST00000476142 RRP1BQ14684 758 aaKnown RBP9.94□□□□□ -0.82
CCDC66-216ENST00000476142 NCAPH2Q6IBW4 605 aa9.94□□□□□ -0.82
CCDC66-216ENST00000476142 KIAA1328Q86T90 577 aa9.94□□□□□ -0.82
CCDC66-216ENST00000476142 GPBP1Q86WP2 473 aa9.94□□□□□ -0.82
CCDC66-216ENST00000476142 FAM207AQ9NSI2 230 aaPredicted RBP9.94□□□□□ -0.82
CCDC66-216ENST00000476142 SLX4Q8IY92 1834 aa9.93□□□□□ -0.82
CCDC66-216ENST00000476142 KDM3AQ9Y4C1 1321 aa9.93□□□□□ -0.82
CCDC66-216ENST00000476142 MEIS2O14770 477 aa9.93□□□□□ -0.82
CCDC66-216ENST00000476142 PLA2G4BP0C869 781 aa9.93□□□□□ -0.82
CCDC66-216ENST00000476142 H2AFXP16104 143 aaPredicted RBP9.93□□□□□ -0.82
CCDC66-216ENST00000476142 ARHGAP25P42331 645 aa9.93□□□□□ -0.82
CCDC66-216ENST00000476142 EN1Q05925 392 aaPredicted RBP9.93□□□□□ -0.82
CCDC66-216ENST00000476142 EZH2Q15910 746 aaKnown RBP9.93□□□□□ -0.82
CCDC66-216ENST00000476142 WDR59Q6PJI9 974 aa9.93□□□□□ -0.82
CCDC66-216ENST00000476142 NELFCDQ8IXH7 590 aa9.93□□□□□ -0.82
CCDC66-216ENST00000476142 MYOCDQ8IZQ8 938 aa9.93□□□□□ -0.82
CCDC66-216ENST00000476142 GUF1Q8N442 669 aaKnown RBP9.93□□□□□ -0.82
CCDC66-216ENST00000476142 NUP58Q9BVL2 599 aa9.93□□□□□ -0.82
CCDC66-216ENST00000476142 NT5C3AQ9H0P0 336 aa9.93□□□□□ -0.82
CCDC66-216ENST00000476142 MMRN2Q9H8L6 949 aa9.93□□□□□ -0.82
CCDC66-216ENST00000476142 ZNF446Q9NWS9 450 aa9.93□□□□□ -0.82
CCDC66-216ENST00000476142 MYH4Q9Y623 1939 aa9.93□□□□□ -0.82
CCDC66-216ENST00000476142 POTEFA5A3E0 1075 aa9.93□□□□□ -0.82
CCDC66-216ENST00000476142 MEIS1O00470 390 aa9.93□□□□□ -0.82
CCDC66-216ENST00000476142 IPO7O95373 1038 aaKnown RBP9.93□□□□□ -0.82
CCDC66-216ENST00000476142 FGFR1OPO95684 399 aaKnown RBP9.93□□□□□ -0.82
CCDC66-216ENST00000476142 TFRCP02786 760 aaKnown RBP9.93□□□□□ -0.82
CCDC66-216ENST00000476142 POTEIP0CG38 1075 aa9.93□□□□□ -0.82
CCDC66-216ENST00000476142 ZNF76P36508 570 aa9.93□□□□□ -0.82
CCDC66-216ENST00000476142 USP11P51784 963 aa9.93□□□□□ -0.82
CCDC66-216ENST00000476142 SLC15A2Q16348 729 aa9.93□□□□□ -0.82
CCDC66-216ENST00000476142 VWA3BQ502W6 1294 aa9.93□□□□□ -0.82
CCDC66-216ENST00000476142 FAM26FQ5R3K3 315 aa9.93□□□□□ -0.82
CCDC66-216ENST00000476142 POTEGQ6S5H5 508 aa9.93□□□□□ -0.82
CCDC66-216ENST00000476142 POTEEQ6S8J3 1075 aa9.93□□□□□ -0.82
CCDC66-216ENST00000476142 GMCL1P1Q8NEA9 526 aa9.93□□□□□ -0.82
CCDC66-216ENST00000476142 C7orf43Q8WVR3 580 aa9.93□□□□□ -0.82
CCDC66-216ENST00000476142 GOLGA1Q92805 767 aa9.93□□□□□ -0.82
CCDC66-216ENST00000476142 P2RX7Q99572 595 aaKnown RBP9.93□□□□□ -0.82
CCDC66-216ENST00000476142 NAPGQ99747 312 aaPredicted RBP9.93□□□□□ -0.82
CCDC66-216ENST00000476142 VEZTQ9HBM0 779 aa9.93□□□□□ -0.82
CCDC66-216ENST00000476142 STK32BQ9NY57 414 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms