RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 MAP3K9P80192 1104 aa18.57■□□□□ 0.56
TVP23B-202ENST00000476139 SEMA3FQ13275 785 aa18.57■□□□□ 0.56
TVP23B-202ENST00000476139 UNC13DQ70J99 1090 aa18.57■□□□□ 0.56
TVP23B-202ENST00000476139 SLF1Q9BQI6 1058 aa18.57■□□□□ 0.56
TVP23B-202ENST00000476139 CLRN2A0PK11 232 aa18.57■□□□□ 0.56
TVP23B-202ENST00000476139 BICDL2A1A5D9 508 aa18.57■□□□□ 0.56
TVP23B-202ENST00000476139 TBC1D8BQ0IIM8 1120 aa18.57■□□□□ 0.56
TVP23B-202ENST00000476139 STAT3P40763 770 aa18.56■□□□□ 0.56
TVP23B-202ENST00000476139 PPP2R3AQ06190 1150 aa18.56■□□□□ 0.56
TVP23B-202ENST00000476139 MIIPQ5JXC2 388 aa18.56■□□□□ 0.56
TVP23B-202ENST00000476139 UTP14CQ5TAP6 766 aaKnown RBP18.56■□□□□ 0.56
TVP23B-202ENST00000476139 CENPPQ6IPU0 288 aa18.56■□□□□ 0.56
TVP23B-202ENST00000476139 CYP26C1Q6V0L0 522 aa18.56■□□□□ 0.56
TVP23B-202ENST00000476139 AEBP2Q6ZN18 517 aaPredicted RBP18.56■□□□□ 0.56
TVP23B-202ENST00000476139 ANO3Q9BYT9 981 aa18.56■□□□□ 0.56
TVP23B-202ENST00000476139 LUC7L2Q9Y383 392 aaKnown RBP18.56■□□□□ 0.56
TVP23B-202ENST00000476139 FHOD1Q9Y613 1164 aa18.56■□□□□ 0.56
TVP23B-202ENST00000476139 E9PMD0 336 aa18.56■□□□□ 0.56
TVP23B-202ENST00000476139 RAD17O75943 681 aa18.56■□□□□ 0.56
TVP23B-202ENST00000476139 SSBP05455 408 aaKnown RBP eCLIP18.56■□□□□ 0.56
TVP23B-202ENST00000476139 ECE1P42892 770 aa18.56■□□□□ 0.56
TVP23B-202ENST00000476139 TMEM119Q4V9L6 283 aa18.56■□□□□ 0.56
TVP23B-202ENST00000476139 PUF60Q9UHX1 559 aaKnown RBP18.56■□□□□ 0.56
TVP23B-202ENST00000476139 C10orf71Q711Q0 1435 aa18.56■□□□□ 0.56
TVP23B-202ENST00000476139 MYH7BA7E2Y1 1941 aa18.55■□□□□ 0.56
TVP23B-202ENST00000476139 MTIF2P46199 727 aaKnown RBP18.55■□□□□ 0.56
TVP23B-202ENST00000476139 DNM2P50570 870 aa18.55■□□□□ 0.56
TVP23B-202ENST00000476139 TRIM14Q14142 442 aa18.55■□□□□ 0.56
TVP23B-202ENST00000476139 WDR59Q6PJI9 974 aa18.55■□□□□ 0.56
TVP23B-202ENST00000476139 NOC4LQ9BVI4 516 aaKnown RBP18.55■□□□□ 0.56
TVP23B-202ENST00000476139 KIAA1024Q9UPX6 916 aa18.55■□□□□ 0.56
TVP23B-202ENST00000476139 ZBTB12Q9Y330 459 aaPredicted RBP18.55■□□□□ 0.56
TVP23B-202ENST00000476139 A0A1W2PQC6 194 aa18.55■□□□□ 0.56
TVP23B-202ENST00000476139 RAD51AP2Q09MP3 1159 aa18.55■□□□□ 0.56
TVP23B-202ENST00000476139 ZNF569Q5MCW4 686 aa18.55■□□□□ 0.56
TVP23B-202ENST00000476139 RBM26Q5T8P6 1007 aaKnown RBP18.55■□□□□ 0.56
TVP23B-202ENST00000476139 OR8K1Q8NGG5 319 aa18.55■□□□□ 0.56
TVP23B-202ENST00000476139 TFR2Q9UP52 801 aa18.55■□□□□ 0.56
TVP23B-202ENST00000476139 MRFAP1Q9Y605 127 aa18.55■□□□□ 0.56
TVP23B-202ENST00000476139 PVALEFA0A1B0GWK0 134 aa18.54■□□□□ 0.56
TVP23B-202ENST00000476139 CACNB1Q02641 598 aaPredicted RBP18.54■□□□□ 0.56
TVP23B-202ENST00000476139 TMCO3Q6UWJ1 677 aa18.54■□□□□ 0.56
TVP23B-202ENST00000476139 TBC1D7Q9P0N9 293 aa18.54■□□□□ 0.56
TVP23B-202ENST00000476139 CAPN11Q9UMQ6 739 aa18.54■□□□□ 0.56
TVP23B-202ENST00000476139 NPHP3-ACAD11A0A0J9YXS1 232 aa18.54■□□□□ 0.56
TVP23B-202ENST00000476139 EFCAB8A8MWE9 144 aa18.54■□□□□ 0.56
TVP23B-202ENST00000476139 NPM3O75607 178 aaKnown RBP18.54■□□□□ 0.56
TVP23B-202ENST00000476139 PNMA6AP0CW24 399 aaPredicted RBP18.54■□□□□ 0.56
TVP23B-202ENST00000476139 TRIM21P19474 475 aaKnown RBP18.54■□□□□ 0.56
TVP23B-202ENST00000476139 HOXA13P31271 388 aaPredicted RBP18.54■□□□□ 0.56
TVP23B-202ENST00000476139 BMS1Q14692 1282 aaKnown RBP18.54■□□□□ 0.56
TVP23B-202ENST00000476139 CC2D2BQ6DHV5 1058 aa18.54■□□□□ 0.56
TVP23B-202ENST00000476139 NOC3LQ8WTT2 800 aaKnown RBP18.54■□□□□ 0.56
TVP23B-202ENST00000476139 DNAJC19Q96DA6 116 aa18.54■□□□□ 0.56
TVP23B-202ENST00000476139 AMNQ9BXJ7 453 aa18.54■□□□□ 0.56
TVP23B-202ENST00000476139 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.54■□□□□ 0.56
TVP23B-202ENST00000476139 POTEB3A0JP26 581 aa18.54■□□□□ 0.56
TVP23B-202ENST00000476139 POTECB2RU33 542 aa18.54■□□□□ 0.56
TVP23B-202ENST00000476139 GCFC2P16383 781 aaKnown RBP18.54■□□□□ 0.56
TVP23B-202ENST00000476139 PRR16Q569H4 304 aa18.54■□□□□ 0.56
TVP23B-202ENST00000476139 KIAA1755Q5JYT7 1200 aa18.54■□□□□ 0.56
TVP23B-202ENST00000476139 POTEBQ6S5H4 581 aa18.54■□□□□ 0.56
TVP23B-202ENST00000476139 CDAN1Q8IWY9 1227 aa18.54■□□□□ 0.56
TVP23B-202ENST00000476139 FGFBP2Q9BYJ0 223 aa18.54■□□□□ 0.56
TVP23B-202ENST00000476139 TRIM10Q9UDY6 481 aa18.54■□□□□ 0.56
TVP23B-202ENST00000476139 REXO2Q9Y3B8 237 aaKnown RBP18.54■□□□□ 0.56
TVP23B-202ENST00000476139 GMCL1P1Q8NEA9 526 aa18.53■□□□□ 0.56
TVP23B-202ENST00000476139 DNAJC7Q99615 494 aa18.53■□□□□ 0.56
TVP23B-202ENST00000476139 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.53■□□□□ 0.56
TVP23B-202ENST00000476139 KCNMB3Q9NPA1 279 aa18.53■□□□□ 0.56
TVP23B-202ENST00000476139 EPN1Q9Y6I3 576 aaPredicted RBP18.53■□□□□ 0.56
TVP23B-202ENST00000476139 KIF5CO60282 957 aa18.53■□□□□ 0.56
TVP23B-202ENST00000476139 ENTPD3O75355 529 aa18.53■□□□□ 0.56
TVP23B-202ENST00000476139 USP11P51784 963 aa18.53■□□□□ 0.56
TVP23B-202ENST00000476139 ARHGAP4P98171 946 aa18.53■□□□□ 0.56
TVP23B-202ENST00000476139 FBXO11Q86XK2 927 aa18.53■□□□□ 0.56
TVP23B-202ENST00000476139 CYP2W1Q8TAV3 490 aa18.53■□□□□ 0.56
TVP23B-202ENST00000476139 PCMTD1Q96MG8 357 aaPredicted RBP18.53■□□□□ 0.56
TVP23B-202ENST00000476139 BMP3P12645 472 aa18.52■□□□□ 0.56
TVP23B-202ENST00000476139 ARHGAP25P42331 645 aa18.52■□□□□ 0.56
TVP23B-202ENST00000476139 EHHADHQ08426 723 aa18.52■□□□□ 0.56
TVP23B-202ENST00000476139 COBLL1Q53SF7 1204 aa18.52■□□□□ 0.56
TVP23B-202ENST00000476139 ACER1Q8TDN7 264 aa18.52■□□□□ 0.56
TVP23B-202ENST00000476139 GMCL1Q96IK5 515 aa18.52■□□□□ 0.56
TVP23B-202ENST00000476139 TTYH3Q9C0H2 523 aa18.52■□□□□ 0.56
TVP23B-202ENST00000476139 ZNF277Q9NRM2 450 aaPredicted RBP18.52■□□□□ 0.56
TVP23B-202ENST00000476139 FAM86B1E9PN63 330 aa18.52■□□□□ 0.56
TVP23B-202ENST00000476139 OPLAHO14841 1288 aa18.52■□□□□ 0.56
TVP23B-202ENST00000476139 POLR3GO15318 223 aaPredicted RBP18.52■□□□□ 0.56
TVP23B-202ENST00000476139 NDUFA10O95299 355 aa18.52■□□□□ 0.56
TVP23B-202ENST00000476139 FAM86B2P0C5J1 330 aa18.52■□□□□ 0.56
TVP23B-202ENST00000476139 SYDE2Q5VT97 1194 aa18.52■□□□□ 0.56
TVP23B-202ENST00000476139 CRYGNQ8WXF5 182 aa18.52■□□□□ 0.56
TVP23B-202ENST00000476139 ATRNL1Q5VV63 1379 aa18.52■□□□□ 0.55
TVP23B-202ENST00000476139 MED24O75448 989 aa18.51■□□□□ 0.55
TVP23B-202ENST00000476139 PLA2G4AP47712 749 aa18.51■□□□□ 0.55
TVP23B-202ENST00000476139 TERF2Q15554 542 aa18.51■□□□□ 0.55
TVP23B-202ENST00000476139 CAMKK2Q96RR4 588 aa18.51■□□□□ 0.55
TVP23B-202ENST00000476139 FAM53CQ9NYF3 392 aa18.51■□□□□ 0.55
TVP23B-202ENST00000476139 PSMD14O00487 310 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms