RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 IGSF22Q8N9C0 903 aa7.72□□□□□ -1.17
UBR4-212ENST00000475973 DAGLBQ8NCG7 672 aa7.72□□□□□ -1.17
UBR4-212ENST00000475973 MNS1Q8NEH6 495 aa7.72□□□□□ -1.17
UBR4-212ENST00000475973 EPSTI1Q96J88 318 aa7.72□□□□□ -1.17
UBR4-212ENST00000475973 CABP5Q9NP86 173 aa7.72□□□□□ -1.17
UBR4-212ENST00000475973 SH3GLB2Q9NR46 395 aa7.72□□□□□ -1.17
UBR4-212ENST00000475973 SAGE1Q9NXZ1 904 aa7.72□□□□□ -1.17
UBR4-212ENST00000475973 ASTN2O75129 1339 aaPredicted RBP7.72□□□□□ -1.17
UBR4-212ENST00000475973 TNKSO95271 1327 aa7.72□□□□□ -1.17
UBR4-212ENST00000475973 SOWAHDA6NJG2 315 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 CLSTN1O94985 981 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 OAS2P29728 719 aaKnown RBP7.71□□□□□ -1.18
UBR4-212ENST00000475973 HOXA7P31268 230 aaPredicted RBP7.71□□□□□ -1.18
UBR4-212ENST00000475973 KRT2P35908 639 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 LONP1P36776 959 aaKnown RBP7.71□□□□□ -1.18
UBR4-212ENST00000475973 NOVP48745 357 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 COPB1P53618 953 aaKnown RBP7.71□□□□□ -1.18
UBR4-212ENST00000475973 CHMP4BP1P59074 171 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 FKBP1AP62942 108 aaKnown RBP7.71□□□□□ -1.18
UBR4-212ENST00000475973 KRT31Q15323 416 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 DLGAP5Q15398 846 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 SPECC1Q5M775 1068 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 ZNF658Q5TYW1 1059 aaPredicted RBP7.71□□□□□ -1.18
UBR4-212ENST00000475973 WDR59Q6PJI9 974 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 POTEEQ6S8J3 1075 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 NFXL1Q6ZNB6 911 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 ARMC9Q7Z3E5 817 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 FBXO33Q7Z6M2 555 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 TXNRD3Q86VQ6 643 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 RASAL3Q86YV0 1011 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 TRMT44Q8IYL2 757 aaKnown RBP7.71□□□□□ -1.18
UBR4-212ENST00000475973 GRAMD1CQ8IYS0 662 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 RUBCNQ92622 972 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 ESR2Q92731 530 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 SYMPKQ92797 1274 aaKnown RBP7.71□□□□□ -1.18
UBR4-212ENST00000475973 CCDC34Q96HJ3 373 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 ZSCAN10Q96SZ4 725 aaPredicted RBP7.71□□□□□ -1.18
UBR4-212ENST00000475973 PNKPQ96T60 521 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 MXD3Q9BW11 206 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 IRX2Q9BZI1 471 aaPredicted RBP7.71□□□□□ -1.18
UBR4-212ENST00000475973 CCSER1Q9C0I3 900 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 EPC1Q9H2F5 836 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 ABHD10Q9NUJ1 306 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 KBTBD4Q9NVX7 518 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 ADAM21Q9UKJ8 722 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 CAPN11Q9UMQ6 739 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 PPP2R3BQ9Y5P8 575 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 SLC4A4Q9Y6R1 1079 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 SYNRGQ9UMZ2 1314 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 ROBO3Q96MS0 1386 aa7.71□□□□□ -1.18
UBR4-212ENST00000475973 PAPPA2Q9BXP8 1791 aa7.7□□□□□ -1.18
UBR4-212ENST00000475973 A0A0U1RQJ8 604 aa7.7□□□□□ -1.18
UBR4-212ENST00000475973 TARSL2A2RTX5 802 aaKnown RBP7.7□□□□□ -1.18
UBR4-212ENST00000475973 FAM205CA6NFA0 338 aa7.7□□□□□ -1.18
UBR4-212ENST00000475973 WTIPA6NIX2 430 aaPredicted RBP7.7□□□□□ -1.18
UBR4-212ENST00000475973 FAM155AB1AL88 458 aaPredicted RBP7.7□□□□□ -1.18
UBR4-212ENST00000475973 KIF5CO60282 957 aa7.7□□□□□ -1.18
UBR4-212ENST00000475973 PRPF6O94906 941 aaKnown RBP7.7□□□□□ -1.18
UBR4-212ENST00000475973 RHOBTB3O94955 611 aa7.7□□□□□ -1.18
UBR4-212ENST00000475973 LCA5LO95447 670 aa7.7□□□□□ -1.18
UBR4-212ENST00000475973 IL1R1P14778 569 aa7.7□□□□□ -1.18
UBR4-212ENST00000475973 XBP1P17861 261 aa7.7□□□□□ -1.18
UBR4-212ENST00000475973 EEF1GP26641 437 aaKnown RBP7.7□□□□□ -1.18
UBR4-212ENST00000475973 CASP14P31944 242 aa7.7□□□□□ -1.18
UBR4-212ENST00000475973 BCAMP50895 628 aa7.7□□□□□ -1.18
UBR4-212ENST00000475973 PFKFB3Q16875 520 aaPredicted RBP7.7□□□□□ -1.18
UBR4-212ENST00000475973 NBPF9Q3BBW0 867 aa7.7□□□□□ -1.18
UBR4-212ENST00000475973 TCP11X2Q5H9J9 407 aa7.7□□□□□ -1.18
UBR4-212ENST00000475973 TTC38Q5R3I4 469 aa7.7□□□□□ -1.18
UBR4-212ENST00000475973 TEX35Q5T0J7 233 aa7.7□□□□□ -1.18
UBR4-212ENST00000475973 SWT1Q5T5J6 900 aaKnown RBP7.7□□□□□ -1.18
UBR4-212ENST00000475973 RCSD1Q6JBY9 416 aa7.7□□□□□ -1.18
UBR4-212ENST00000475973 CNNM4Q6P4Q7 775 aa7.7□□□□□ -1.18
UBR4-212ENST00000475973 DLK2Q6UY11 383 aa7.7□□□□□ -1.18
UBR4-212ENST00000475973 CYP26C1Q6V0L0 522 aa7.7□□□□□ -1.18
UBR4-212ENST00000475973 ZSCAN29Q8IWY8 852 aaPredicted RBP7.7□□□□□ -1.18
UBR4-212ENST00000475973 SRBD1Q8N5C6 995 aaKnown RBP7.7□□□□□ -1.18
UBR4-212ENST00000475973 MTMR14Q8NCE2 650 aa7.7□□□□□ -1.18
UBR4-212ENST00000475973 HELBQ8NG08 1087 aaPredicted RBP7.7□□□□□ -1.18
UBR4-212ENST00000475973 ATRIPQ8WXE1 791 aa7.7□□□□□ -1.18
UBR4-212ENST00000475973 ABHD8Q96I13 439 aa7.7□□□□□ -1.18
UBR4-212ENST00000475973 RPGRIP1Q96KN7 1286 aa7.7□□□□□ -1.18
UBR4-212ENST00000475973 DESI2Q9BSY9 194 aa7.7□□□□□ -1.18
UBR4-212ENST00000475973 TSPYL1Q9H0U9 437 aa7.7□□□□□ -1.18
UBR4-212ENST00000475973 TCP11L1Q9NUJ3 509 aa7.7□□□□□ -1.18
UBR4-212ENST00000475973 PCNTO95613 3336 aa7.69□□□□□ -1.18
UBR4-212ENST00000475973 LGALS16A8MUM7 142 aa7.69□□□□□ -1.18
UBR4-212ENST00000475973 F8W031 263 aaPredicted RBP7.69□□□□□ -1.18
UBR4-212ENST00000475973 HOXA2O43364 376 aa7.69□□□□□ -1.18
UBR4-212ENST00000475973 PLEKHA8P1O95397 391 aa7.69□□□□□ -1.18
UBR4-212ENST00000475973 ABL1P00519 1130 aa7.69□□□□□ -1.18
UBR4-212ENST00000475973 APPP05067 770 aa7.69□□□□□ -1.18
UBR4-212ENST00000475973 PRLRP16471 622 aa7.69□□□□□ -1.18
UBR4-212ENST00000475973 CDK11BP21127 795 aaKnown RBP7.69□□□□□ -1.18
UBR4-212ENST00000475973 HIBADHP31937 336 aaKnown RBP7.69□□□□□ -1.18
UBR4-212ENST00000475973 PRPHP41219 470 aa7.69□□□□□ -1.18
UBR4-212ENST00000475973 RBM5P52756 815 aaKnown RBP eCLIP7.69□□□□□ -1.18
UBR4-212ENST00000475973 SREBF2Q12772 1141 aa7.69□□□□□ -1.18
UBR4-212ENST00000475973 GNL2Q13823 731 aaKnown RBP7.69□□□□□ -1.18
UBR4-212ENST00000475973 TNFAIP1Q13829 316 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms