RNA–Protein interactions for RNA: ENST00000475491.1

KCNIP3-206, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best)

Gene KCNIP3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-206ENST00000475491 ECM29Q5VYK3 1845 aa12.79□□□□□ -0.36
KCNIP3-206ENST00000475491 MUM1L1Q5H9M0 696 aa12.79□□□□□ -0.36
KCNIP3-206ENST00000475491 IKZF4Q9H2S9 585 aa12.79□□□□□ -0.36
KCNIP3-206ENST00000475491 GPRC5DQ9NZD1 345 aa12.79□□□□□ -0.36
KCNIP3-206ENST00000475491 M0R2N6 131 aa12.78□□□□□ -0.36
KCNIP3-206ENST00000475491 NKRFO15226 690 aaKnown RBP eCLIP12.78□□□□□ -0.36
KCNIP3-206ENST00000475491 PSMC6P62333 389 aa12.78□□□□□ -0.36
KCNIP3-206ENST00000475491 NAALADL2Q58DX5 795 aa12.78□□□□□ -0.36
KCNIP3-206ENST00000475491 GADL1Q6ZQY3 521 aa12.78□□□□□ -0.36
KCNIP3-206ENST00000475491 MED15Q96RN5 788 aa12.78□□□□□ -0.36
KCNIP3-206ENST00000475491 R3HDMLQ9H3Y0 253 aa12.78□□□□□ -0.36
KCNIP3-206ENST00000475491 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.78□□□□□ -0.36
KCNIP3-206ENST00000475491 DISC1Q9NRI5 854 aa12.78□□□□□ -0.36
KCNIP3-206ENST00000475491 TMX2Q9Y320 296 aa12.78□□□□□ -0.36
KCNIP3-206ENST00000475491 PDE4DQ08499 809 aa12.78□□□□□ -0.36
KCNIP3-206ENST00000475491 PTPN14Q15678 1187 aa12.78□□□□□ -0.36
KCNIP3-206ENST00000475491 TPH2Q8IWU9 490 aa12.78□□□□□ -0.36
KCNIP3-206ENST00000475491 IL31RAQ8NI17 732 aa12.78□□□□□ -0.36
KCNIP3-206ENST00000475491 RIC8AQ9NPQ8 531 aa12.78□□□□□ -0.36
KCNIP3-206ENST00000475491 BCCIPQ9P287 314 aaKnown RBP eCLIP12.78□□□□□ -0.36
KCNIP3-206ENST00000475491 MKI67P46013 3256 aaKnown RBP12.78□□□□□ -0.36
KCNIP3-206ENST00000475491 TNFAIP1Q13829 316 aa12.78□□□□□ -0.36
KCNIP3-206ENST00000475491 SULF1Q8IWU6 871 aa12.78□□□□□ -0.36
KCNIP3-206ENST00000475491 CCAR2Q8N163 923 aaKnown RBP12.78□□□□□ -0.36
KCNIP3-206ENST00000475491 TAB2Q9NYJ8 693 aa12.78□□□□□ -0.36
KCNIP3-206ENST00000475491 FZD9O00144 591 aa12.77□□□□□ -0.36
KCNIP3-206ENST00000475491 OPLAHO14841 1288 aa12.77□□□□□ -0.36
KCNIP3-206ENST00000475491 VCAM1P19320 739 aa12.77□□□□□ -0.36
KCNIP3-206ENST00000475491 PMS1P54277 932 aaKnown RBP12.77□□□□□ -0.36
KCNIP3-206ENST00000475491 MDM2Q00987 491 aaPredicted RBP12.77□□□□□ -0.36
KCNIP3-206ENST00000475491 DCAF4Q8WV16 495 aa12.77□□□□□ -0.36
KCNIP3-206ENST00000475491 MRFAP1L1Q96HT8 127 aa12.77□□□□□ -0.36
KCNIP3-206ENST00000475491 CDK5RAP2Q96SN8 1893 aa12.77□□□□□ -0.36
KCNIP3-206ENST00000475491 TESPA1A2RU30 521 aaPredicted RBP12.77□□□□□ -0.37
KCNIP3-206ENST00000475491 ENOX2Q16206 610 aaKnown RBP12.77□□□□□ -0.37
KCNIP3-206ENST00000475491 SYT10Q6XYQ8 523 aa12.77□□□□□ -0.37
KCNIP3-206ENST00000475491 ZNF710Q8N1W2 664 aa12.77□□□□□ -0.37
KCNIP3-206ENST00000475491 HAS1Q92839 578 aa12.77□□□□□ -0.37
KCNIP3-206ENST00000475491 HSD3B7Q9H2F3 369 aa12.77□□□□□ -0.37
KCNIP3-206ENST00000475491 SH3GLB2Q9NR46 395 aa12.77□□□□□ -0.37
KCNIP3-206ENST00000475491 OGFRQ9NZT2 677 aa12.77□□□□□ -0.37
KCNIP3-206ENST00000475491 NID2Q14112 1375 aa12.77□□□□□ -0.37
KCNIP3-206ENST00000475491 CAVIN2O95810 425 aa12.77□□□□□ -0.37
KCNIP3-206ENST00000475491 RPN1P04843 607 aaKnown RBP12.77□□□□□ -0.37
KCNIP3-206ENST00000475491 TMEM266Q2M3C6 531 aa12.77□□□□□ -0.37
KCNIP3-206ENST00000475491 KMT5BQ4FZB7 885 aa12.77□□□□□ -0.37
KCNIP3-206ENST00000475491 KSR1Q8IVT5 923 aa12.77□□□□□ -0.37
KCNIP3-206ENST00000475491 CALML4Q96GE6 196 aa12.77□□□□□ -0.37
KCNIP3-206ENST00000475491 ZSWIM4Q9H7M6 989 aa12.77□□□□□ -0.37
KCNIP3-206ENST00000475491 LTBP1Q14766 1721 aa12.77□□□□□ -0.37
KCNIP3-206ENST00000475491 PRCPP42785 496 aa12.76□□□□□ -0.37
KCNIP3-206ENST00000475491 KRT79Q5XKE5 535 aa12.76□□□□□ -0.37
KCNIP3-206ENST00000475491 EMILIN3Q9NT22 766 aa12.76□□□□□ -0.37
KCNIP3-206ENST00000475491 LAMA2P24043 3122 aaKnown RBP12.76□□□□□ -0.37
KCNIP3-206ENST00000475491 LOC102724159A0A0B4J2E5 919 aa12.76□□□□□ -0.37
KCNIP3-206ENST00000475491 PHF20L1A8MW92 1017 aa12.76□□□□□ -0.37
KCNIP3-206ENST00000475491 STK4Q13043 487 aa12.76□□□□□ -0.37
KCNIP3-206ENST00000475491 PWP2Q15269 919 aaKnown RBP12.76□□□□□ -0.37
KCNIP3-206ENST00000475491 CEP135Q66GS9 1140 aa12.76□□□□□ -0.37
KCNIP3-206ENST00000475491 DCPSQ96C86 337 aaKnown RBP12.76□□□□□ -0.37
KCNIP3-206ENST00000475491 PCMTD1Q96MG8 357 aaPredicted RBP12.76□□□□□ -0.37
KCNIP3-206ENST00000475491 MMTAG2Q9BU76 263 aaKnown RBP12.76□□□□□ -0.37
KCNIP3-206ENST00000475491 MRIQ9BWK5 157 aa12.76□□□□□ -0.37
KCNIP3-206ENST00000475491 COL20A1Q9P218 1284 aa12.76□□□□□ -0.37
KCNIP3-206ENST00000475491 TUBE1Q9UJT0 475 aa12.76□□□□□ -0.37
KCNIP3-206ENST00000475491 TELO2Q9Y4R8 837 aa12.76□□□□□ -0.37
KCNIP3-206ENST00000475491 POLR2AP24928 1970 aaKnown RBP12.76□□□□□ -0.37
KCNIP3-206ENST00000475491 ARP10275 920 aa12.76□□□□□ -0.37
KCNIP3-206ENST00000475491 FKBP1AP62942 108 aaKnown RBP12.76□□□□□ -0.37
KCNIP3-206ENST00000475491 MTF1Q14872 753 aa12.76□□□□□ -0.37
KCNIP3-206ENST00000475491 CCDC34Q96HJ3 373 aa12.76□□□□□ -0.37
KCNIP3-206ENST00000475491 CCZ1BP86790 482 aa12.75□□□□□ -0.37
KCNIP3-206ENST00000475491 CCZ1P86791 482 aaPredicted RBP12.75□□□□□ -0.37
KCNIP3-206ENST00000475491 NELFBQ8WX92 580 aa12.75□□□□□ -0.37
KCNIP3-206ENST00000475491 GCOM1H8Y6P7 765 aaPredicted RBP12.75□□□□□ -0.37
KCNIP3-206ENST00000475491 POLR2MP0CAP2 368 aa12.75□□□□□ -0.37
KCNIP3-206ENST00000475491 GABPB1Q06547 395 aaPredicted RBP12.75□□□□□ -0.37
KCNIP3-206ENST00000475491 PDXDC2PQ6P474 469 aa12.75□□□□□ -0.37
KCNIP3-206ENST00000475491 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.75□□□□□ -0.37
KCNIP3-206ENST00000475491 BANK1Q8NDB2 785 aa12.75□□□□□ -0.37
KCNIP3-206ENST00000475491 PPP1R13LQ8WUF5 828 aa12.75□□□□□ -0.37
KCNIP3-206ENST00000475491 CHURC1Q8WUH1 139 aa12.75□□□□□ -0.37
KCNIP3-206ENST00000475491 MKL1Q969V6 931 aa12.75□□□□□ -0.37
KCNIP3-206ENST00000475491 FGFBP2Q9BYJ0 223 aa12.75□□□□□ -0.37
KCNIP3-206ENST00000475491 MMRN2Q9H8L6 949 aa12.75□□□□□ -0.37
KCNIP3-206ENST00000475491 LRRC37AA6NMS7 1700 aa12.75□□□□□ -0.37
KCNIP3-206ENST00000475491 N4BP3O15049 544 aa12.75□□□□□ -0.37
KCNIP3-206ENST00000475491 TPM3P06753 285 aa12.75□□□□□ -0.37
KCNIP3-206ENST00000475491 GRIPAP1Q4V328 841 aa12.75□□□□□ -0.37
KCNIP3-206ENST00000475491 TMED8Q6PL24 325 aaPredicted RBP12.75□□□□□ -0.37
KCNIP3-206ENST00000475491 CCDC112Q8NEF3 446 aa12.75□□□□□ -0.37
KCNIP3-206ENST00000475491 TRIM47Q96LD4 638 aa12.75□□□□□ -0.37
KCNIP3-206ENST00000475491 TAAR1Q96RJ0 339 aa12.75□□□□□ -0.37
KCNIP3-206ENST00000475491 WDR11Q9BZH6 1224 aa12.75□□□□□ -0.37
KCNIP3-206ENST00000475491 LZTFL1Q9NQ48 299 aa12.75□□□□□ -0.37
KCNIP3-206ENST00000475491 RSPH14Q9UHP6 348 aa12.75□□□□□ -0.37
KCNIP3-206ENST00000475491 DNAI1Q9UI46 699 aa12.75□□□□□ -0.37
KCNIP3-206ENST00000475491 SYNRGQ9UMZ2 1314 aa12.75□□□□□ -0.37
KCNIP3-206ENST00000475491 MYMKA6NI61 221 aa12.74□□□□□ -0.37
KCNIP3-206ENST00000475491 EML1O00423 815 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms