RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 GJB5O95377 273 aa23.68■■□□□ 1.38
APP-215ENST00000474136 PDHBP11177 359 aa23.68■■□□□ 1.38
APP-215ENST00000474136 ERVK-21P61565 698 aa23.68■■□□□ 1.38
APP-215ENST00000474136 LY6KQ17RY6 165 aa23.68■■□□□ 1.38
APP-215ENST00000474136 RRP12Q5JTH9 1297 aaKnown RBP23.68■■□□□ 1.38
APP-215ENST00000474136 SESTD1Q86VW0 696 aa23.68■■□□□ 1.38
APP-215ENST00000474136 TGS1Q96RS0 853 aaKnown RBP23.68■■□□□ 1.38
APP-215ENST00000474136 RAD9AQ99638 391 aa23.68■■□□□ 1.38
APP-215ENST00000474136 CXCL10P02778 98 aa23.67■■□□□ 1.38
APP-215ENST00000474136 FGRP09769 529 aa23.67■■□□□ 1.38
APP-215ENST00000474136 KCNA5P22460 613 aa23.67■■□□□ 1.38
APP-215ENST00000474136 ARHGAP1Q07960 439 aa23.67■■□□□ 1.38
APP-215ENST00000474136 CHST3Q7LGC8 479 aa23.67■■□□□ 1.38
APP-215ENST00000474136 ALYREFQ86V81 257 aaKnown RBP23.67■■□□□ 1.38
APP-215ENST00000474136 FAM178BQ8IXR5 827 aa23.67■■□□□ 1.38
APP-215ENST00000474136 GJD3Q8N144 294 aa23.67■■□□□ 1.38
APP-215ENST00000474136 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.67■■□□□ 1.38
APP-215ENST00000474136 CKBP12277 381 aa23.66■■□□□ 1.38
APP-215ENST00000474136 IL9P15248 144 aa23.66■■□□□ 1.38
APP-215ENST00000474136 USH1GQ495M9 461 aa23.66■■□□□ 1.38
APP-215ENST00000474136 SEPT14Q6ZU15 432 aa23.66■■□□□ 1.38
APP-215ENST00000474136 TBC1D5Q92609 795 aa23.66■■□□□ 1.38
APP-215ENST00000474136 HDAC6Q9UBN7 1215 aa23.66■■□□□ 1.38
APP-215ENST00000474136 WDR19Q8NEZ3 1342 aa23.66■■□□□ 1.38
APP-215ENST00000474136 ABHD14A-ACY1A0A1B0GW23 586 aa23.65■■□□□ 1.38
APP-215ENST00000474136 GH1P01241 217 aa23.65■■□□□ 1.38
APP-215ENST00000474136 RBL2Q08999 1139 aa23.65■■□□□ 1.38
APP-215ENST00000474136 ZNF543Q08ER8 600 aa23.65■■□□□ 1.38
APP-215ENST00000474136 LEXMQ3ZCV2 418 aa23.65■■□□□ 1.38
APP-215ENST00000474136 CPVLQ9H3G5 476 aa23.65■■□□□ 1.38
APP-215ENST00000474136 GTF2IRD1Q9UHL9 959 aa23.65■■□□□ 1.38
APP-215ENST00000474136 TRAF7Q6Q0C0 670 aa23.64■■□□□ 1.38
APP-215ENST00000474136 WNT8BQ93098 351 aa23.64■■□□□ 1.38
APP-215ENST00000474136 ALG1Q9BT22 464 aa23.64■■□□□ 1.38
APP-215ENST00000474136 TCP11L1Q9NUJ3 509 aa23.64■■□□□ 1.38
APP-215ENST00000474136 PNMA2Q9UL42 364 aa23.64■■□□□ 1.38
APP-215ENST00000474136 PRR33A8MZF0 331 aa23.63■■□□□ 1.37
APP-215ENST00000474136 B4DLN1 442 aa23.63■■□□□ 1.37
APP-215ENST00000474136 SSTR3P32745 418 aaPredicted RBP23.63■■□□□ 1.37
APP-215ENST00000474136 MRPL12P52815 198 aaKnown RBP23.63■■□□□ 1.37
APP-215ENST00000474136 MBTPS1Q14703 1052 aa23.63■■□□□ 1.37
APP-215ENST00000474136 TAAR1Q96RJ0 339 aa23.63■■□□□ 1.37
APP-215ENST00000474136 C17orf80Q9BSJ5 609 aa23.63■■□□□ 1.37
APP-215ENST00000474136 COL20A1Q9P218 1284 aa23.63■■□□□ 1.37
APP-215ENST00000474136 PARNO95453 639 aaKnown RBP23.62■■□□□ 1.37
APP-215ENST00000474136 GOLGA8HP0CJ92 632 aa23.62■■□□□ 1.37
APP-215ENST00000474136 CASTP20810 708 aaKnown RBP23.62■■□□□ 1.37
APP-215ENST00000474136 ZNF200P98182 395 aaPredicted RBP23.62■■□□□ 1.37
APP-215ENST00000474136 IKBKEQ14164 716 aa23.62■■□□□ 1.37
APP-215ENST00000474136 ALX1Q15699 326 aa23.62■■□□□ 1.37
APP-215ENST00000474136 TRIM71Q2Q1W2 868 aaKnown RBP23.62■■□□□ 1.37
APP-215ENST00000474136 ZNF618Q5T7W0 954 aa23.62■■□□□ 1.37
APP-215ENST00000474136 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.62■■□□□ 1.37
APP-215ENST00000474136 UBA5Q9GZZ9 404 aa23.62■■□□□ 1.37
APP-215ENST00000474136 FGAP02671 866 aa23.61■■□□□ 1.37
APP-215ENST00000474136 SNHG28P0DPA3 235 aa23.61■■□□□ 1.37
APP-215ENST00000474136 PSEN2P49810 448 aa23.61■■□□□ 1.37
APP-215ENST00000474136 PTCRAQ6ISU1 281 aaPredicted RBP23.61■■□□□ 1.37
APP-215ENST00000474136 C7orf31Q8N865 590 aa23.61■■□□□ 1.37
APP-215ENST00000474136 RGS22Q8NE09 1264 aa23.61■■□□□ 1.37
APP-215ENST00000474136 FBXO22Q8NEZ5 403 aa23.61■■□□□ 1.37
APP-215ENST00000474136 SYTL5Q8TDW5 730 aaPredicted RBP23.61■■□□□ 1.37
APP-215ENST00000474136 UIMC1Q96RL1 719 aa23.61■■□□□ 1.37
APP-215ENST00000474136 ZNF286BP0CG31 522 aa23.6■■□□□ 1.37
APP-215ENST00000474136 MX1P20591 662 aa23.6■■□□□ 1.37
APP-215ENST00000474136 PDE4AP27815 886 aa23.6■■□□□ 1.37
APP-215ENST00000474136 HAND2P61296 217 aa23.6■■□□□ 1.37
APP-215ENST00000474136 DGKDQ16760 1214 aa23.6■■□□□ 1.37
APP-215ENST00000474136 OSBPL3Q9H4L5 887 aa23.6■■□□□ 1.37
APP-215ENST00000474136 PTK7Q13308 1070 aa23.59■■□□□ 1.37
APP-215ENST00000474136 HIC1Q14526 733 aa23.59■■□□□ 1.37
APP-215ENST00000474136 MFSD10Q14728 455 aa23.59■■□□□ 1.37
APP-215ENST00000474136 PLEKHM2Q8IWE5 1019 aa23.59■■□□□ 1.37
APP-215ENST00000474136 GRXCR2A6NFK2 248 aa23.59■■□□□ 1.37
APP-215ENST00000474136 H3BQ06 376 aaPredicted RBP23.59■■□□□ 1.37
APP-215ENST00000474136 EFCAB14O75071 495 aa23.59■■□□□ 1.37
APP-215ENST00000474136 STXBP2Q15833 593 aa23.59■■□□□ 1.37
APP-215ENST00000474136 KIAA0753Q2KHM9 967 aa23.59■■□□□ 1.37
APP-215ENST00000474136 NSUN6Q8TEA1 469 aaKnown RBP23.59■■□□□ 1.37
APP-215ENST00000474136 FAM227BQ96M60 508 aa23.59■■□□□ 1.37
APP-215ENST00000474136 DDX41Q9UJV9 622 aaKnown RBP23.59■■□□□ 1.37
APP-215ENST00000474136 INSL6Q9Y581 213 aa23.59■■□□□ 1.37
APP-215ENST00000474136 HAS3O00219 553 aa23.58■■□□□ 1.36
APP-215ENST00000474136 LGR5O75473 907 aa23.58■■□□□ 1.36
APP-215ENST00000474136 PDE1AP54750 535 aa23.58■■□□□ 1.36
APP-215ENST00000474136 MYOCDQ8IZQ8 938 aa23.58■■□□□ 1.36
APP-215ENST00000474136 TTC14Q96N46 770 aa23.58■■□□□ 1.36
APP-215ENST00000474136 RMDN3Q96TC7 470 aa23.58■■□□□ 1.36
APP-215ENST00000474136 HELLSQ9NRZ9 838 aa23.58■■□□□ 1.36
APP-215ENST00000474136 SIP14410 1827 aa23.57■■□□□ 1.36
APP-215ENST00000474136 A0A0D9SFI3 127 aa23.57■■□□□ 1.36
APP-215ENST00000474136 F2P00734 622 aa23.57■■□□□ 1.36
APP-215ENST00000474136 MKRN4PQ13434 485 aaPredicted RBP23.57■■□□□ 1.36
APP-215ENST00000474136 CDC37Q16543 378 aaPredicted RBP23.57■■□□□ 1.36
APP-215ENST00000474136 DBF4BQ8NFT6 615 aa23.57■■□□□ 1.36
APP-215ENST00000474136 NEK9Q8TD19 979 aa23.57■■□□□ 1.36
APP-215ENST00000474136 MRPL38Q96DV4 380 aaKnown RBP23.57■■□□□ 1.36
APP-215ENST00000474136 ZKSCAN3Q9BRR0 538 aa23.57■■□□□ 1.36
APP-215ENST00000474136 KATNAL1Q9BW62 490 aa23.57■■□□□ 1.36
APP-215ENST00000474136 SALL3Q9BXA9 1300 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms