RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 PPIGQ13427 754 aaKnown RBP eCLIP20.88■□□□□ 0.935e-6■■□□□ 14.2
SNX4-204ENST00000473417 ZNF697Q5TEC3 545 aa20.88■□□□□ 0.93
SNX4-204ENST00000473417 CMTR1Q8N1G2 835 aaKnown RBP20.88■□□□□ 0.93
SNX4-204ENST00000473417 PIBF1Q8WXW3 757 aa20.88■□□□□ 0.93
SNX4-204ENST00000473417 TAAR1Q96RJ0 339 aa20.88■□□□□ 0.93
SNX4-204ENST00000473417 PIGSQ96S52 555 aa20.88■□□□□ 0.93
SNX4-204ENST00000473417 AMNQ9BXJ7 453 aa20.88■□□□□ 0.93
SNX4-204ENST00000473417 PPP1R12CQ9BZL4 782 aa20.88■□□□□ 0.93
SNX4-204ENST00000473417 ZBTB5O15062 677 aa20.87■□□□□ 0.93
SNX4-204ENST00000473417 PPP1R11O60927 126 aaPredicted RBP20.87■□□□□ 0.93
SNX4-204ENST00000473417 ARIH2O95376 493 aa20.87■□□□□ 0.93
SNX4-204ENST00000473417 GNAQP50148 359 aa20.87■□□□□ 0.93
SNX4-204ENST00000473417 ANAPC15P60006 121 aa20.87■□□□□ 0.93
SNX4-204ENST00000473417 TMEM199Q8N511 208 aa20.87■□□□□ 0.93
SNX4-204ENST00000473417 NSUN6Q8TEA1 469 aaKnown RBP20.87■□□□□ 0.93
SNX4-204ENST00000473417 GUCD1Q96NT3 240 aa20.87■□□□□ 0.93
SNX4-204ENST00000473417 IWS1Q96ST2 819 aa20.87■□□□□ 0.93
SNX4-204ENST00000473417 RMDN3Q96TC7 470 aa20.87■□□□□ 0.93
SNX4-204ENST00000473417 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.87■□□□□ 0.93
SNX4-204ENST00000473417 UNC80Q8N2C7 3258 aa20.87■□□□□ 0.93
SNX4-204ENST00000473417 CHD9Q3L8U1 2897 aa20.86■□□□□ 0.93
SNX4-204ENST00000473417 A6NJR5 290 aa20.86■□□□□ 0.93
SNX4-204ENST00000473417 B4GALT4O60513 344 aa20.86■□□□□ 0.93
SNX4-204ENST00000473417 TXNP10599 105 aaKnown RBP20.86■□□□□ 0.93
SNX4-204ENST00000473417 CSF2RAP15509 400 aa20.86■□□□□ 0.93
SNX4-204ENST00000473417 HSD17B4P51659 736 aa20.86■□□□□ 0.93
SNX4-204ENST00000473417 TTLL4Q14679 1199 aa20.86■□□□□ 0.93
SNX4-204ENST00000473417 CCDC62Q6P9F0 684 aa20.86■□□□□ 0.93
SNX4-204ENST00000473417 C16orf59Q7L2K0 433 aa20.86■□□□□ 0.93
SNX4-204ENST00000473417 CCDC82Q8N4S0 544 aa20.86■□□□□ 0.93
SNX4-204ENST00000473417 SRBD1Q8N5C6 995 aaKnown RBP20.86■□□□□ 0.93
SNX4-204ENST00000473417 COPS5Q92905 334 aa20.86■□□□□ 0.93
SNX4-204ENST00000473417 LZTS2Q9BRK4 669 aa20.86■□□□□ 0.93
SNX4-204ENST00000473417 AGXT2Q9BYV1 514 aa20.86■□□□□ 0.93
SNX4-204ENST00000473417 HIPK3Q9H422 1215 aa20.86■□□□□ 0.93
SNX4-204ENST00000473417 GOLGA8AA7E2F4 631 aa20.85■□□□□ 0.93
SNX4-204ENST00000473417 GOLGA8BA8MQT2 603 aa20.85■□□□□ 0.93
SNX4-204ENST00000473417 CFBP00751 764 aa20.85■□□□□ 0.93
SNX4-204ENST00000473417 MYL3P08590 195 aa20.85■□□□□ 0.93
SNX4-204ENST00000473417 CYP2C18P33260 490 aa20.85■□□□□ 0.93
SNX4-204ENST00000473417 RTN1Q16799 776 aa20.85■□□□□ 0.93
SNX4-204ENST00000473417 BRDTQ58F21 947 aaPredicted RBP20.85■□□□□ 0.93
SNX4-204ENST00000473417 FBXL16Q8N461 479 aa20.85■□□□□ 0.93
SNX4-204ENST00000473417 FAM161BQ96MY7 647 aa20.85■□□□□ 0.93
SNX4-204ENST00000473417 MTG1Q9BT17 334 aaPredicted RBP20.85■□□□□ 0.93
SNX4-204ENST00000473417 SPZ1Q9BXG8 430 aa20.85■□□□□ 0.93
SNX4-204ENST00000473417 TRPV6Q9H1D0 765 aa20.85■□□□□ 0.93
SNX4-204ENST00000473417 ALDH8A1Q9H2A2 487 aaPredicted RBP20.85■□□□□ 0.93
SNX4-204ENST00000473417 PDRG1Q9NUG6 133 aa20.85■□□□□ 0.93
SNX4-204ENST00000473417 UMODL1Q5DID0 1318 aa20.84■□□□□ 0.93
SNX4-204ENST00000473417 DOCK5Q9H7D0 1870 aa20.84■□□□□ 0.93
SNX4-204ENST00000473417 SMARCA1P28370 1054 aa20.84■□□□□ 0.93
SNX4-204ENST00000473417 TOB2Q14106 344 aaPredicted RBP20.84■□□□□ 0.93
SNX4-204ENST00000473417 STXBP2Q15833 593 aa20.84■□□□□ 0.93
SNX4-204ENST00000473417 TMEM240Q5SV17 173 aa20.84■□□□□ 0.93
SNX4-204ENST00000473417 RASIP1Q5U651 963 aa20.84■□□□□ 0.93
SNX4-204ENST00000473417 TMTC3Q6ZXV5 915 aa20.84■□□□□ 0.93
SNX4-204ENST00000473417 RRP36Q96EU6 259 aaKnown RBP20.84■□□□□ 0.93
SNX4-204ENST00000473417 LARP6Q9BRS8 491 aaKnown RBP20.84■□□□□ 0.93
SNX4-204ENST00000473417 NOC4LQ9BVI4 516 aaKnown RBP20.84■□□□□ 0.93
SNX4-204ENST00000473417 PXMP2Q9NR77 195 aa20.84■□□□□ 0.93
SNX4-204ENST00000473417 RBM28Q9NW13 759 aaKnown RBP20.84■□□□□ 0.93
SNX4-204ENST00000473417 MAP3K20Q9NYL2 800 aaKnown RBP20.84■□□□□ 0.93
SNX4-204ENST00000473417 TRIP12Q14669 1992 aaPredicted RBP20.84■□□□□ 0.93
SNX4-204ENST00000473417 PNMA6FA0A0J9YX94 578 aa20.83■□□□□ 0.93
SNX4-204ENST00000473417 KPNA6O60684 536 aa20.83■□□□□ 0.93
SNX4-204ENST00000473417 EIF2AK2P19525 551 aaKnown RBP20.83■□□□□ 0.93
SNX4-204ENST00000473417 METAP2P50579 478 aaKnown RBP eCLIP20.83■□□□□ 0.93
SNX4-204ENST00000473417 ARHGEF16Q5VV41 709 aa20.83■□□□□ 0.93
SNX4-204ENST00000473417 PSRC1Q6PGN9 363 aaPredicted RBP20.83■□□□□ 0.93
SNX4-204ENST00000473417 TTYH1Q9H313 450 aaPredicted RBP20.83■□□□□ 0.93
SNX4-204ENST00000473417 IL23AQ9NPF7 189 aa20.83■□□□□ 0.93
SNX4-204ENST00000473417 PCDHA1Q9Y5I3 950 aa20.83■□□□□ 0.93
SNX4-204ENST00000473417 TMEM265A0A087WTH1 108 aa20.82■□□□□ 0.92
SNX4-204ENST00000473417 DLL1O00548 723 aa20.82■□□□□ 0.92
SNX4-204ENST00000473417 CDC27P30260 824 aa20.82■□□□□ 0.92
SNX4-204ENST00000473417 ARHGAP1Q07960 439 aa20.82■□□□□ 0.92
SNX4-204ENST00000473417 SEPT14Q6ZU15 432 aa20.82■□□□□ 0.92
SNX4-204ENST00000473417 SAMD3Q8N6K7 520 aa20.82■□□□□ 0.92
SNX4-204ENST00000473417 WNT8AQ9H1J5 351 aa20.82■□□□□ 0.92
SNX4-204ENST00000473417 SEMA6BQ9H3T3 888 aa20.82■□□□□ 0.92
SNX4-204ENST00000473417 FAM217BQ9NTX9 383 aaPredicted RBP20.82■□□□□ 0.92
SNX4-204ENST00000473417 CUL9Q8IWT3 2517 aa20.82■□□□□ 0.92
SNX4-204ENST00000473417 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.81■□□□□ 0.92
SNX4-204ENST00000473417 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.81■□□□□ 0.92
SNX4-204ENST00000473417 hCG_1642624A0A1W2PR95 340 aa20.81■□□□□ 0.92
SNX4-204ENST00000473417 EIF3JO75822 258 aaKnown RBP20.81■□□□□ 0.92
SNX4-204ENST00000473417 GH1P01241 217 aa20.81■□□□□ 0.92
SNX4-204ENST00000473417 NR3C2P08235 984 aa20.81■□□□□ 0.92
SNX4-204ENST00000473417 ACRP10323 421 aa20.81■□□□□ 0.92
SNX4-204ENST00000473417 ADD1P35611 737 aaKnown RBP20.81■□□□□ 0.92
SNX4-204ENST00000473417 RCAN1P53805 252 aa20.81■□□□□ 0.92
SNX4-204ENST00000473417 TRAF1Q13077 416 aa20.81■□□□□ 0.92
SNX4-204ENST00000473417 LY6KQ17RY6 165 aa20.81■□□□□ 0.92
SNX4-204ENST00000473417 ZNF365Q70YC5 407 aa20.81■□□□□ 0.92
SNX4-204ENST00000473417 IL17RAQ96F46 866 aa20.81■□□□□ 0.92
SNX4-204ENST00000473417 PDCD2LQ9BRP1 358 aa20.81■□□□□ 0.92
SNX4-204ENST00000473417 TRMT13Q9NUP7 481 aaKnown RBP20.81■□□□□ 0.92
SNX4-204ENST00000473417 SEC63Q9UGP8 760 aaKnown RBP20.81■□□□□ 0.92
SNX4-204ENST00000473417 MMP3P08254 477 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms