RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 NFIBO00712 420 aa16.45■□□□□ 0.22
HIF3A-206ENST00000472815 ITGBL1O95965 494 aaPredicted RBP16.45■□□□□ 0.22
HIF3A-206ENST00000472815 CDC25AP30304 524 aa16.45■□□□□ 0.22
HIF3A-206ENST00000472815 AFMP43652 599 aa16.45■□□□□ 0.22
HIF3A-206ENST00000472815 LDLRAD1Q5T700 205 aa16.45■□□□□ 0.22
HIF3A-206ENST00000472815 HAUS3Q68CZ6 603 aa16.45■□□□□ 0.22
HIF3A-206ENST00000472815 PDXDC2PQ6P474 469 aa16.45■□□□□ 0.22
HIF3A-206ENST00000472815 RNF207Q6ZRF8 634 aa16.45■□□□□ 0.22
HIF3A-206ENST00000472815 SH3RF1Q7Z6J0 888 aa16.45■□□□□ 0.22
HIF3A-206ENST00000472815 REPS2Q8NFH8 660 aa16.45■□□□□ 0.22
HIF3A-206ENST00000472815 HAS1Q92839 578 aa16.45■□□□□ 0.22
HIF3A-206ENST00000472815 OPTNQ96CV9 577 aa16.45■□□□□ 0.22
HIF3A-206ENST00000472815 NT5C3AQ9H0P0 336 aa16.45■□□□□ 0.22
HIF3A-206ENST00000472815 CBX8Q9HC52 389 aa16.45■□□□□ 0.22
HIF3A-206ENST00000472815 RMND1Q9NWS8 449 aa16.45■□□□□ 0.22
HIF3A-206ENST00000472815 BIN1O00499 593 aa16.44■□□□□ 0.22
HIF3A-206ENST00000472815 GTPBP6O43824 516 aaPredicted RBP16.44■□□□□ 0.22
HIF3A-206ENST00000472815 CEP55Q53EZ4 464 aa16.44■□□□□ 0.22
HIF3A-206ENST00000472815 SPATA20Q8TB22 786 aa16.44■□□□□ 0.22
HIF3A-206ENST00000472815 ETNPPLQ8TBG4 499 aa16.44■□□□□ 0.22
HIF3A-206ENST00000472815 SNX29Q8TEQ0 813 aa16.44■□□□□ 0.22
HIF3A-206ENST00000472815 TBC1D5Q92609 795 aa16.44■□□□□ 0.22
HIF3A-206ENST00000472815 CCDC47Q96A33 483 aaKnown RBP16.44■□□□□ 0.22
HIF3A-206ENST00000472815 CLMNQ96JQ2 1002 aa16.44■□□□□ 0.22
HIF3A-206ENST00000472815 P2RX7Q99572 595 aaKnown RBP16.44■□□□□ 0.22
HIF3A-206ENST00000472815 LRRC27Q9C0I9 530 aa16.44■□□□□ 0.22
HIF3A-206ENST00000472815 ACAD9Q9H845 621 aa16.44■□□□□ 0.22
HIF3A-206ENST00000472815 ZNF408Q9H9D4 720 aa16.44■□□□□ 0.22
HIF3A-206ENST00000472815 ZNF214Q9UL59 606 aaPredicted RBP16.44■□□□□ 0.22
HIF3A-206ENST00000472815 AGTPBP1Q9UPW5 1226 aa16.44■□□□□ 0.22
HIF3A-206ENST00000472815 PP2D1A8MPX8 630 aa16.43■□□□□ 0.22
HIF3A-206ENST00000472815 SMTNL1A8MU46 457 aa16.43■□□□□ 0.22
HIF3A-206ENST00000472815 FAM86B1E9PN63 330 aa16.43■□□□□ 0.22
HIF3A-206ENST00000472815 FAM86B2P0C5J1 330 aa16.43■□□□□ 0.22
HIF3A-206ENST00000472815 STAT3P40763 770 aa16.43■□□□□ 0.22
HIF3A-206ENST00000472815 SARSP49591 514 aaKnown RBP16.43■□□□□ 0.22
HIF3A-206ENST00000472815 FSTL1Q12841 308 aa16.43■□□□□ 0.22
HIF3A-206ENST00000472815 SNAPC2Q13487 334 aa16.43■□□□□ 0.22
HIF3A-206ENST00000472815 CT47A1Q5JQC4 288 aaPredicted RBP16.43■□□□□ 0.22
HIF3A-206ENST00000472815 MLKLQ8NB16 471 aa16.43■□□□□ 0.22
HIF3A-206ENST00000472815 CHST13Q8NET6 341 aa16.43■□□□□ 0.22
HIF3A-206ENST00000472815 GTPBP4Q9BZE4 634 aaKnown RBP16.43■□□□□ 0.22
HIF3A-206ENST00000472815 FBXO40Q9UH90 709 aa16.43■□□□□ 0.22
HIF3A-206ENST00000472815 POTEMA6NI47 508 aa16.42■□□□□ 0.22
HIF3A-206ENST00000472815 TRAF5O00463 557 aa16.42■□□□□ 0.22
HIF3A-206ENST00000472815 PLCG1P19174 1290 aa16.42■□□□□ 0.22
HIF3A-206ENST00000472815 OSBPP22059 807 aa16.42■□□□□ 0.22
HIF3A-206ENST00000472815 COPB2P35606 906 aa16.42■□□□□ 0.22
HIF3A-206ENST00000472815 RPS6P62753 249 aaKnown RBP16.42■□□□□ 0.22
HIF3A-206ENST00000472815 DPYDQ12882 1025 aa16.42■□□□□ 0.22
HIF3A-206ENST00000472815 PLS1Q14651 629 aa16.42■□□□□ 0.22
HIF3A-206ENST00000472815 TMEM132BQ14DG7 1078 aa16.42■□□□□ 0.22
HIF3A-206ENST00000472815 DPCR1Q3MIW9 517 aa16.42■□□□□ 0.22
HIF3A-206ENST00000472815 MUM1L1Q5H9M0 696 aa16.42■□□□□ 0.22
HIF3A-206ENST00000472815 XRRA1Q6P2D8 792 aa16.42■□□□□ 0.22
HIF3A-206ENST00000472815 NSMFQ6X4W1 530 aa16.42■□□□□ 0.22
HIF3A-206ENST00000472815 LBX2Q6XYB7 198 aa16.42■□□□□ 0.22
HIF3A-206ENST00000472815 MOB2Q70IA6 237 aa16.42■□□□□ 0.22
HIF3A-206ENST00000472815 NIPA1Q7RTP0 329 aa16.42■□□□□ 0.22
HIF3A-206ENST00000472815 PLA2G4DQ86XP0 818 aa16.42■□□□□ 0.22
HIF3A-206ENST00000472815 C2orf69Q8N8R5 385 aa16.42■□□□□ 0.22
HIF3A-206ENST00000472815 CNKSR2Q8WXI2 1034 aa16.42■□□□□ 0.22
HIF3A-206ENST00000472815 RPTORQ8N122 1335 aa16.42■□□□□ 0.22
HIF3A-206ENST00000472815 A0A0G2JMZ2 1700 aa16.42■□□□□ 0.22
HIF3A-206ENST00000472815 FOXN1O15353 648 aa16.42■□□□□ 0.22
HIF3A-206ENST00000472815 PRR29P0C7W0 189 aa16.42■□□□□ 0.22
HIF3A-206ENST00000472815 TREML2Q5T2D2 321 aa16.42■□□□□ 0.22
HIF3A-206ENST00000472815 PCNX4Q63HM2 1172 aa16.42■□□□□ 0.22
HIF3A-206ENST00000472815 C11orf57Q6ZUT1 292 aaPredicted RBP16.42■□□□□ 0.22
HIF3A-206ENST00000472815 LUZP1Q86V48 1076 aa16.42■□□□□ 0.22
HIF3A-206ENST00000472815 KCTD17Q8N5Z5 321 aa16.42■□□□□ 0.22
HIF3A-206ENST00000472815 SYTL5Q8TDW5 730 aaPredicted RBP16.42■□□□□ 0.22
HIF3A-206ENST00000472815 GTF3C2Q8WUA4 911 aaPredicted RBP16.42■□□□□ 0.22
HIF3A-206ENST00000472815 LENG9Q96B70 501 aa16.42■□□□□ 0.22
HIF3A-206ENST00000472815 MAN1B1Q9UKM7 699 aa16.42■□□□□ 0.22
HIF3A-206ENST00000472815 PNMA3Q9UL41 463 aa16.42■□□□□ 0.22
HIF3A-206ENST00000472815 FRMPD4Q14CM0 1322 aa16.42■□□□□ 0.22
HIF3A-206ENST00000472815 IGLV3-22A0A075B6J6 115 aa16.41■□□□□ 0.22
HIF3A-206ENST00000472815 BCRP11274 1271 aa16.41■□□□□ 0.22
HIF3A-206ENST00000472815 SV2BQ7L1I2 683 aa16.41■□□□□ 0.22
HIF3A-206ENST00000472815 GRAMD1CQ8IYS0 662 aa16.41■□□□□ 0.22
HIF3A-206ENST00000472815 WNK4Q96J92 1243 aa16.41■□□□□ 0.22
HIF3A-206ENST00000472815 WDR11Q9BZH6 1224 aa16.41■□□□□ 0.22
HIF3A-206ENST00000472815 GBA2Q9HCG7 927 aaPredicted RBP16.41■□□□□ 0.22
HIF3A-206ENST00000472815 KBTBD4Q9NVX7 518 aa16.41■□□□□ 0.22
HIF3A-206ENST00000472815 MSH4O15457 936 aa16.4■□□□□ 0.22
HIF3A-206ENST00000472815 CCT6AP40227 531 aaKnown RBP16.4■□□□□ 0.22
HIF3A-206ENST00000472815 MORC3Q14149 939 aa16.4■□□□□ 0.22
HIF3A-206ENST00000472815 ARHGEF16Q5VV41 709 aa16.4■□□□□ 0.22
HIF3A-206ENST00000472815 RMDN3Q96TC7 470 aa16.4■□□□□ 0.22
HIF3A-206ENST00000472815 MXRA8Q9BRK3 442 aa16.4■□□□□ 0.22
HIF3A-206ENST00000472815 MMTAG2Q9BU76 263 aaKnown RBP16.4■□□□□ 0.22
HIF3A-206ENST00000472815 PASKQ96RG2 1323 aa16.4■□□□□ 0.22
HIF3A-206ENST00000472815 PFASO15067 1338 aa16.39■□□□□ 0.21
HIF3A-206ENST00000472815 MEIS1O00470 390 aa16.39■□□□□ 0.21
HIF3A-206ENST00000472815 IKBKBO14920 756 aa16.39■□□□□ 0.21
HIF3A-206ENST00000472815 PLCB2Q00722 1185 aa16.39■□□□□ 0.21
HIF3A-206ENST00000472815 IQCB1Q15051 598 aa16.39■□□□□ 0.21
HIF3A-206ENST00000472815 NAALADL2Q58DX5 795 aa16.39■□□□□ 0.21
HIF3A-206ENST00000472815 HYIQ5T013 277 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms