RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 CCT5P48643 541 aa14.73□□□□□ -0.05
SCAMP4-207ENST00000472442 TATDN1Q6P1N9 297 aa14.73□□□□□ -0.05
SCAMP4-207ENST00000472442 SIAH1Q8IUQ4 282 aa14.73□□□□□ -0.05
SCAMP4-207ENST00000472442 ZSCAN29Q8IWY8 852 aaPredicted RBP14.73□□□□□ -0.05
SCAMP4-207ENST00000472442 COA7Q96BR5 231 aa14.73□□□□□ -0.05
SCAMP4-207ENST00000472442 CHP1Q99653 195 aa14.73□□□□□ -0.05
SCAMP4-207ENST00000472442 JMJD4Q9H9V9 463 aa14.73□□□□□ -0.05
SCAMP4-207ENST00000472442 C6orf50Q9HD87 102 aa14.73□□□□□ -0.05
SCAMP4-207ENST00000472442 ATP1A1P05023 1023 aaKnown RBP14.73□□□□□ -0.05
SCAMP4-207ENST00000472442 LIG3P49916 1009 aa14.73□□□□□ -0.05
SCAMP4-207ENST00000472442 ATP2B2Q01814 1243 aa14.73□□□□□ -0.05
SCAMP4-207ENST00000472442 SUGP1Q8IWZ8 645 aaKnown RBP14.73□□□□□ -0.05
SCAMP4-207ENST00000472442 ADGRF4Q8IZF3 695 aa14.73□□□□□ -0.05
SCAMP4-207ENST00000472442 MYCBPQ99417 103 aaPredicted RBP14.73□□□□□ -0.05
SCAMP4-207ENST00000472442 MTRQ99707 1265 aa14.73□□□□□ -0.05
SCAMP4-207ENST00000472442 CRACR2AQ9BSW2 395 aa14.73□□□□□ -0.05
SCAMP4-207ENST00000472442 TAB2Q9NYJ8 693 aa14.73□□□□□ -0.05
SCAMP4-207ENST00000472442 TFR2Q9UP52 801 aa14.73□□□□□ -0.05
SCAMP4-207ENST00000472442 MYH4Q9Y623 1939 aa14.73□□□□□ -0.05
SCAMP4-207ENST00000472442 PPP1R11O60927 126 aaPredicted RBP14.73□□□□□ -0.05
SCAMP4-207ENST00000472442 MYBL2P10244 700 aa14.73□□□□□ -0.05
SCAMP4-207ENST00000472442 GNA11P29992 359 aa14.73□□□□□ -0.05
SCAMP4-207ENST00000472442 CERKLQ49MI3 558 aaPredicted RBP14.73□□□□□ -0.05
SCAMP4-207ENST00000472442 CT47A1Q5JQC4 288 aaPredicted RBP14.73□□□□□ -0.05
SCAMP4-207ENST00000472442 STAMQ92783 540 aa14.73□□□□□ -0.05
SCAMP4-207ENST00000472442 RABEP2Q9H5N1 569 aa14.73□□□□□ -0.05
SCAMP4-207ENST00000472442 ZNF277Q9NRM2 450 aaPredicted RBP14.73□□□□□ -0.05
SCAMP4-207ENST00000472442 ESYT2A0FGR8 921 aa14.72□□□□□ -0.05
SCAMP4-207ENST00000472442 MCM3P25205 808 aa14.72□□□□□ -0.05
SCAMP4-207ENST00000472442 SLC16A2P36021 539 aa14.72□□□□□ -0.05
SCAMP4-207ENST00000472442 PDXDC2PQ6P474 469 aa14.72□□□□□ -0.05
SCAMP4-207ENST00000472442 KCTD1Q719H9 257 aa14.72□□□□□ -0.05
SCAMP4-207ENST00000472442 KAT2BQ92831 832 aa14.72□□□□□ -0.05
SCAMP4-207ENST00000472442 TMEM260Q9NX78 707 aa14.72□□□□□ -0.05
SCAMP4-207ENST00000472442 BIN2Q9UBW5 565 aaPredicted RBP14.72□□□□□ -0.05
SCAMP4-207ENST00000472442 SHOX2O60902 331 aaPredicted RBP14.72□□□□□ -0.05
SCAMP4-207ENST00000472442 ERLIN2O94905 339 aa14.72□□□□□ -0.05
SCAMP4-207ENST00000472442 NDUFA10O95299 355 aa14.72□□□□□ -0.05
SCAMP4-207ENST00000472442 EEF2P13639 858 aaKnown RBP14.72□□□□□ -0.05
SCAMP4-207ENST00000472442 LONP1P36776 959 aaKnown RBP14.72□□□□□ -0.05
SCAMP4-207ENST00000472442 JAG1P78504 1218 aa14.72□□□□□ -0.05
SCAMP4-207ENST00000472442 SF3B2Q13435 895 aaKnown RBP14.72□□□□□ -0.05
SCAMP4-207ENST00000472442 KRT25Q7Z3Z0 450 aa14.72□□□□□ -0.05
SCAMP4-207ENST00000472442 FAM76AQ8TAV0 307 aa14.72□□□□□ -0.05
SCAMP4-207ENST00000472442 PSMD1Q99460 953 aa14.72□□□□□ -0.05
SCAMP4-207ENST00000472442 SAR1BQ9Y6B6 198 aa14.72□□□□□ -0.05
SCAMP4-207ENST00000472442 EPN1Q9Y6I3 576 aaPredicted RBP14.72□□□□□ -0.05
SCAMP4-207ENST00000472442 PSME4Q14997 1843 aa14.72□□□□□ -0.05
SCAMP4-207ENST00000472442 AGPSO00116 658 aa14.71□□□□□ -0.05
SCAMP4-207ENST00000472442 PSMD14O00487 310 aa14.71□□□□□ -0.05
SCAMP4-207ENST00000472442 RAD17O75943 681 aa14.71□□□□□ -0.05
SCAMP4-207ENST00000472442 NONOQ15233 471 aaKnown RBP eCLIP14.71□□□□□ -0.05
SCAMP4-207ENST00000472442 SOGA3Q5TF21 947 aa14.71□□□□□ -0.05
SCAMP4-207ENST00000472442 MCTP2Q6DN12 878 aa14.71□□□□□ -0.05
SCAMP4-207ENST00000472442 RTKN2Q8IZC4 609 aa14.71□□□□□ -0.05
SCAMP4-207ENST00000472442 GPATCH11Q8N954 259 aa14.71□□□□□ -0.05
SCAMP4-207ENST00000472442 MKL1Q969V6 931 aa14.71□□□□□ -0.05
SCAMP4-207ENST00000472442 SELENOOQ9BVL4 669 aa14.71□□□□□ -0.05
SCAMP4-207ENST00000472442 ATRNL1Q5VV63 1379 aa14.71□□□□□ -0.05
SCAMP4-207ENST00000472442 PP2D1A8MPX8 630 aa14.71□□□□□ -0.05
SCAMP4-207ENST00000472442 EDIL3O43854 480 aa14.71□□□□□ -0.05
SCAMP4-207ENST00000472442 COPB1P53618 953 aaKnown RBP14.71□□□□□ -0.05
SCAMP4-207ENST00000472442 RRP1BQ14684 758 aaKnown RBP14.71□□□□□ -0.05
SCAMP4-207ENST00000472442 SEPT2Q15019 361 aa14.71□□□□□ -0.05
SCAMP4-207ENST00000472442 RSBN1LQ6PCB5 846 aaPredicted RBP14.71□□□□□ -0.05
SCAMP4-207ENST00000472442 DTHD1Q6ZMT9 781 aa14.71□□□□□ -0.05
SCAMP4-207ENST00000472442 PAXIP1Q6ZW49 1069 aaPredicted RBP14.71□□□□□ -0.05
SCAMP4-207ENST00000472442 GMLQ99445 158 aa14.71□□□□□ -0.05
SCAMP4-207ENST00000472442 FAM107BQ9H098 131 aa14.71□□□□□ -0.05
SCAMP4-207ENST00000472442 GOLGA6CA6NDK9 693 aa14.7□□□□□ -0.06
SCAMP4-207ENST00000472442 USP17L10C9JJH3 530 aa14.7□□□□□ -0.06
SCAMP4-207ENST00000472442 hCG_1984214I3L0E3 225 aa14.7□□□□□ -0.06
SCAMP4-207ENST00000472442 GOLGA6DP0CG33 693 aa14.7□□□□□ -0.06
SCAMP4-207ENST00000472442 LETM2Q2VYF4 491 aa14.7□□□□□ -0.06
SCAMP4-207ENST00000472442 ZNF713Q8N859 430 aaPredicted RBP14.7□□□□□ -0.06
SCAMP4-207ENST00000472442 TBCKQ8TEA7 893 aa14.7□□□□□ -0.06
SCAMP4-207ENST00000472442 GSDMAQ96QA5 445 aa14.7□□□□□ -0.06
SCAMP4-207ENST00000472442 GOLGA6AQ9NYA3 693 aa14.7□□□□□ -0.06
SCAMP4-207ENST00000472442 LIMA1Q9UHB6 759 aaKnown RBP14.7□□□□□ -0.06
SCAMP4-207ENST00000472442 FAM169AQ9Y6X4 670 aa14.7□□□□□ -0.06
SCAMP4-207ENST00000472442 UTRNP46939 3433 aa14.7□□□□□ -0.06
SCAMP4-207ENST00000472442 PNMA6FA0A0J9YX94 578 aa14.7□□□□□ -0.06
SCAMP4-207ENST00000472442 CCNT1O60563 726 aaKnown RBP14.7□□□□□ -0.06
SCAMP4-207ENST00000472442 GDF11O95390 407 aa14.7□□□□□ -0.06
SCAMP4-207ENST00000472442 VIL1P09327 827 aaKnown RBP14.7□□□□□ -0.06
SCAMP4-207ENST00000472442 IRAK1P51617 712 aa14.7□□□□□ -0.06
SCAMP4-207ENST00000472442 GPATCH4Q5T3I0 446 aaKnown RBP14.7□□□□□ -0.06
SCAMP4-207ENST00000472442 REXO1Q8N1G1 1221 aaKnown RBP14.7□□□□□ -0.06
SCAMP4-207ENST00000472442 MTMR8Q96EF0 704 aa14.7□□□□□ -0.06
SCAMP4-207ENST00000472442 KANSL2Q9H9L4 492 aa14.7□□□□□ -0.06
SCAMP4-207ENST00000472442 NYAP2Q9P242 653 aa14.7□□□□□ -0.06
SCAMP4-207ENST00000472442 TARSL2A2RTX5 802 aaKnown RBP14.7□□□□□ -0.06
SCAMP4-207ENST00000472442 ENTPD3O75355 529 aa14.7□□□□□ -0.06
SCAMP4-207ENST00000472442 CCDC96Q2M329 555 aa14.7□□□□□ -0.06
SCAMP4-207ENST00000472442 GRIPAP1Q4V328 841 aa14.7□□□□□ -0.06
SCAMP4-207ENST00000472442 NEK8Q86SG6 692 aa14.7□□□□□ -0.06
SCAMP4-207ENST00000472442 LARGE2Q8N3Y3 721 aa14.7□□□□□ -0.06
SCAMP4-207ENST00000472442 HINFPQ9BQA5 517 aa14.7□□□□□ -0.06
SCAMP4-207ENST00000472442 BLZF1Q9H2G9 400 aa14.7□□□□□ -0.06
SCAMP4-207ENST00000472442 ZBTB12Q9Y330 459 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms