RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 PEX19P40855 299 aa14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 KRT27Q7Z3Y8 459 aa14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 KCTD6Q8NC69 237 aa14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 ERO1AQ96HE7 468 aa14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 SLC52A2Q9HAB3 445 aa14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 DAAM1Q9Y4D1 1078 aa14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 H3BRJ5 948 aa14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 CLIC2O15247 247 aa14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 XPOTO43592 962 aaKnown RBP14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 SEC24BO95487 1268 aa14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 VCPP55072 806 aaKnown RBP14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 IRX4P78413 519 aa14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 NSUN2Q08J23 767 aaKnown RBP eCLIP14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 ZC3H12BQ5HYM0 836 aaKnown RBP14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 TRIM59Q8IWR1 403 aa14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 LLPHQ9BRT6 129 aaKnown RBP14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 PIDD1Q9HB75 910 aa14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 EPS15L1Q9UBC2 864 aa14.36□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 GADD45BO75293 160 aaPredicted RBP14.35□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 ESRRBO95718 433 aa14.35□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 GCKRQ14397 625 aa14.35□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 ARPP21Q9UBL0 812 aaPredicted RBP14.35□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 INTUQ9ULD6 942 aa14.35□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 MYO1FO00160 1098 aa14.35□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 CPP00450 1065 aa14.35□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 KCTD16Q68DU8 428 aa14.35□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 PPHLN1Q8NEY8 458 aaKnown RBP14.35□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 PIP4K2CQ8TBX8 421 aa14.35□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 QTRT2Q9H974 415 aaKnown RBP14.35□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 ZKSCAN8Q15776 578 aaPredicted RBP14.35□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.35□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 RIPOR2Q9Y4F9 1068 aa14.35□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 HLA-DPA1P20036 260 aa14.35□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 BASP1P80723 227 aaKnown RBP14.35□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 KCNA1Q09470 495 aa14.35□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 MTERF2Q49AM1 385 aa14.35□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 GEMIN8Q9NWZ8 242 aaKnown RBP14.35□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 PNMA6EA0A0J9YXQ4 647 aa14.35□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 OAS2P29728 719 aaKnown RBP14.35□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 MYL7Q01449 175 aa14.35□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 EHHADHQ08426 723 aa14.35□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 ZNF513Q8N8E2 541 aaPredicted RBP14.35□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 STAG1Q8WVM7 1258 aa14.35□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 BRD2P25440 801 aaKnown RBP14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 RASSF7Q02833 373 aa14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 YWHAHQ04917 246 aaPredicted RBP14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 TAF11Q15544 211 aa14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 ELMSAN1Q6PJG2 1045 aa14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 MIS12Q9H081 205 aa14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 KDM5BQ9UGL1 1544 aa14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 STX1BP61266 288 aa14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 TFDP1Q14186 410 aa14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 CAPRIN1Q14444 709 aaKnown RBP14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 TTLL7Q6ZT98 887 aa14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 PCGF5Q86SE9 256 aa14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 PPP1R14AQ96A00 147 aa14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 YIPF2Q9BWQ6 316 aa14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 KMT5AQ9NQR1 393 aa14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 TYW1Q9NV66 732 aaKnown RBP14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 TSPOAP1O95153 1857 aa14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 ARMC9Q7Z3E5 817 aa14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 OGFRQ9NZT2 677 aa14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 WDR64B1ANS9 1081 aa14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 NEK8Q86SG6 692 aa14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 OTULINQ96BN8 352 aa14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 INTS4Q96HW7 963 aaKnown RBP14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 TOM1L1O75674 476 aa14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 BRD1O95696 1058 aa14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 ADD1P35611 737 aaKnown RBP14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 ARHGDIAP52565 204 aa14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 ACCSLQ4AC99 568 aa14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 BBOF1Q8ND07 529 aa14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 MAGOHBQ96A72 148 aaKnown RBP14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 CEP170P1Q96L14 293 aa14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 PALD1Q9ULE6 856 aa14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 PCF11O94913 1555 aaKnown RBP14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 NCF2P19878 526 aaPredicted RBP14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 ZBTB17Q13105 803 aa14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 PTK2BQ14289 1009 aa14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 EXOC3L4Q17RC7 722 aa14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 XPO4Q9C0E2 1151 aaKnown RBP14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 SARS2Q9NP81 518 aaKnown RBP14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 HOMER3Q9NSC5 361 aa14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 FAF1Q9UNN5 650 aaPredicted RBP14.34□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 HIP1RO75146 1068 aa14.33□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 MYL3P08590 195 aa14.33□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 DSTYKQ6XUX3 929 aa14.33□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 KRT26Q7Z3Y9 468 aa14.33□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 CROCCP2Q86T23 111 aa14.33□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 MAP7D3Q8IWC1 876 aa14.33□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 SNX19Q92543 992 aa14.33□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 CEP19Q96LK0 163 aa14.33□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 TSKSQ9UJT2 592 aa14.33□□□□□ -0.11
NPHP3-ACAD11-201ENST00000471702 SUPT3HB4E1H0 165 aa14.33□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 SNAP25P60880 206 aa14.33□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 OCRLQ01968 901 aa14.33□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 PTGDRQ13258 359 aa14.33□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 SPOPLQ6IQ16 392 aa14.33□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 COL4A3BPQ9Y5P4 624 aa14.33□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 CAPN7Q9Y6W3 813 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms