RNA–Protein interactions for RNA: ENST00000471247.5

CCNL1-214, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,671 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-214ENST00000471247 SUDS3Q9H7L9 328 aaPredicted RBP3.29□□□□□ -1.88
CCNL1-214ENST00000471247 NOP53Q9NZM5 478 aaKnown RBP3.29□□□□□ -1.88
CCNL1-214ENST00000471247 SUFUQ9UMX1 484 aa3.29□□□□□ -1.88
CCNL1-214ENST00000471247 THSD7BQ9C0I4 1608 aa3.29□□□□□ -1.88
CCNL1-214ENST00000471247 SPATA31C1P0DKV0 1188 aa3.29□□□□□ -1.88
CCNL1-214ENST00000471247 EIF2S2P20042 333 aaKnown RBP3.29□□□□□ -1.88
CCNL1-214ENST00000471247 CD68P34810 354 aaPredicted RBP3.29□□□□□ -1.88
CCNL1-214ENST00000471247 USP8P40818 1118 aa3.29□□□□□ -1.88
CCNL1-214ENST00000471247 CRKP46108 304 aa3.29□□□□□ -1.88
CCNL1-214ENST00000471247 RARSP54136 660 aaKnown RBP3.29□□□□□ -1.88
CCNL1-214ENST00000471247 CABP4P57796 275 aa3.29□□□□□ -1.88
CCNL1-214ENST00000471247 TPM4P67936 248 aa3.29□□□□□ -1.88
CCNL1-214ENST00000471247 FAM160A1Q05DH4 1040 aa3.29□□□□□ -1.88
CCNL1-214ENST00000471247 NOLC1Q14978 699 aaKnown RBP eCLIP3.29□□□□□ -1.886e-7■■■■□ 22.4
CCNL1-214ENST00000471247 NFE2L2Q16236 605 aa3.29□□□□□ -1.88
CCNL1-214ENST00000471247 ICE2Q659A1 982 aa3.29□□□□□ -1.88
CCNL1-214ENST00000471247 LSRQ86X29 649 aaPredicted RBP3.29□□□□□ -1.88
CCNL1-214ENST00000471247 GALNT6Q8NCL4 622 aa3.29□□□□□ -1.88
CCNL1-214ENST00000471247 SYTL4Q96C24 671 aaPredicted RBP3.29□□□□□ -1.88
CCNL1-214ENST00000471247 FMNL2Q96PY5 1086 aa3.29□□□□□ -1.88
CCNL1-214ENST00000471247 NACC1Q96RE7 527 aa3.29□□□□□ -1.88
CCNL1-214ENST00000471247 ACSS3Q9H6R3 686 aa3.29□□□□□ -1.88
CCNL1-214ENST00000471247 ATG3Q9NT62 314 aa3.29□□□□□ -1.88
CCNL1-214ENST00000471247 ZNF214Q9UL59 606 aaPredicted RBP3.29□□□□□ -1.88
CCNL1-214ENST00000471247 INPP5FQ9Y2H2 1132 aa3.29□□□□□ -1.88
CCNL1-214ENST00000471247 A0A1B0GUL7 405 aa3.29□□□□□ -1.88
CCNL1-214ENST00000471247 SLC22A31A6NKX4 558 aa3.29□□□□□ -1.88
CCNL1-214ENST00000471247 EIF4E1BA6NMX2 242 aaKnown RBP3.29□□□□□ -1.88
CCNL1-214ENST00000471247 M0R082 166 aa3.29□□□□□ -1.88
CCNL1-214ENST00000471247 IPO8O15397 1037 aaKnown RBP3.29□□□□□ -1.88
CCNL1-214ENST00000471247 NME1P15531 152 aaKnown RBP3.29□□□□□ -1.88
CCNL1-214ENST00000471247 CAPN2P17655 700 aa3.29□□□□□ -1.88
CCNL1-214ENST00000471247 EIF2AK2P19525 551 aaKnown RBP3.29□□□□□ -1.88
CCNL1-214ENST00000471247 SF3A3Q12874 501 aaKnown RBP eCLIP3.29□□□□□ -1.883e-23■■□□□ 11.8
CCNL1-214ENST00000471247 CWF19L2Q2TBE0 894 aaKnown RBP3.29□□□□□ -1.88
CCNL1-214ENST00000471247 RNF187Q5TA31 235 aaPredicted RBP3.29□□□□□ -1.88
CCNL1-214ENST00000471247 TMEM132EQ6IEE7 984 aa3.29□□□□□ -1.88
CCNL1-214ENST00000471247 C2CD4AQ8NCU7 369 aaPredicted RBP3.29□□□□□ -1.88
CCNL1-214ENST00000471247 DNAJB8Q8NHS0 232 aa3.29□□□□□ -1.88
CCNL1-214ENST00000471247 ZNF417Q8TAU3 575 aa3.29□□□□□ -1.88
CCNL1-214ENST00000471247 PHACTR3Q96KR7 559 aa3.29□□□□□ -1.88
CCNL1-214ENST00000471247 PRAM1Q96QH2 718 aa3.29□□□□□ -1.88
CCNL1-214ENST00000471247 ZNF587Q96SQ5 575 aaPredicted RBP3.29□□□□□ -1.88
CCNL1-214ENST00000471247 C22orf23Q9BZE7 217 aa3.29□□□□□ -1.88
CCNL1-214ENST00000471247 MIR1-1HGQ9H1L0 117 aa3.29□□□□□ -1.88
CCNL1-214ENST00000471247 OSBPL2Q9H1P3 480 aa3.29□□□□□ -1.88
CCNL1-214ENST00000471247 PLEKHA4Q9H4M7 779 aa3.29□□□□□ -1.88
CCNL1-214ENST00000471247 ZKSCAN5Q9Y2L8 839 aa3.29□□□□□ -1.88
CCNL1-214ENST00000471247 BRCA2P51587 3418 aa3.28□□□□□ -1.88
CCNL1-214ENST00000471247 CCP110O43303 1012 aa3.28□□□□□ -1.88
CCNL1-214ENST00000471247 KIAA0754O94854 1291 aa3.28□□□□□ -1.88
CCNL1-214ENST00000471247 ATP2B1P20020 1258 aa3.28□□□□□ -1.88
CCNL1-214ENST00000471247 CLNS1AP54105 237 aaKnown RBP3.28□□□□□ -1.88
CCNL1-214ENST00000471247 ID3Q02535 119 aa3.28□□□□□ -1.88
CCNL1-214ENST00000471247 MLLT1Q03111 559 aaPredicted RBP3.28□□□□□ -1.88
CCNL1-214ENST00000471247 CLCQ05315 142 aa3.28□□□□□ -1.88
CCNL1-214ENST00000471247 HDAC1Q13547 482 aaPredicted RBP3.28□□□□□ -1.88
CCNL1-214ENST00000471247 TMCO3Q6UWJ1 677 aa3.28□□□□□ -1.88
CCNL1-214ENST00000471247 ARMC9Q7Z3E5 817 aa3.28□□□□□ -1.88
CCNL1-214ENST00000471247 GAS2L3Q86XJ1 694 aa3.28□□□□□ -1.88
CCNL1-214ENST00000471247 CCDC146Q8IYE0 955 aa3.28□□□□□ -1.88
CCNL1-214ENST00000471247 GPBAR1Q8TDU6 330 aa3.28□□□□□ -1.88
CCNL1-214ENST00000471247 NCAPGQ9BPX3 1015 aa3.28□□□□□ -1.88
CCNL1-214ENST00000471247 ZBTB40Q9NUA8 1239 aa3.28□□□□□ -1.88
CCNL1-214ENST00000471247 PPP1R1BQ9UD71 204 aaPredicted RBP3.28□□□□□ -1.88
CCNL1-214ENST00000471247 MKL2Q9ULH7 1088 aa3.28□□□□□ -1.88
CCNL1-214ENST00000471247 PLXNB2O15031 1838 aa3.28□□□□□ -1.88
CCNL1-214ENST00000471247 MAP3K19Q56UN5 1328 aa3.28□□□□□ -1.88
CCNL1-214ENST00000471247 DNAJC25-GNG10A0A024R161 153 aa3.28□□□□□ -1.88
CCNL1-214ENST00000471247 RGS13O14921 159 aa3.28□□□□□ -1.88
CCNL1-214ENST00000471247 SATB1Q01826 763 aa3.28□□□□□ -1.88
CCNL1-214ENST00000471247 PTPN11Q06124 597 aaPredicted RBP3.28□□□□□ -1.88
CCNL1-214ENST00000471247 FAM117BQ6P1L5 589 aa3.28□□□□□ -1.88
CCNL1-214ENST00000471247 SYT10Q6XYQ8 523 aa3.28□□□□□ -1.88
CCNL1-214ENST00000471247 ARHGEF25Q86VW2 580 aa3.28□□□□□ -1.88
CCNL1-214ENST00000471247 SCLT1Q96NL6 688 aa3.28□□□□□ -1.88
CCNL1-214ENST00000471247 NSUN5Q96P11 429 aaKnown RBP3.28□□□□□ -1.88
CCNL1-214ENST00000471247 ATXN3LQ9H3M9 355 aa3.28□□□□□ -1.88
CCNL1-214ENST00000471247 KCNK4Q9NYG8 393 aa3.28□□□□□ -1.88
CCNL1-214ENST00000471247 METTL12A8MUP2 240 aa3.28□□□□□ -1.89
CCNL1-214ENST00000471247 BECN2A8MW95 431 aa3.28□□□□□ -1.89
CCNL1-214ENST00000471247 VAMP4O75379 141 aa3.28□□□□□ -1.89
CCNL1-214ENST00000471247 RPSAP08865 295 aaKnown RBP3.28□□□□□ -1.89
CCNL1-214ENST00000471247 MCCP23508 829 aa3.28□□□□□ -1.89
CCNL1-214ENST00000471247 SLBPQ14493 270 aaKnown RBP eCLIP3.28□□□□□ -1.89
CCNL1-214ENST00000471247 EGFLAMQ63HQ2 1017 aa3.28□□□□□ -1.89
CCNL1-214ENST00000471247 CTR9Q6PD62 1173 aa3.28□□□□□ -1.89
CCNL1-214ENST00000471247 BNC2Q6ZN30 1099 aaPredicted RBP3.28□□□□□ -1.89
CCNL1-214ENST00000471247 HFE2Q6ZVN8 426 aa3.28□□□□□ -1.89
CCNL1-214ENST00000471247 HDXQ7Z353 690 aa3.28□□□□□ -1.89
CCNL1-214ENST00000471247 WAPLQ7Z5K2 1190 aa3.28□□□□□ -1.89
CCNL1-214ENST00000471247 MFSD2AQ8NA29 543 aa3.28□□□□□ -1.89
CCNL1-214ENST00000471247 PMFBP1Q8TBY8 1022 aa3.28□□□□□ -1.89
CCNL1-214ENST00000471247 GATA6Q92908 595 aa3.28□□□□□ -1.89
CCNL1-214ENST00000471247 LNPKQ9C0E8 428 aa3.28□□□□□ -1.89
CCNL1-214ENST00000471247 RMI1Q9H9A7 625 aa3.28□□□□□ -1.89
CCNL1-214ENST00000471247 TMEM165Q9HC07 324 aa3.28□□□□□ -1.89
CCNL1-214ENST00000471247 ST7Q9NRC1 585 aa3.28□□□□□ -1.89
CCNL1-214ENST00000471247 TMEM260Q9NX78 707 aa3.28□□□□□ -1.89
CCNL1-214ENST00000471247 TERF2IPQ9NYB0 399 aa3.28□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms